Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO172G0062 Selaginella moellendorffii HOM05D006269 ORTHO05D001487 1.3e-192 676.4 379 100.0
SEGI_38563 Sequoiadendron giganteum HOM05D014410 ORTHO05D001487 5.8e-12 76.3 188 33.5
SEGI_19331 Sequoiadendron giganteum HOM05D014410 ORTHO05D001487 1.1e-10 72.0 162 34.6
SEGI_19997 Sequoiadendron giganteum HOM05D014410 ORTHO05D001487 1.4e-10 71.6 181 32.0
Medtr8g028265 Medicago truncatula HOM05D006269 ORTHO05D001487 1.9e-10 71.2 103 36.9
PGSC0003DMG400000079 Solanum tuberosum HOM05D006269 ORTHO05D001487 2.4e-10 70.9 103 37.9
Manes.01G250800 Manihot esculenta HOM05D006269 ORTHO05D001487 3.2e-10 70.5 114 32.5
SEGI_09232 Sequoiadendron giganteum HOM05D014410 ORTHO05D001487 4.2e-10 70.1 172 32.6
SEGI_05188 Sequoiadendron giganteum HOM05D006269 ORTHO05D001487 2.7e-09 67.4 114 41.2
Hund27233 Selenicereus undatus HOM05D006269 ORTHO05D001487 3.5e-09 67.0 117 33.3
Gorai.004G153900 Gossypium raimondii HOM05D006269 ORTHO05D001487 1.3e-08 65.1 131 31.3
Gohir.A08G126800 Gossypium hirsutum HOM05D006269 ORTHO05D001487 1.8e-08 64.7 131 32.1
BcaC02g12701 Brassica carinata HOM05D006269 ORTHO05D001487 2.3e-08 64.3 141 35.5
COL.COLO4_06360 Corchorus olitorius HOM05D006269 ORTHO05D001487 2.3e-08 64.3 128 32.0
Pp3c13_3400 Physcomitrium patens HOM05D006269 ORTHO05D001487 2.3e-08 64.3 234 28.2
TAR374G0506 Trochodendron aralioides HOM05D006269 ORTHO05D001487 2.3e-08 64.3 91 34.1
SalBow5G2113 Salvia bowleyana HOM05D006269 ORTHO05D001487 3.0e-08 63.9 127 32.3
AagrBONN_evm.TU.Sc2ySwM_368.336 Anthoceros agrestis HOM05D006269 ORTHO05D001487 3.9e-08 63.5 122 32.8
Nitab4.5_0013021g0030 Nicotiana tabacum HOM05D006269 ORTHO05D001487 5.1e-08 63.2 134 33.6
Phvul.010G107400 Phaseolus vulgaris HOM05D006269 ORTHO05D001487 5.1e-08 63.2 136 30.9
SEGI_19830 Sequoiadendron giganteum HOM05D014410 ORTHO05D001487 5.1e-08 63.2 177 31.6
CAN.G78.145 Capsicum annuum HOM05D006269 ORTHO05D001487 6.7e-08 62.8 127 32.3
Pp3c26_10790 Physcomitrium patens HOM05D006269 ORTHO05D001487 6.7e-08 62.8 219 27.9
Solyc01g095320.4 Solanum lycopersicum HOM05D006269 ORTHO05D001487 6.7e-08 62.8 134 34.3
Aqoxy1G02938 Aquilegia oxysepala HOM05D006269 ORTHO05D001487 8.7e-08 62.4 111 32.4
RcHm_v2.0_Chr1g0358421 Rosa chinensis HOM05D006269 ORTHO05D001487 8.7e-08 62.4 104 31.7
AL4G45510 Arabidopsis lyrata HOM05D006269 ORTHO05D001487 1.1e-07 62.0 136 30.9
Gohir.D08G148200 Gossypium hirsutum HOM05D006269 ORTHO05D001487 1.1e-07 62.0 131 30.5
Sp4g28290 Schrenkiella parvula HOM05D006269 ORTHO05D001487 1.1e-07 62.0 136 35.3
AT2G46240 Arabidopsis thaliana HOM05D006269 ORTHO05D001487 1.5e-07 61.6 147 33.3
GSVIVG01027028001 Vitis vinifera HOM05D006269 ORTHO05D001487 1.5e-07 61.6 140 27.1
Eucgr.D02334 Eucalyptus grandis HOM05D006269 ORTHO05D001487 1.9e-07 61.2 107 29.9
MD13G1123300 Malus domestica HOM05D002685 ORTHO05D001487 1.9e-07 61.2 298 26.5
SEGI_15116 Sequoiadendron giganteum HOM05D006269 ORTHO05D001487 1.9e-07 61.2 124 30.6
Psat4g157480 Pisum sativum HOM05D006269 ORTHO05D001487 2.5e-07 60.8 134 28.4
arahy.Tifrunner.gnm1.ann1.II6FYR Arachis hypogaea HOM05D006269 ORTHO05D001487 3.3e-07 60.5 160 30.0
CANSAT56G0891 Cannabis sativa HOM05D006269 ORTHO05D001487 3.3e-07 60.5 157 28.0
Duzib052G0088 Durio zibethinus HOM05D002685 ORTHO05D001487 3.3e-07 60.5 272 26.5
HPP92_008793 Vanilla planifolia HOM05D006269 ORTHO05D001487 3.3e-07 60.5 126 29.4
BraA05t19151Z Brassica rapa HOM05D006269 ORTHO05D001487 4.3e-07 60.1 145 33.1
Ciclev10018596m.g Citrus clementina HOM05D006269 ORTHO05D001487 4.3e-07 60.1 123 30.9
Mapoly0045s0108 Marchantia polymorpha HOM05D006269 ORTHO05D001487 4.3e-07 60.1 96 34.4
SEGI_14808 Sequoiadendron giganteum HOM05D014410 ORTHO05D001487 4.3e-07 60.1 176 32.4
Carub.0004s2894 Capsella rubella HOM05D006269 ORTHO05D001487 5.6e-07 59.7 121 35.5
Migut.N01576 Erythranthe guttata HOM05D006269 ORTHO05D001487 5.6e-07 59.7 141 28.4
Glyma.16G030000 Glycine max HOM05D006269 ORTHO05D001487 5.6e-07 59.7 124 30.6
HanXRQChr06g0166911 Helianthus annuus HOM05D006269 ORTHO05D001487 5.6e-07 59.7 95 38.9
Oeu008674.2 Olea europaea HOM05D006269 ORTHO05D001487 5.6e-07 59.7 114 31.6
Pp3c7_10910 Physcomitrium patens HOM05D002157 ORTHO05D002197 5.6e-07 59.7 103 35.0
Sabra02G0145300 Salix brachista HOM05D006269 ORTHO05D001487 5.6e-07 59.7 205 26.8
Solyc06g072430.3 Solanum lycopersicum HOM05D002685 ORTHO05D001487 5.6e-07 59.7 128 34.4
SGA_v2.0_scaffold11G05704 Striga asiatica HOM05D006269 ORTHO05D001487 5.6e-07 59.7 176 26.7
DCAR_008644 Daucus carota HOM05D001461 ORTHO05D001487 7.4e-07 59.3 123 32.5
Zm00001eb237960 Zea mays HOM05D006269 ORTHO05D001487 7.4e-07 59.3 95 34.7
Zm00001eb380100 Zea mays HOM05D006269 ORTHO05D001487 7.4e-07 59.3 95 34.7
Lj3g0001651 Lotus japonicus HOM05D006269 ORTHO05D001487 9.6e-07 58.9 229 28.4
TPR.G21288 Trifolium pratense HOM05D006269 ORTHO05D001487 9.6e-07 58.9 123 30.9
SEGI_27071 Sequoiadendron giganteum HOM05D006269 ORTHO05D001487 1.3e-06 58.5 103 32.0
CiPaw.05G105900 Carya illinoinensis HOM05D002685 ORTHO05D001487 1.6e-06 58.2 116 36.2
Lj1C600T10 Lonicera japonica HOM05D002685 ORTHO05D001487 1.6e-06 58.2 98 38.8
Zm00001eb364900 Zea mays HOM05D006269 ORTHO05D001487 2.1e-06 57.8 95 34.7
MELO3C021171.2 Cucumis melo HOM05D006269 ORTHO05D001487 2.8e-06 57.4 95 34.7
TWI75G0855 Tripterygium wilfordii HOM05D002685 ORTHO05D001487 2.8e-06 57.4 119 33.6
Cc02_g38780 Coffea canephora HOM05D006269 ORTHO05D001487 3.7e-06 57.0 137 32.8
Sed0002830 Sechium edule HOM05D006269 ORTHO05D001487 3.7e-06 57.0 103 31.1
FAN10G2074 Fragaria x ananassa HOM05D006269 ORTHO05D001487 4.8e-06 56.6 104 31.7
FAN10G3724 Fragaria x ananassa HOM05D006269 ORTHO05D001487 4.8e-06 56.6 104 31.7
Mapoly0035s0113 Marchantia polymorpha HOM05D006269 ORTHO05D001487 4.8e-06 56.6 176 29.5
MBI07_g36513_MAGBIO Magnolia biondii HOM05D002685 ORTHO05D001487 6.2e-06 56.2 93 39.8
PGR031G2857 Punica granatum HOM05D006269 ORTHO05D001487 6.2e-06 56.2 139 29.5
Zm00001eb403850 Zea mays HOM05D006269 ORTHO05D001487 6.2e-06 56.2 95 33.7
Cpa.g.sc96.31 Carica papaya HOM05D002685 ORTHO05D001487 8.1e-06 55.8 93 38.7
Ca_23548_v3 Cicer arietinum L. HOM05D006269 ORTHO05D001487 8.1e-06 55.8 218 23.9
Gohir.A03G150201 Gossypium hirsutum HOM05D002685 ORTHO05D001487 8.1e-06 55.8 115 33.9
HanXRQChr12g0362251 Helianthus annuus HOM05D002685 ORTHO05D001487 8.1e-06 55.8 103 41.7
Oeu058906.1 Olea europaea HOM05D002685 ORTHO05D001487 8.1e-06 55.8 93 39.8
Pp3c21_6840 Physcomitrium patens HOM05D006269 ORTHO05D001487 8.1e-06 55.8 104 33.7
QL03p051288 Quercus lobata HOM05D002685 ORTHO05D001487 8.1e-06 55.8 99 35.4
SEGI_30715 Sequoiadendron giganteum HOM05D014410 ORTHO05D001487 8.1e-06 55.8 353 26.9
SEGI_35486 Sequoiadendron giganteum HOM05D006269 ORTHO05D001487 8.1e-06 55.8 191 29.8
Thecc.01G349600 Theobroma cacao HOM05D006269 ORTHO05D001487 8.1e-06 55.8 116 32.8


User provided reference genes

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