Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO170G0055 Selaginella moellendorffii HOM05D058183 ORTHO05D008932 5.5e-237 823.9 426 100.0
SMO141G0094 Selaginella moellendorffii HOM05D058183 ORTHO05D008932 2.4e-184 649.0 407 88.0
Mapoly0013s0010 Marchantia polymorpha HOM05D007223 ORTHO05D008932 2.0e-13 81.3 79 53.2
FAN12G3200 Fragaria x ananassa HOM05D007223 ORTHO05D008932 3.8e-12 77.0 111 46.8
FvH4_4g08200 Fragaria vesca HOM05D007223 ORTHO05D008932 6.5e-12 76.3 111 46.8
THA.LOC104813522 Tarenaya hassleriana HOM05D007223 ORTHO05D008932 1.9e-11 74.7 106 43.4
SEGI_39293 Sequoiadendron giganteum HOM05D007223 ORTHO05D008932 2.5e-11 74.3 75 54.7
Ciclev10010470m.g Citrus clementina HOM05D007223 ORTHO05D008932 3.2e-11 73.9 72 56.9
Lsat_1_v5_gn_5_85421 Lactuca sativa HOM05D007223 ORTHO05D008932 5.5e-11 73.2 74 56.8
Duzib170G0975 Durio zibethinus HOM05D007223 ORTHO05D008932 7.2e-11 72.8 109 47.7
GSVIVG01029215001 Vitis vinifera HOM05D007223 ORTHO05D008932 1.2e-10 72.0 74 54.1
FAN17G0481 Fragaria x ananassa HOM05D007223 ORTHO05D008932 1.6e-10 71.6 110 45.5
MD13G1253600 Malus domestica HOM05D007223 ORTHO05D008932 1.6e-10 71.6 72 55.6
Oeu042168.1 Olea europaea HOM05D007223 ORTHO05D008932 1.6e-10 71.6 72 52.8
TAR625G0650 Trochodendron aralioides HOM05D007223 ORTHO05D008932 1.6e-10 71.6 72 58.3
Os04g0653300 Oryza sativa ssp. japonica HOM05D007223 ORTHO05D008932 2.1e-10 71.2 84 50.0
FAN22G1200 Fragaria x ananassa HOM05D007223 ORTHO05D008932 2.7e-10 70.9 110 43.6
HanXRQChr10g0308641 Helianthus annuus HOM05D007223 ORTHO05D008932 2.7e-10 70.9 72 54.2
FAN07G1685 Fragaria x ananassa HOM05D007223 ORTHO05D008932 3.6e-10 70.5 110 44.5
RcHm_v2.0_Chr4g0402441 Rosa chinensis HOM05D007223 ORTHO05D008932 3.6e-10 70.5 110 43.6
Atru.chr7.623 Acer truncatum HOM05D007223 ORTHO05D008932 4.7e-10 70.1 75 53.3
PSO782G5105 Papaver somniferum HOM05D007223 ORTHO05D008932 4.7e-10 70.1 85 50.6
CANSAT11G1503 Cannabis sativa HOM05D007223 ORTHO05D008932 6.1e-10 69.7 72 55.6
Thhalv10015874m.g Eutrema salsugineum HOM05D007223 ORTHO05D008932 1.0e-09 68.9 103 45.6
Psat4g012360 Pisum sativum HOM05D007223 ORTHO05D008932 1.0e-09 68.9 72 54.2
Potri.018G092300 Populus trichocarpa HOM05D007223 ORTHO05D008932 1.0e-09 68.9 81 51.9
SEGI_19995 Sequoiadendron giganteum HOM05D007223 ORTHO05D008932 1.0e-09 68.9 76 51.3
TAR383G1061 Trochodendron aralioides HOM05D007223 ORTHO05D008932 1.0e-09 68.9 105 43.8
COL.COLO4_37700 Corchorus olitorius HOM05D007223 ORTHO05D008932 1.4e-09 68.6 73 52.1
MELO3C004026.2 Cucumis melo HOM05D007223 ORTHO05D008932 1.4e-09 68.6 72 48.6
ECA234G1236 Erigeron canadensis HOM05D007223 ORTHO05D008932 1.4e-09 68.6 72 55.6
Gohir.A08G084300 Gossypium hirsutum HOM05D007223 ORTHO05D008932 1.4e-09 68.6 74 54.1
Gohir.D08G093900 Gossypium hirsutum HOM05D007223 ORTHO05D008932 1.4e-09 68.6 74 54.1
Sp6g19140 Schrenkiella parvula HOM05D007223 ORTHO05D008932 1.4e-09 68.6 103 44.7
Nn8g40486 Nelumbo nucifera HOM05D007223 ORTHO05D008932 1.8e-09 68.2 72 54.2
CiPaw.08G036200 Carya illinoinensis HOM05D007223 ORTHO05D008932 2.3e-09 67.8 113 46.0
Dinv42721 Davidia involucrata HOM05D007223 ORTHO05D008932 2.3e-09 67.8 72 50.0
Dinv43380 Davidia involucrata HOM05D007223 ORTHO05D008932 2.3e-09 67.8 72 50.0
Gorai.004G099600 Gossypium raimondii HOM05D007223 ORTHO05D008932 2.3e-09 67.8 74 54.1
TPR.G5371 Trifolium pratense HOM05D007223 ORTHO05D008932 2.3e-09 67.8 72 55.6
BcaC04g19969 Brassica carinata HOM05D007223 ORTHO05D008932 3.0e-09 67.4 75 50.7
A02p08480 Brassica napus HOM05D007223 ORTHO05D008932 3.0e-09 67.4 72 54.2
A10p14870 Brassica napus HOM05D007223 ORTHO05D008932 3.0e-09 67.4 75 50.7
C09p49290 Brassica napus HOM05D007223 ORTHO05D008932 3.0e-09 67.4 75 50.7
BolC9t57780H Brassica oleracea HOM05D007223 ORTHO05D008932 3.0e-09 67.4 75 50.7
BraA02t05920Z Brassica rapa HOM05D007223 ORTHO05D008932 3.0e-09 67.4 72 54.2
BraA10t43566Z Brassica rapa HOM05D007223 ORTHO05D008932 3.0e-09 67.4 75 50.7
Oeu004200.1 Olea europaea HOM05D007223 ORTHO05D008932 3.0e-09 67.4 72 52.8
Sabra06G0129600 Salix brachista HOM05D007223 ORTHO05D008932 3.0e-09 67.4 79 50.6
DCAR_014699 Daucus carota HOM05D007223 ORTHO05D008932 4.0e-09 67.0 75 53.3
Potri.006G166900 Populus trichocarpa HOM05D007223 ORTHO05D008932 4.0e-09 67.0 81 50.6
Thecc.09G177700 Theobroma cacao HOM05D007223 ORTHO05D008932 4.0e-09 67.0 72 52.8
Aa31LG3G13310 Aethionema arabicum HOM05D007223 ORTHO05D008932 5.2e-09 66.6 72 55.6
BcaB08g36098 Brassica carinata HOM05D007223 ORTHO05D008932 5.2e-09 66.6 72 51.4
BcaC03g14153 Brassica carinata HOM05D007223 ORTHO05D008932 5.2e-09 66.6 75 52.0
C02p14240 Brassica napus HOM05D007223 ORTHO05D008932 5.2e-09 66.6 75 52.0
BolC2t07548H Brassica oleracea HOM05D007223 ORTHO05D008932 5.2e-09 66.6 75 52.0
CSS0040203 Camellia sinensis var. sinensis HOM05D007223 ORTHO05D008932 5.2e-09 66.6 113 42.5
Hma1.2p1_1025F.1_g249310 Hydrangea macrophylla HOM05D007223 ORTHO05D008932 5.2e-09 66.6 73 52.1
Phvul.003G145600 Phaseolus vulgaris HOM05D007223 ORTHO05D008932 5.2e-09 66.6 75 53.3
Prupe.1G085900 Prunus persica HOM05D007223 ORTHO05D008932 5.2e-09 66.6 72 52.8
AT5G57420 Arabidopsis thaliana HOM05D007223 ORTHO05D008932 6.8e-09 66.2 72 54.2
ClCG11G012160 Citrullus lanatus HOM05D007223 ORTHO05D008932 6.8e-09 66.2 74 48.6
Cc06_g13230 Coffea canephora HOM05D007223 ORTHO05D008932 6.8e-09 66.2 72 52.8
Medtr4g128070 Medicago truncatula HOM05D007223 ORTHO05D008932 6.8e-09 66.2 72 54.2
QL02p097776 Quercus lobata HOM05D007223 ORTHO05D008932 6.8e-09 66.2 76 51.3
AagrBONN_evm.TU.Sc2ySwM_117.1187 Anthoceros agrestis HOM05D007223 ORTHO05D008932 8.8e-09 65.9 85 47.1
Lj4g0003272 Lotus japonicus HOM05D007223 ORTHO05D008932 8.8e-09 65.9 75 52.0
MBI16_g39833_MAGBIO Magnolia biondii HOM05D007223 ORTHO05D008932 8.8e-09 65.9 78 48.7
PGR102G0813 Punica granatum HOM05D007223 ORTHO05D008932 8.8e-09 65.9 79 51.9
Sed0023808 Sechium edule HOM05D007223 ORTHO05D008932 8.8e-09 65.9 74 47.3
AL8G33400 Arabidopsis lyrata HOM05D007223 ORTHO05D008932 1.2e-08 65.5 72 54.2
MSTRG.19707 Avicennia marina HOM05D007223 ORTHO05D008932 1.2e-08 65.5 76 50.0
Haze_22095 Corylus avellana HOM05D007223 ORTHO05D008932 1.2e-08 65.5 94 46.8
Eucgr.C02329 Eucalyptus grandis HOM05D007223 ORTHO05D008932 1.2e-08 65.5 72 50.0
Rhsim01G0004500 Rhododendron simsii HOM05D007223 ORTHO05D008932 1.2e-08 65.5 82 47.6
THA.LOC104817792 Tarenaya hassleriana HOM05D007223 ORTHO05D008932 1.2e-08 65.5 72 51.4
ATR0580G272 Amborella trichopoda HOM05D007223 ORTHO05D008932 1.5e-08 65.1 74 52.7
BcaB05g22346 Brassica carinata HOM05D007223 ORTHO05D008932 1.5e-08 65.1 75 50.7
Carub.0008s1794 Capsella rubella HOM05D007223 ORTHO05D008932 1.5e-08 65.1 72 52.8
Ca_21226_v3 Cicer arietinum L. HOM05D007223 ORTHO05D008932 1.5e-08 65.1 74 52.7
Manes.14G153900 Manihot esculenta HOM05D007223 ORTHO05D008932 1.5e-08 65.1 73 54.8
SalBow6G4081 Salvia bowleyana HOM05D007223 ORTHO05D008932 2.0e-08 64.7 72 51.4
arahy.Tifrunner.gnm1.ann1.LBMC6N Arachis hypogaea HOM05D007223 ORTHO05D008932 2.6e-08 64.3 88 46.6
Cfa013503 Carpinus fangiana HOM05D007223 ORTHO05D008932 2.6e-08 64.3 71 50.7
Dinv41246 Davidia involucrata HOM05D007223 ORTHO05D008932 2.6e-08 64.3 72 51.4
Duzib168G2276 Durio zibethinus HOM05D007223 ORTHO05D008932 2.6e-08 64.3 72 51.4
Lalb_Chr07g0180471 Lupinus albus HOM05D007223 ORTHO05D008932 2.6e-08 64.3 75 52.0
Cpa.g.sc233.11 Carica papaya HOM05D007223 ORTHO05D008932 3.4e-08 63.9 75 50.7
CsaV3_2G008380 Cucumis sativus L. HOM05D007223 ORTHO05D008932 4.4e-08 63.5 73 47.9
Lalb_Chr13g0300221 Lupinus albus HOM05D007223 ORTHO05D008932 4.4e-08 63.5 72 51.4
MBI14_g17369_MAGBIO Magnolia biondii HOM05D003252 ORTHO05D003640 5.7e-08 63.2 73 50.7
CARHR271220 Cardamine hirsuta HOM05D007223 ORTHO05D008932 7.5e-08 62.8 72 51.4
vmacro13125 Vaccinium macrocarpon HOM05D007223 ORTHO05D008932 9.8e-08 62.4 80 47.5
arahy.Tifrunner.gnm1.ann1.1E3WXN Arachis hypogaea HOM05D007223 ORTHO05D008932 1.3e-07 62.0 94 43.6
Lj5C7T1 Lonicera japonica HOM05D007223 ORTHO05D008932 1.3e-07 62.0 81 46.9
Lj5C590T0 Lonicera japonica HOM05D007223 ORTHO05D008932 1.7e-07 61.6 81 46.9
SGA_v2.0_scaffold69G23253 Striga asiatica HOM05D007223 ORTHO05D008932 1.7e-07 61.6 99 41.4
VMungo1215G0104 Vigna mungo HOM05D007223 ORTHO05D008932 1.7e-07 61.6 75 49.3
Actinidia04146 Actinidia chinensis HOM05D007223 ORTHO05D008932 2.2e-07 61.2 72 50.0
MSTRG.6217 Avicennia marina HOM05D007223 ORTHO05D008932 2.2e-07 61.2 78 47.4
EL10Ac8g18282 Beta vulgaris HOM05D007223 ORTHO05D008932 3.7e-07 60.5 79 46.8
Peaxi162Scf00231g00621 Petunia axillaris HOM05D007223 ORTHO05D008932 3.7e-07 60.5 76 46.1
HPP92_017414 Vanilla planifolia HOM05D007223 ORTHO05D008932 4.9e-07 60.1 75 45.3
AUR62033216 Chenopodium quinoa HOM05D007223 ORTHO05D008932 6.3e-07 59.7 97 43.3
Migut.J01482 Erythranthe guttata HOM05D007223 ORTHO05D008932 1.8e-06 58.2 78 43.6
CBR_g39692 Chara braunii HOM05D000117 ORTHO05D000070 2.4e-06 57.8 82 40.2


User provided reference genes

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