Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO173G0016 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 5.0e-96 354.4 172 100.0
SMO173G0029 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 1.3e-27 127.1 70 91.4
SMO173G0075 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 1.3e-27 127.1 70 91.4
SMO173G0086 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 1.7e-27 126.7 70 90.0
SMO146G0024 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 3.8e-27 125.6 70 90.0
SMO146G0193 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 7.2e-26 121.3 88 73.9
SMO173G0090 Selaginella moellendorffii HOM05D001329 ORTHO05D004946 2.3e-24 116.3 70 84.3
Pp3c1_36770 Physcomitrium patens HOM05D001329 ORTHO05D004946 2.5e-18 96.3 88 53.4
Mapoly0008s0091 Marchantia polymorpha HOM05D001329 ORTHO05D004946 9.4e-18 94.4 70 61.4
HPP92_003950 Vanilla planifolia HOM05D001329 ORTHO05D004946 1.1e-15 87.4 70 57.1
CBR_g52747 Chara braunii HOM05D001329 ORTHO05D004946 4.4e-15 85.5 70 52.9
Nn8g39015 Nelumbo nucifera HOM05D001329 ORTHO05D004946 4.8e-14 82.0 70 51.4
SEGI_18109 Sequoiadendron giganteum HOM05D001329 ORTHO05D004946 6.3e-14 81.6 85 47.1
Lalb_Chr24g0396201 Lupinus albus HOM05D001329 ORTHO05D004946 8.2e-14 81.3 87 40.2
HanXRQChr05g0139791 Helianthus annuus HOM05D001329 ORTHO05D004946 1.1e-13 80.9 77 50.6
ATR0705G162 Amborella trichopoda HOM05D001329 ORTHO05D004946 1.4e-13 80.5 70 51.4
Aqoxy7G03959 Aquilegia oxysepala HOM05D001329 ORTHO05D004946 1.8e-13 80.1 73 49.3
Lj3g0020598 Lotus japonicus HOM05D001329 ORTHO05D004946 1.8e-13 80.1 85 44.7
MCO02G474 Micromonas commoda HOM05D001329 ORTHO05D004946 1.8e-13 80.1 70 48.6
Os06g0151600 Oryza sativa ssp. japonica HOM05D001329 ORTHO05D004946 1.8e-13 80.1 70 48.6
CDE02G0018 Ceratophyllum demersum HOM05D001329 ORTHO05D004946 2.4e-13 79.7 70 47.1
PSO478G0947 Papaver somniferum HOM05D001329 ORTHO05D004946 2.4e-13 79.7 70 48.6
Migut.I00963 Erythranthe guttata HOM05D001329 ORTHO05D004946 3.1e-13 79.3 70 51.4
Ca_23279_v3 Cicer arietinum L. HOM05D001329 ORTHO05D004946 4.1e-13 79.0 85 44.7
Lsat_1_v5_gn_4_98041 Lactuca sativa HOM05D001329 ORTHO05D004946 4.1e-13 79.0 70 48.6
Lalb_Chr04g0263001 Lupinus albus HOM05D001329 ORTHO05D004946 4.1e-13 79.0 70 47.1
Ah.01g017270 Amaranthus hybridus HOM05D001329 ORTHO05D004946 5.3e-13 78.6 70 51.4
Ciclev10025165m.g Citrus clementina HOM05D001329 ORTHO05D004946 5.3e-13 78.6 70 48.6
PSO782G0993 Papaver somniferum HOM05D001329 ORTHO05D004946 5.3e-13 78.6 70 47.1
arahy.Tifrunner.gnm1.ann1.KL0FMA Arachis hypogaea HOM05D001329 ORTHO05D002618 6.9e-13 78.2 70 45.7
Duzib235G0146 Durio zibethinus HOM05D001329 ORTHO05D004946 6.9e-13 78.2 69 50.7
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 6.9e-13 78.2 69 50.7
MBI02_g35318_MAGBIO Magnolia biondii HOM05D001329 ORTHO05D004946 6.9e-13 78.2 70 45.7
Sed0006591 Sechium edule HOM05D001329 ORTHO05D004946 6.9e-13 78.2 70 48.6
Ah.16g103270 Amaranthus hybridus HOM05D001329 ORTHO05D004946 9.1e-13 77.8 70 51.4
Glyma.08G199700 Glycine max HOM05D001329 ORTHO05D004946 9.1e-13 77.8 70 47.1
Gohir.A10G064700 Gossypium hirsutum HOM05D001329 ORTHO05D004946 9.1e-13 77.8 69 49.3
Phvul.010G143800 Phaseolus vulgaris HOM05D001329 ORTHO05D004946 9.1e-13 77.8 70 48.6
VMungo0331G1514 Vigna mungo HOM05D001329 ORTHO05D004946 9.1e-13 77.8 70 48.6
AT5G50340 Arabidopsis thaliana HOM05D001329 ORTHO05D004946 1.2e-12 77.4 80 42.5
arahy.Tifrunner.gnm1.ann1.B6KHKZ Arachis hypogaea HOM05D001329 ORTHO05D002618 1.2e-12 77.4 70 45.7
CANSAT56G4024 Cannabis sativa HOM05D001329 ORTHO05D004946 1.2e-12 77.4 72 44.4
COL.COLO4_30535 Corchorus olitorius HOM05D001329 ORTHO05D004946 1.2e-12 77.4 69 49.3
Eucgr.J02692 Eucalyptus grandis HOM05D001329 ORTHO05D004946 1.2e-12 77.4 82 43.9
Eucgr.J02926 Eucalyptus grandis HOM05D001329 ORTHO05D004946 1.2e-12 77.4 82 43.9
Gohir.D10G066200 Gossypium hirsutum HOM05D001329 ORTHO05D004946 1.2e-12 77.4 69 49.3
Gorai.011G070300 Gossypium raimondii HOM05D001329 ORTHO05D004946 1.2e-12 77.4 69 49.3
Peaxi162Scf00038g01146 Petunia axillaris HOM05D001329 ORTHO05D004946 1.2e-12 77.4 70 50.0
Psat4g196800 Pisum sativum HOM05D001329 ORTHO05D004946 1.2e-12 77.4 70 47.1
THA.LOC104803142 Tarenaya hassleriana HOM05D001329 ORTHO05D004946 1.2e-12 77.4 72 44.4
Thecc.06G102200 Theobroma cacao HOM05D001329 ORTHO05D004946 1.2e-12 77.4 69 49.3
GSVIVG01016954001 Vitis vinifera HOM05D001329 ORTHO05D004946 1.2e-12 77.4 70 50.0
Aa31LG3G5830 Aethionema arabicum HOM05D001329 ORTHO05D004946 1.5e-12 77.0 70 47.1
BcaC01g04813 Brassica carinata HOM05D001329 ORTHO05D004946 1.5e-12 77.0 77 42.9
A03p27790 Brassica napus HOM05D001329 ORTHO05D004946 1.5e-12 77.0 77 42.9
C03p33520 Brassica napus HOM05D001329 ORTHO05D004946 1.5e-12 77.0 77 42.9
BolC3t15673H Brassica oleracea HOM05D001329 ORTHO05D004946 1.5e-12 77.0 77 42.9
BraA03t11990Z Brassica rapa HOM05D001329 ORTHO05D004946 1.5e-12 77.0 77 42.9
Carub.0008s1040 Capsella rubella HOM05D001329 ORTHO05D004946 1.5e-12 77.0 77 42.9
CiPaw.01G230000 Carya illinoinensis HOM05D001329 ORTHO05D004946 1.5e-12 77.0 85 47.1
Cc04_g02430 Coffea canephora HOM05D001329 ORTHO05D004946 1.5e-12 77.0 70 48.6
SalBow2G1072 Salvia bowleyana HOM05D001329 ORTHO05D004946 1.5e-12 77.0 86 46.5
Sp6g12440 Schrenkiella parvula HOM05D001329 ORTHO05D004946 1.5e-12 77.0 77 42.9
VMungo1080G1498 Vigna mungo HOM05D001329 ORTHO05D004946 1.5e-12 77.0 71 45.1
GSVIVG01016953001 Vitis vinifera HOM05D001329 ORTHO05D004946 1.5e-12 77.0 70 48.6
AL58U10020 Arabidopsis lyrata HOM05D001329 ORTHO05D004946 2.0e-12 76.6 77 42.9
AL8G24420 Arabidopsis lyrata HOM05D001329 ORTHO05D004946 2.0e-12 76.6 77 42.9
CANSAT56G2668 Cannabis sativa HOM05D001329 ORTHO05D004946 2.0e-12 76.6 70 45.7
Thhalv10013055m.g Eutrema salsugineum HOM05D001329 ORTHO05D004946 2.0e-12 76.6 77 42.9
QL05p019057 Quercus lobata HOM05D001329 ORTHO05D004946 2.0e-12 76.6 85 44.7
TPR.G6578 Trifolium pratense HOM05D001329 ORTHO05D004946 2.0e-12 76.6 75 44.0
CsaV3_3G023430 Cucumis sativus L. HOM05D001329 ORTHO05D004946 2.6e-12 76.3 70 45.7
Manes.11G031600 Manihot esculenta HOM05D001329 ORTHO05D004946 2.6e-12 76.3 70 47.1
Phvul.005G165000 Phaseolus vulgaris HOM05D001329 ORTHO05D004946 2.6e-12 76.3 82 43.9
Sabra01G0150400 Salix brachista HOM05D001329 ORTHO05D004946 2.6e-12 76.3 70 45.7
unitig_88.g27600 Utricularia gibba HOM05D001329 ORTHO05D004946 2.6e-12 76.3 78 46.2
Lj3g0004043 Lotus japonicus HOM05D001329 ORTHO05D004946 3.4e-12 75.9 85 42.4
Actinidia32112 Actinidia chinensis HOM05D001329 ORTHO05D004946 4.5e-12 75.5 70 45.7
Medtr8g014670 Medicago truncatula HOM05D001329 ORTHO05D004946 4.5e-12 75.5 70 44.3
Nitab4.5_0004969g0080 Nicotiana tabacum HOM05D001329 ORTHO05D004946 4.5e-12 75.5 70 48.6
TWI18G0587 Tripterygium wilfordii HOM05D001329 ORTHO05D004946 4.5e-12 75.5 70 47.1
TAR626G1508 Trochodendron aralioides HOM05D001329 ORTHO05D004946 4.5e-12 75.5 70 47.1
TAR626G1659 Trochodendron aralioides HOM05D001329 ORTHO05D004946 4.5e-12 75.5 70 47.1
arahy.Tifrunner.gnm1.ann1.V5Z0HR Arachis hypogaea HOM05D001329 ORTHO05D004946 5.9e-12 75.1 71 43.7
arahy.Tifrunner.gnm1.ann1.VU8J7C Arachis hypogaea HOM05D001329 ORTHO05D004946 5.9e-12 75.1 71 42.3
EL10Ac9g21183 Beta vulgaris HOM05D001329 ORTHO05D004946 5.9e-12 75.1 70 48.6
MD17G1180500 Malus domestica HOM05D001329 ORTHO05D004946 5.9e-12 75.1 70 47.1
Potri.001G191200 Populus trichocarpa HOM05D001329 ORTHO05D004946 5.9e-12 75.1 70 44.3
Solyc03g121120.4 Solanum lycopersicum HOM05D001329 ORTHO05D004946 5.9e-12 75.1 70 48.6
Sopen03g039950 Solanum pennellii HOM05D001329 ORTHO05D004946 5.9e-12 75.1 70 48.6
TPR.G15143 Trifolium pratense HOM05D001329 ORTHO05D004946 5.9e-12 75.1 70 45.7
Glyma.15G021000 Glycine max HOM05D001329 ORTHO05D004946 7.7e-12 74.7 71 43.7
CAN.G1143.24 Capsicum annuum HOM05D001329 ORTHO05D004946 1.0e-11 74.3 70 47.1
FvH4_6g32620 Fragaria vesca HOM05D001329 ORTHO05D004946 1.0e-11 74.3 70 47.1
PGSC0003DMG400002521 Solanum tuberosum HOM05D001329 ORTHO05D004946 1.0e-11 74.3 70 48.6
ClCG07G013420 Citrullus lanatus HOM05D001329 ORTHO05D004946 1.3e-11 73.9 70 47.1
ClCG07G013460 Citrullus lanatus HOM05D001329 ORTHO05D004946 1.3e-11 73.9 70 47.1
Medtr2g100640 Medicago truncatula HOM05D001329 ORTHO05D004946 1.7e-11 73.6 75 41.3
Nitab4.5_0005085g0040 Nicotiana tabacum HOM05D001329 ORTHO05D004946 1.7e-11 73.6 70 47.1
RcHm_v2.0_Chr2g0141101 Rosa chinensis HOM05D001329 ORTHO05D004946 2.9e-11 72.8 70 47.1
vmacro18841 Vaccinium macrocarpon HOM05D001329 ORTHO05D004946 3.8e-11 72.4 72 47.2
PGR102G1644 Punica granatum HOM05D001329 ORTHO05D004946 6.5e-11 71.6 70 45.7
MELO3C013011.2 Cucumis melo HOM05D001329 ORTHO05D004946 1.1e-10 70.9 70 45.7
Sc12g0010100 Simmondsia chinensis HOM05D001329 ORTHO05D004946 1.1e-10 70.9 70 45.7
Atru.chr1.3485 Acer truncatum HOM05D001329 ORTHO05D004946 1.4e-10 70.5 72 48.6
FAN05G0851 Fragaria x ananassa HOM05D001329 ORTHO05D004946 4.7e-09 65.5 70 45.7
FAN14G3013 Fragaria x ananassa HOM05D001329 ORTHO05D004946 4.7e-09 65.5 73 43.8
AUR62031953 Chenopodium quinoa HOM05D001329 ORTHO05D004946 1.0e-08 64.3 100 36.0
CANSAT56G3773 Cannabis sativa HOM05D001329 ORTHO05D004946 1.4e-08 63.9 63 44.4
Rhsim08G0228700 Rhododendron simsii HOM05D001329 ORTHO05D004946 1.4e-08 63.9 93 37.6
SGA_v2.0_scaffold265G46056 Striga asiatica HOM05D001329 ORTHO05D004946 1.8e-08 63.5 108 37.0
CSS0049032 Camellia sinensis var. sinensis HOM05D001329 ORTHO05D004946 5.2e-08 62.0 121 33.1
PRCOL_00001245 Prasinoderma coloniale HOM05D001329 ORTHO05D004946 1.1e-07 60.8 76 48.7
Lj9C514G19 Lonicera japonica HOM05D001329 ORTHO05D004946 1.3e-06 57.4 75 44.0
SGA_v2.0_scaffold45G16999 Striga asiatica HOM05D001329 ORTHO05D004946 1.7e-06 57.0 70 42.9
Hund07630 Selenicereus undatus HOM05D001329 ORTHO05D004946 4.8e-06 55.5 76 34.2
Cpa.g.sc2949.1 Carica papaya HOM05D001329 ORTHO05D004946 8.2e-06 54.7 45 53.3


User provided reference genes

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