Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO170G0019 Selaginella moellendorffii HOM05D034812 ORTHO05D037546 1.9e-214 748.8 359 100.0
SMO137G0326 Selaginella moellendorffii HOM05D034812 ORTHO05D037546 4.2e-105 385.6 403 55.1
SMO170G0080 Selaginella moellendorffii HOM05D034812 ORTHO05D037546 2.8e-48 196.8 144 72.9
Potri.007G042500 Populus trichocarpa HOM05D000838 ORTHO05D000656 5.2e-10 69.7 113 35.4
Sabra07G0037700 Salix brachista HOM05D000838 ORTHO05D000656 6.7e-10 69.3 113 35.4
Ah.01g006690 Amaranthus hybridus HOM05D000838 ORTHO05D000656 3.3e-09 67.0 102 30.4
Thecc.01G054300 Theobroma cacao HOM05D000838 ORTHO05D000656 7.4e-09 65.9 96 35.4
Thecc.02G099000 Theobroma cacao HOM05D000838 ORTHO05D000656 1.7e-08 64.7 112 35.7
Duzib147G1356 Durio zibethinus HOM05D000838 ORTHO05D000656 2.2e-08 64.3 96 34.4
Gohir.D02G210600 Gossypium hirsutum HOM05D000838 ORTHO05D000656 2.2e-08 64.3 112 33.0
Gorai.005G238600 Gossypium raimondii HOM05D000838 ORTHO05D000656 2.2e-08 64.3 112 33.0
Lj4C144G10 Lonicera japonica HOM05D000838 ORTHO05D000656 2.2e-08 64.3 95 37.9
AUR62011442 Chenopodium quinoa HOM05D000838 ORTHO05D000656 2.8e-08 63.9 113 31.9
Potri.005G137600 Populus trichocarpa HOM05D000838 ORTHO05D000656 3.7e-08 63.5 104 32.7
Dinv39863 Davidia involucrata HOM05D000838 ORTHO05D000656 4.8e-08 63.2 92 35.9
Gohir.A11G191300 Gossypium hirsutum HOM05D000838 ORTHO05D000656 4.8e-08 63.2 96 34.4
Eucgr.G01455 Eucalyptus grandis HOM05D000838 ORTHO05D000656 8.2e-08 62.4 96 34.4
Gohir.D11G198100 Gossypium hirsutum HOM05D000838 ORTHO05D000656 8.2e-08 62.4 96 34.4
Gorai.007G212100 Gossypium raimondii HOM05D000838 ORTHO05D000656 8.2e-08 62.4 96 34.4
MD02G1170800 Malus domestica HOM05D000838 ORTHO05D000656 8.2e-08 62.4 113 32.7
Sc11g0004210 Simmondsia chinensis HOM05D000838 ORTHO05D000656 1.1e-07 62.0 113 31.0
AUR62016620 Chenopodium quinoa HOM05D000838 ORTHO05D000656 1.4e-07 61.6 96 32.3
Cc07_g05930 Coffea canephora HOM05D000838 ORTHO05D000656 1.4e-07 61.6 115 30.4
Oeu013701.3 Olea europaea HOM05D000838 ORTHO05D000656 1.4e-07 61.6 95 30.5
PSO339G4864 Papaver somniferum HOM05D000838 ORTHO05D000656 1.4e-07 61.6 113 33.6
SEGI_37905 Sequoiadendron giganteum HOM05D000823 ORTHO05D000088 1.4e-07 61.6 161 28.6
Eucgr.H01651 Eucalyptus grandis HOM05D000838 ORTHO05D000656 1.8e-07 61.2 96 34.4
Eucgr.H02009 Eucalyptus grandis HOM05D000838 ORTHO05D000656 1.8e-07 61.2 96 34.4
FvH4_2g34591 Fragaria vesca HOM05D000838 ORTHO05D000656 1.8e-07 61.2 112 33.0
RcHm_v2.0_Chr6g0256811 Rosa chinensis HOM05D000838 ORTHO05D000656 1.8e-07 61.2 96 30.2
Cc08_g09050 Coffea canephora HOM05D000838 ORTHO05D000656 2.4e-07 60.8 112 28.6
Dinv29978 Davidia involucrata HOM05D000838 ORTHO05D000656 2.4e-07 60.8 118 33.1
Duzib052G0760 Durio zibethinus HOM05D000838 ORTHO05D000656 2.4e-07 60.8 112 32.1
Manes.13G127300 Manihot esculenta HOM05D000838 ORTHO05D000656 2.4e-07 60.8 114 32.5
Actinidia36499 Actinidia chinensis HOM05D000838 ORTHO05D000656 3.1e-07 60.5 92 32.6
CiPaw.06G143100 Carya illinoinensis HOM05D000838 ORTHO05D000656 3.1e-07 60.5 127 26.8
Duzib132G0647 Durio zibethinus HOM05D000838 ORTHO05D000656 3.1e-07 60.5 100 34.0
Lsat_1_v5_gn_4_166060 Lactuca sativa HOM05D000838 ORTHO05D000656 3.1e-07 60.5 91 33.0
VMungo1309G0097 Vigna mungo HOM05D000838 ORTHO05D000656 3.1e-07 60.5 160 30.6
Ciclev10025376m.g Citrus clementina HOM05D000838 ORTHO05D000656 4.1e-07 60.1 141 29.8
Gohir.A03G189966 Gossypium hirsutum HOM05D000838 ORTHO05D000656 4.1e-07 60.1 112 32.1
Prupe.1G438000 Prunus persica HOM05D000838 ORTHO05D000656 4.1e-07 60.1 97 33.0
CSS0027638 Camellia sinensis var. sinensis HOM05D000838 ORTHO05D000656 5.3e-07 59.7 120 30.0
Oeu043553.1 Olea europaea HOM05D000838 ORTHO05D000656 5.3e-07 59.7 96 32.3
RcHm_v2.0_Chr6g0299531 Rosa chinensis HOM05D000838 ORTHO05D000656 5.3e-07 59.7 96 32.3
SGA_v2.0_scaffold90G27669 Striga asiatica HOM05D000838 ORTHO05D000656 5.3e-07 59.7 114 32.5
Migut.C00592 Erythranthe guttata HOM05D000838 ORTHO05D000656 7.0e-07 59.3 96 31.2
Nitab4.5_0001034g0090 Nicotiana tabacum HOM05D000838 ORTHO05D000656 7.0e-07 59.3 92 31.5
Dinv42143 Davidia involucrata HOM05D001625 ORTHO05D002663 9.1e-07 58.9 95 34.7
Duzib264G1128 Durio zibethinus HOM05D000838 ORTHO05D000656 9.1e-07 58.9 96 34.4
Gohir.D13G038100 Gossypium hirsutum HOM05D000838 ORTHO05D000656 9.1e-07 58.9 96 31.2
Gorai.013G042700 Gossypium raimondii HOM05D000838 ORTHO05D000656 9.1e-07 58.9 96 31.2
QL06p041780 Quercus lobata HOM05D000838 ORTHO05D000656 9.1e-07 58.9 96 33.3
Aqoxy1G04089 Aquilegia oxysepala HOM05D000838 ORTHO05D000656 1.2e-06 58.5 122 30.3
Cpa.g.sc62.25 Carica papaya HOM05D000838 ORTHO05D000656 1.2e-06 58.5 100 32.0
Duzib116G0471 Durio zibethinus HOM05D000838 ORTHO05D000656 1.2e-06 58.5 97 34.0
FAN27G2722 Fragaria x ananassa HOM05D000838 ORTHO05D000656 1.2e-06 58.5 97 33.0
Lalb_Chr08g0245601 Lupinus albus HOM05D000838 ORTHO05D000656 1.2e-06 58.5 97 33.0
Oeu009750.1 Olea europaea HOM05D000838 ORTHO05D000656 1.2e-06 58.5 140 30.0
Potri.009G103200 Populus trichocarpa HOM05D000838 ORTHO05D000656 1.2e-06 58.5 96 31.2
Prupe.7G134800 Prunus persica HOM05D000838 ORTHO05D000656 1.2e-06 58.5 96 33.3
PGR102G2156 Punica granatum HOM05D000838 ORTHO05D000656 1.2e-06 58.5 97 34.0
Rhsim07G0229600 Rhododendron simsii HOM05D000838 ORTHO05D000656 1.2e-06 58.5 96 32.3
MSTRG.1338 Avicennia marina HOM05D000838 ORTHO05D000656 1.6e-06 58.2 96 31.2
FAN15G1741 Fragaria x ananassa HOM05D000838 ORTHO05D000656 1.6e-06 58.2 96 29.2
QL01p023780 Quercus lobata HOM05D000838 ORTHO05D000656 1.6e-06 58.2 129 27.9
RcHm_v2.0_Chr6g0256821 Rosa chinensis HOM05D000838 ORTHO05D000656 1.6e-06 58.2 100 27.0
FAN15G3161 Fragaria x ananassa HOM05D000838 ORTHO05D000656 2.0e-06 57.8 127 26.0
FAN28G1460 Fragaria x ananassa HOM05D000838 ORTHO05D000656 2.0e-06 57.8 151 29.1
HanXRQChr15g0490441 Helianthus annuus HOM05D000838 ORTHO05D000656 2.0e-06 57.8 97 29.9
Lsat_1_v5_gn_4_166080 Lactuca sativa HOM05D000838 ORTHO05D000656 2.0e-06 57.8 97 29.9
QL11p036107 Quercus lobata HOM05D000838 ORTHO05D000656 2.0e-06 57.8 144 28.5
TWI79G0856 Tripterygium wilfordii HOM05D000838 ORTHO05D000656 2.0e-06 57.8 179 26.3
Cfa004008 Carpinus fangiana HOM05D000838 ORTHO05D000656 2.6e-06 57.4 150 26.7
CiPaw.01G019200 Carya illinoinensis HOM05D000838 ORTHO05D000656 2.6e-06 57.4 96 32.3
Cc10_g04280 Coffea canephora HOM05D000838 ORTHO05D000656 2.6e-06 57.4 96 32.3
FAN20G1141 Fragaria x ananassa HOM05D000838 ORTHO05D000656 2.6e-06 57.4 114 30.7
Manes.12G155800 Manihot esculenta HOM05D000838 ORTHO05D000656 2.6e-06 57.4 106 31.1
RcHm_v2.0_Chr2g0105291 Rosa chinensis HOM05D000838 ORTHO05D000656 2.6e-06 57.4 96 33.3
Hund06179 Selenicereus undatus HOM05D000838 ORTHO05D000656 2.6e-06 57.4 96 32.3
SGA_v2.0_scaffold15G07285 Striga asiatica HOM05D000838 ORTHO05D000656 2.6e-06 57.4 92 31.5
Atru.chr3.346 Acer truncatum HOM05D000838 ORTHO05D000656 3.5e-06 57.0 96 32.3
Actinidia17862 Actinidia chinensis HOM05D000838 ORTHO05D000656 3.5e-06 57.0 106 29.2
CiPaw.05G052000 Carya illinoinensis HOM05D000838 ORTHO05D000656 3.5e-06 57.0 127 28.3
Ciclev10029072m.g Citrus clementina HOM05D000838 ORTHO05D000656 3.5e-06 57.0 144 27.8
CsaV3_2G028000 Cucumis sativus L. HOM05D000838 ORTHO05D000656 3.5e-06 57.0 97 32.0
Nitab4.5_0000310g0050 Nicotiana tabacum HOM05D000838 ORTHO05D000656 3.5e-06 57.0 115 29.6
PSO339G3471 Papaver somniferum HOM05D000838 ORTHO05D000656 3.5e-06 57.0 122 29.5
QL11p036115 Quercus lobata HOM05D000838 ORTHO05D000656 3.5e-06 57.0 94 27.7
GSVIVG01022143001 Vitis vinifera HOM05D000838 ORTHO05D000656 3.5e-06 57.0 143 30.1
MD15G1282300 Malus domestica HOM05D000838 ORTHO05D000656 4.5e-06 56.6 96 32.3
PGR142G0798 Punica granatum HOM05D000838 ORTHO05D000656 4.5e-06 56.6 129 27.1
PGR142G3670 Punica granatum HOM05D000838 ORTHO05D000656 4.5e-06 56.6 129 27.1
Zm00001eb413890 Zea mays HOM05D000838 ORTHO05D000656 4.5e-06 56.6 114 29.8
CANSAT01G0264 Cannabis sativa HOM05D000838 ORTHO05D000656 5.9e-06 56.2 105 32.4
CiPaw.05G052100 Carya illinoinensis HOM05D000838 ORTHO05D000656 5.9e-06 56.2 114 28.1
MELO3C018443.2 Cucumis melo HOM05D000838 ORTHO05D000656 5.9e-06 56.2 130 27.7
Duzib132G0610 Durio zibethinus HOM05D000838 ORTHO05D000656 5.9e-06 56.2 107 29.0
Migut.H01031 Erythranthe guttata HOM05D000838 ORTHO05D000656 5.9e-06 56.2 98 27.6
FvH4_2g06300 Fragaria vesca HOM05D000838 ORTHO05D000656 5.9e-06 56.2 105 24.8
HanXRQChr07g0191571 Helianthus annuus HOM05D000838 ORTHO05D000656 5.9e-06 56.2 97 28.9
HanXRQChr15g0490451 Helianthus annuus HOM05D000838 ORTHO05D000656 5.9e-06 56.2 104 31.7
Potri.009G103400 Populus trichocarpa HOM05D000838 ORTHO05D000656 5.9e-06 56.2 182 26.9
RcHm_v2.0_Chr6g0307571 Rosa chinensis HOM05D000838 ORTHO05D000656 5.9e-06 56.2 179 27.4
RcHm_v2.0_Chr6g0307721 Rosa chinensis HOM05D000838 ORTHO05D000656 5.9e-06 56.2 179 27.4
SalBow1G3810 Salvia bowleyana HOM05D000838 ORTHO05D000656 5.9e-06 56.2 106 31.1
Atru.chr13.654 Acer truncatum HOM05D000838 ORTHO05D000656 7.7e-06 55.8 114 30.7
MSTRG.16750 Avicennia marina HOM05D000838 ORTHO05D000656 7.7e-06 55.8 152 28.3
CAN.G1041.25 Capsicum annuum HOM05D000838 ORTHO05D000656 7.7e-06 55.8 96 30.2
Dinv28752 Davidia involucrata HOM05D000838 ORTHO05D000656 7.7e-06 55.8 96 29.2
FvH4_1g15900 Fragaria vesca HOM05D000838 ORTHO05D000656 7.7e-06 55.8 96 33.3
FAN19G2049 Fragaria x ananassa HOM05D000838 ORTHO05D000656 7.7e-06 55.8 96 33.3
Lsat_1_v5_gn_1_20940 Lactuca sativa HOM05D000838 ORTHO05D000656 7.7e-06 55.8 97 28.9
Peaxi162Scf00016g01953 Petunia axillaris HOM05D000838 ORTHO05D000656 7.7e-06 55.8 92 34.8
Psat5g077240 Pisum sativum HOM05D000838 ORTHO05D000656 7.7e-06 55.8 113 29.2
SMO265G0014 Selaginella moellendorffii HOM05D000838 ORTHO05D000656 7.7e-06 55.8 115 30.4
GSVIVG01031761001 Vitis vinifera HOM05D000838 ORTHO05D000656 7.7e-06 55.8 96 31.2


User provided reference genes

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