Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO171G0075 Selaginella moellendorffii HOM05D006434 ORTHO05D008069 5.6e-118 427.6 207 100.0
Pp3c7_630 Physcomitrium patens HOM05D006434 ORTHO05D008069 2.7e-72 275.8 203 66.0
AagrBONN_evm.TU.Sc2ySwM_344.3988 Anthoceros agrestis HOM05D006434 ORTHO05D008069 1.7e-69 266.5 193 67.4
Os03g0736400 Oryza sativa ssp. japonica HOM05D006434 ORTHO05D008069 4.1e-68 261.9 202 60.4
ATR0665G567 Amborella trichopoda HOM05D006434 ORTHO05D008069 2.0e-67 259.6 201 62.2
Gohir.A07G216800 Gossypium hirsutum HOM05D006434 ORTHO05D008069 1.3e-66 256.9 200 61.5
ECA232G4812 Erigeron canadensis HOM05D006434 ORTHO05D008069 2.2e-66 256.1 201 60.2
Gohir.D07G223600 Gossypium hirsutum HOM05D006434 ORTHO05D008069 2.2e-66 256.1 199 61.8
Gorai.001G257900 Gossypium raimondii HOM05D006434 ORTHO05D008069 2.2e-66 256.1 199 61.8
HPP92_023566 Vanilla planifolia HOM05D006434 ORTHO05D008069 2.2e-66 256.1 200 63.0
Eucgr.I01896 Eucalyptus grandis HOM05D006434 ORTHO05D008069 6.5e-66 254.6 208 60.6
Sabra16G0229200 Salix brachista HOM05D006434 ORTHO05D008069 6.5e-66 254.6 201 59.7
Nn1g08819 Nelumbo nucifera HOM05D006434 ORTHO05D008069 1.1e-65 253.8 202 61.4
GSVIVG01032566001 Vitis vinifera HOM05D006434 ORTHO05D008069 1.1e-65 253.8 201 61.2
Aqoxy3G00846 Aquilegia oxysepala HOM05D006434 ORTHO05D008069 1.5e-65 253.4 210 60.0
CDE02G1577 Ceratophyllum demersum HOM05D006434 ORTHO05D008069 1.5e-65 253.4 199 61.8
MD09G1042700 Malus domestica HOM05D006434 ORTHO05D008069 1.9e-65 253.1 199 59.8
TPR.G32608 Trifolium pratense HOM05D006434 ORTHO05D008069 1.9e-65 253.1 205 59.5
Medtr6g009400 Medicago truncatula HOM05D006434 ORTHO05D008069 2.5e-65 252.7 201 60.7
Hma1.2p1_0136F.1_g062090 Hydrangea macrophylla HOM05D006434 ORTHO05D008069 4.2e-65 251.9 201 59.7
COL.COLO4_36989 Corchorus olitorius HOM05D006434 ORTHO05D008069 7.2e-65 251.1 201 60.2
Manes.15G178000 Manihot esculenta HOM05D006434 ORTHO05D008069 7.2e-65 251.1 201 60.2
Potri.001G349800 Populus trichocarpa HOM05D006434 ORTHO05D008069 7.2e-65 251.1 200 59.0
vmacro05779 Vaccinium macrocarpon HOM05D006434 ORTHO05D008069 7.2e-65 251.1 201 60.2
CAN.G1128.11 Capsicum annuum HOM05D006434 ORTHO05D008069 9.4e-65 250.8 201 59.7
HanXRQChr15g0488521 Helianthus annuus HOM05D006434 ORTHO05D008069 1.2e-64 250.4 201 58.7
RcHm_v2.0_Chr2g0169691 Rosa chinensis HOM05D006434 ORTHO05D008069 1.2e-64 250.4 199 59.3
TAR629G3263 Trochodendron aralioides HOM05D006434 ORTHO05D008069 1.2e-64 250.4 201 60.2
Duzib264G0249 Durio zibethinus HOM05D006434 ORTHO05D008069 1.6e-64 250.0 201 59.2
Nitab4.5_0001727g0150 Nicotiana tabacum HOM05D006434 ORTHO05D008069 1.6e-64 250.0 202 60.9
Psat1g076480 Pisum sativum HOM05D006434 ORTHO05D008069 1.6e-64 250.0 202 60.9
THA.LOC104823923 Tarenaya hassleriana HOM05D006434 ORTHO05D008069 1.6e-64 250.0 202 61.4
FvH4_6g49670 Fragaria vesca HOM05D006434 ORTHO05D008069 2.7e-64 249.2 199 58.8
FAN02G4063 Fragaria x ananassa HOM05D006434 ORTHO05D008069 2.7e-64 249.2 199 58.8
FAN14G5872 Fragaria x ananassa HOM05D006434 ORTHO05D008069 2.7e-64 249.2 199 58.8
Dinv35002 Davidia involucrata HOM05D006434 ORTHO05D008069 3.6e-64 248.8 201 59.2
Cfa007492 Carpinus fangiana HOM05D006434 ORTHO05D008069 4.7e-64 248.4 201 59.7
AUR62018326 Chenopodium quinoa HOM05D006434 ORTHO05D008069 6.1e-64 248.1 201 61.2
Cc07_g02850 Coffea canephora HOM05D006434 ORTHO05D008069 6.1e-64 248.1 201 59.2
Mapoly0140s0031 Marchantia polymorpha HOM05D006434 ORTHO05D008069 6.1e-64 248.1 204 60.3
PGR142G2438 Punica granatum HOM05D006434 ORTHO05D008069 6.1e-64 248.1 201 59.7
Actinidia06053 Actinidia chinensis HOM05D006434 ORTHO05D008069 8.0e-64 247.7 201 59.2
Carub.0005s0699 Capsella rubella HOM05D006434 ORTHO05D008069 8.0e-64 247.7 208 56.7
Sed0011674 Sechium edule HOM05D006434 ORTHO05D008069 8.0e-64 247.7 200 58.5
Atru.chr8.2465 Acer truncatum HOM05D006434 ORTHO05D008069 1.0e-63 247.3 202 57.9
MELO3C021484.2 Cucumis melo HOM05D006434 ORTHO05D008069 1.0e-63 247.3 200 60.0
Sc10g0004040 Simmondsia chinensis HOM05D006434 ORTHO05D008069 1.0e-63 247.3 201 59.2
CARHR292500 Cardamine hirsuta HOM05D006434 ORTHO05D008069 1.4e-63 246.9 203 58.6
Ciclev10012231m.g Citrus clementina HOM05D006434 ORTHO05D008069 1.4e-63 246.9 202 59.4
QL02p079411 Quercus lobata HOM05D006434 ORTHO05D008069 1.4e-63 246.9 201 59.7
BcaC06g33735 Brassica carinata HOM05D006434 ORTHO05D008069 1.8e-63 246.5 203 58.6
C07p37520 Brassica napus HOM05D006434 ORTHO05D008069 1.8e-63 246.5 206 57.8
BolC7t44265H Brassica oleracea HOM05D006434 ORTHO05D008069 1.8e-63 246.5 206 57.8
PSO161G0076 Papaver somniferum HOM05D006434 ORTHO05D008069 1.8e-63 246.5 200 57.5
Phvul.004G023900 Phaseolus vulgaris HOM05D006434 ORTHO05D008069 1.8e-63 246.5 205 59.0
A06p40510 Brassica napus HOM05D006434 ORTHO05D008069 2.3e-63 246.1 205 58.0
BraA06t26970Z Brassica rapa HOM05D006434 ORTHO05D008069 2.3e-63 246.1 205 58.0
CsaV3_5G037720 Cucumis sativus L. HOM05D006434 ORTHO05D008069 2.3e-63 246.1 200 60.0
Thecc.04G069300 Theobroma cacao HOM05D006434 ORTHO05D008069 2.3e-63 246.1 201 59.2
TWI56G0494 Tripterygium wilfordii HOM05D006434 ORTHO05D008069 2.3e-63 246.1 201 58.2
CSS0004781 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 3.0e-63 245.7 200 60.5
FAN05G1688 Fragaria x ananassa HOM05D006434 ORTHO05D008069 3.0e-63 245.7 199 57.8
CANSAT64G2331 Cannabis sativa HOM05D006434 ORTHO05D008069 4.0e-63 245.4 200 58.5
DCAR_006717 Daucus carota HOM05D006434 ORTHO05D008069 4.0e-63 245.4 200 58.5
Migut.H00876 Erythranthe guttata HOM05D006434 ORTHO05D008069 5.2e-63 245.0 201 59.7
Rhsim10G0029400 Rhododendron simsii HOM05D006434 ORTHO05D008069 5.2e-63 245.0 200 60.0
AL5G18090 Arabidopsis lyrata HOM05D006434 ORTHO05D008069 6.7e-63 244.6 208 55.8
Glyma.13G066900 Glycine max HOM05D006434 ORTHO05D008069 6.7e-63 244.6 201 58.7
Peaxi162Scf00059g00128 Petunia axillaris HOM05D006434 ORTHO05D008069 6.7e-63 244.6 201 58.7
Sp2g17230 Schrenkiella parvula HOM05D006434 ORTHO05D008069 6.7e-63 244.6 204 57.8
PGSC0003DMG400006900 Solanum tuberosum HOM05D006434 ORTHO05D008069 8.8e-63 244.2 201 58.2
Thhalv10004634m.g Eutrema salsugineum HOM05D006434 ORTHO05D008069 1.2e-62 243.8 204 57.4
Aa31LG2G4610 Aethionema arabicum HOM05D006434 ORTHO05D008069 2.0e-62 243.0 206 56.8
MSTRG.23964 Avicennia marina HOM05D006434 ORTHO05D008069 2.0e-62 243.0 201 58.7
Solyc02g067540.3 Solanum lycopersicum HOM05D006434 ORTHO05D008069 2.0e-62 243.0 200 58.5
Sopen02g016670 Solanum pennellii HOM05D006434 ORTHO05D008069 2.0e-62 243.0 200 58.5
Lalb_Chr21g0319131 Lupinus albus HOM05D006434 ORTHO05D008069 2.6e-62 242.7 197 59.9
VMungo0464G0451 Vigna mungo HOM05D006434 ORTHO05D008069 2.6e-62 242.7 204 58.3
CSS0040499 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 4.4e-62 241.9 212 57.5
Lj2g0012157 Lotus japonicus HOM05D006434 ORTHO05D008069 4.4e-62 241.9 201 60.2
unitig_744.g24344 Utricularia gibba HOM05D006434 ORTHO05D008069 4.4e-62 241.9 201 59.7
AUR62030560 Chenopodium quinoa HOM05D006434 ORTHO05D008069 5.7e-62 241.5 213 58.2
PSO478G2838 Papaver somniferum HOM05D006434 ORTHO05D008069 5.7e-62 241.5 200 57.0
SGA_v2.0_scaffold205G41750 Striga asiatica HOM05D006434 ORTHO05D008069 2.8e-61 239.2 200 57.5
Oeu022866.3 Olea europaea HOM05D006434 ORTHO05D008069 8.2e-61 237.7 192 58.9
arahy.Tifrunner.gnm1.ann1.ICRE53 Arachis hypogaea HOM05D006434 ORTHO05D008069 4.1e-60 235.3 200 58.0
arahy.Tifrunner.gnm1.ann1.X2C98S Arachis hypogaea HOM05D006434 ORTHO05D008069 4.1e-60 235.3 200 58.0
Lsat_1_v5_gn_4_180280 Lactuca sativa HOM05D006434 ORTHO05D008069 4.1e-60 235.3 214 55.1
Zm00001eb215320 Zea mays HOM05D006434 ORTHO05D008069 1.7e-58 229.9 206 56.3
FAN09G0258 Fragaria x ananassa HOM05D006434 ORTHO05D008069 7.2e-57 224.6 192 55.7
Glyma.19G017500 Glycine max HOM05D006434 ORTHO05D008069 1.2e-56 223.8 192 57.3
CiPaw.03G032300 Carya illinoinensis HOM05D006434 ORTHO05D008069 3.6e-56 222.2 185 58.4
EL10Ac2g02902 Beta vulgaris HOM05D006434 ORTHO05D008069 1.8e-55 219.9 239 50.6
CBR_g31858 Chara braunii HOM05D006434 ORTHO05D008069 5.2e-55 218.4 203 55.7
CSS0001127 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 2.0e-54 216.5 212 53.8
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 1.3e-53 213.8 184 57.1
CSS0033350 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.4e-52 210.3 204 54.9
Haze_14607 Corylus avellana HOM05D006434 ORTHO05D008069 3.1e-52 209.1 185 56.2
Cre13.g566300 Chlamydomonas reinhardtii HOM05D006434 ORTHO05D008069 1.2e-51 207.2 206 50.5
Prupe.3G275100 Prunus persica HOM05D006434 ORTHO05D008069 2.0e-51 206.5 164 59.8
Cpa.g.sc14.62 Carica papaya HOM05D006434 ORTHO05D008069 3.5e-51 205.7 176 56.8
Ca_04243_v3 Cicer arietinum L. HOM05D006434 ORTHO05D008069 7.7e-51 204.5 216 48.6
AT3G28460 Arabidopsis thaliana HOM05D006434 ORTHO05D008069 1.3e-50 203.8 175 55.4
Nitab4.5_0003431g0070 Nicotiana tabacum HOM05D006434 ORTHO05D008069 1.7e-50 203.4 179 57.5
SalBow1G5247 Salvia bowleyana HOM05D006434 ORTHO05D008069 1.5e-49 200.3 166 59.6
PRCOL_00006620 Prasinoderma coloniale HOM05D006434 ORTHO05D008069 7.5e-46 188.0 206 44.7
CSS0043817 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.0e-42 177.6 157 56.7
MBI01_g13068_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 2.3e-39 166.4 119 63.9
Lj7A404T37 Lonicera japonica HOM05D006434 ORTHO05D008069 4.0e-39 165.6 120 64.2
SEGI_25544 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 7.0e-36 154.8 121 61.2
Hund13291 Selenicereus undatus HOM05D006434 ORTHO05D008069 2.7e-35 152.9 117 59.8
SEGI_38692 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 3.3e-33 146.0 117 60.7
MCO03G139 Micromonas commoda HOM05D006434 ORTHO05D008069 9.5e-25 117.9 120 45.0
Sopen01g021310 Solanum pennellii HOM05D006434 ORTHO05D008069 1.6e-19 100.5 87 56.3
MBI01_g13070_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 4.6e-19 99.0 71 66.2
Solyc01g057060.1 Solanum lycopersicum HOM05D006434 ORTHO05D008069 3.0e-18 96.3 89 51.7
MD17G1044100 Malus domestica HOM05D006434 ORTHO05D008069 3.1e-15 86.3 58 70.7
TAR371G0222 Trochodendron aralioides HOM05D006434 ORTHO05D008069 6.4e-13 78.6 68 57.4


User provided reference genes

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