Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 9.3e-184 646.7 326 100.0
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 6.8e-110 401.4 316 63.9
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 2.0e-109 399.8 327 60.9
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 1.8e-107 393.3 323 62.2
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 1.2e-106 390.6 317 61.8
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 1.6e-106 390.2 330 59.7
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 1.6e-106 390.2 323 61.0
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 1.6e-106 390.2 317 60.6
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 2.0e-106 389.8 323 61.0
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 6.0e-106 388.3 319 61.4
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 7.8e-106 387.9 330 59.1
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 1.3e-105 387.1 320 59.1
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 8.6e-105 384.4 317 59.9
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 8.6e-105 384.4 320 58.8
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 1.1e-104 384.0 326 60.1
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 1.5e-104 383.6 317 60.3
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 1.9e-104 383.3 326 59.5
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 4.3e-104 382.1 317 60.9
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 4.3e-104 382.1 315 60.3
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 5.6e-104 381.7 317 60.6
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 9.5e-104 380.9 318 59.4
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 1.2e-103 380.6 317 60.3
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 1.6e-103 380.2 326 59.5
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 2.1e-103 379.8 317 59.6
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 2.1e-103 379.8 323 60.1
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 3.6e-103 379.0 319 59.9
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 8.0e-103 377.9 317 59.6
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 1.1e-102 377.5 318 58.8
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.1e-102 377.5 325 59.1
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 1.1e-102 377.5 312 60.9
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 1.1e-102 377.5 325 59.4
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.4e-102 377.1 323 59.1
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 1.8e-102 376.7 329 59.0
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 1.8e-102 376.7 318 60.1
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 2.3e-102 376.3 313 58.8
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 4.0e-102 375.6 323 59.1
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 8.9e-102 374.4 317 60.3
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 8.9e-102 374.4 317 58.7
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 1.5e-101 373.6 318 58.5
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 2.0e-101 373.2 323 59.1
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 2.0e-101 373.2 326 59.2
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 2.6e-101 372.9 318 58.5
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 3.4e-101 372.5 318 58.5
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 4.4e-101 372.1 318 58.2
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 5.8e-101 371.7 326 58.6
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 7.5e-101 371.3 317 59.3
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 7.5e-101 371.3 317 58.0
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 9.8e-101 370.9 307 60.3
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 1.7e-100 370.2 317 59.3
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 1.7e-100 370.2 327 59.0
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 2.2e-100 369.8 321 57.9
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 2.2e-100 369.8 318 58.5
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 2.2e-100 369.8 319 59.2
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 2.9e-100 369.4 325 56.3
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 4.9e-100 368.6 328 57.3
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 4.9e-100 368.6 326 58.3
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 6.4e-100 368.2 314 58.3
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 6.4e-100 368.2 331 57.1
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 8.3e-100 367.9 321 59.8
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 8.3e-100 367.9 326 58.0
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 1.1e-99 367.5 344 57.0
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 1.4e-99 367.1 344 57.0
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 1.4e-99 367.1 325 57.2
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 4.1e-99 365.5 319 57.4
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 5.4e-99 365.2 312 57.7
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 7.0e-99 364.8 316 57.9
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 9.2e-99 364.4 346 55.2
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 1.6e-98 363.6 359 53.2
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.3e-97 360.5 358 53.1
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 3.0e-97 359.4 296 60.8
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 6.6e-97 358.2 296 60.8
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 2.5e-96 356.3 298 60.4
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 3.3e-96 355.9 316 58.9
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 7.3e-96 354.8 319 58.3
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 7.3e-96 354.8 335 56.4
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 2.1e-95 353.2 325 55.7
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 2.1e-95 353.2 297 60.3
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 2.8e-95 352.8 326 56.7
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 1.1e-94 350.9 315 57.5
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 2.3e-94 349.7 330 57.0
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 7.5e-93 344.7 316 56.6
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 4.9e-92 342.0 292 57.9
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 6.4e-92 341.7 324 55.9
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 7.8e-90 334.7 318 54.7
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 5.1e-89 332.0 292 57.2
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 5.1e-89 332.0 351 50.7
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 7.3e-88 328.2 346 51.2
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 7.3e-88 328.2 346 51.2
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 2.1e-87 326.6 280 59.6
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 2.8e-87 326.2 344 51.2
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 1.8e-86 323.6 277 59.9
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 1.3e-84 317.4 279 57.7
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 1.3e-84 317.4 359 49.3
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 1.7e-84 317.0 321 53.9
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 4.9e-84 315.5 292 56.5
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 1.9e-83 313.5 265 58.9
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 5.4e-83 312.0 301 52.2
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 7.1e-83 311.6 284 57.4
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 7.8e-82 308.1 260 59.2
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 1.0e-81 307.8 318 51.6
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 1.7e-81 307.0 274 57.3
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 2.3e-81 306.6 327 49.2
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 2.5e-80 303.1 301 52.5
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 5.6e-80 302.0 377 47.5
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 2.1e-79 300.1 314 51.6
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 2.0e-77 293.5 275 56.4
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 1.7e-76 290.4 320 51.2
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 1.1e-72 277.7 299 49.5
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 3.3e-72 276.2 237 59.9
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 5.3e-70 268.9 229 59.4
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 2.7e-66 256.5 283 51.2
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 1.8e-65 253.8 357 42.6
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 3.7e-63 246.1 268 51.1
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 1.1e-62 244.6 223 56.5
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 1.9e-56 223.8 223 51.6
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 4.8e-55 219.2 251 46.6
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 1.6e-50 204.1 316 38.6
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 6.0e-50 202.2 233 48.1
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 1.1e-38 164.9 270 39.3
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 6.9e-38 162.2 131 64.1
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 5.7e-32 142.5 179 46.4
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 1.3e-28 131.3 129 52.7
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 7.2e-27 125.6 132 49.2
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 9.4e-27 125.2 113 51.3
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 2.0e-16 90.9 88 48.9
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 2.5e-11 73.9 67 56.7
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 3.2e-11 73.6 88 45.5
Phvul.008G046701 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 8.8e-09 65.5 70 54.3
MD02G1212000 Malus domestica HOM05D006055 ORTHO05D007480 1.2e-08 65.1 39 74.4


User provided reference genes

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