Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO169G0082 Selaginella moellendorffii HOM05D005219 ORTHO05D006451 4.4e-138 494.6 245 100.0
AagrBONN_evm.TU.Sc2ySwM_344.1599 Anthoceros agrestis HOM05D005219 ORTHO05D006451 2.6e-61 239.6 235 51.1
Mapoly0096s0060 Marchantia polymorpha HOM05D005219 ORTHO05D006451 2.3e-54 216.5 221 48.4
Pp3c1_29080 Physcomitrium patens HOM05D005219 ORTHO05D006451 2.0e-53 213.4 244 45.1
Pp3c1_29082 Physcomitrium patens HOM05D005219 ORTHO05D006451 2.0e-53 213.4 244 45.1
Nn1g08341 Nelumbo nucifera HOM05D005219 ORTHO05D006451 7.5e-53 211.5 222 46.8
HanXRQChr02g0043081 Helianthus annuus HOM05D005219 ORTHO05D006451 8.3e-52 208.0 235 46.4
Sc09g0004330 Simmondsia chinensis HOM05D005219 ORTHO05D006451 1.1e-51 207.6 225 48.0
Pp3c2_17910 Physcomitrium patens HOM05D005219 ORTHO05D006451 3.1e-51 206.1 224 49.1
CSS0003875 Camellia sinensis var. sinensis HOM05D005219 ORTHO05D006451 5.4e-51 205.3 222 48.2
CSS0004797 Camellia sinensis var. sinensis HOM05D005219 ORTHO05D006451 5.4e-51 205.3 222 48.2
Dinv16800 Davidia involucrata HOM05D005219 ORTHO05D006451 1.2e-50 204.1 222 49.1
Atru.chr4.1140 Acer truncatum HOM05D005219 ORTHO05D006451 1.6e-50 203.8 222 46.4
EL10Ac4g08973 Beta vulgaris HOM05D005219 ORTHO05D006451 7.8e-50 201.4 226 44.7
Actinidia19951 Actinidia chinensis HOM05D005219 ORTHO05D006451 1.0e-49 201.1 223 48.4
Ciclev10025072m.g Citrus clementina HOM05D005219 ORTHO05D006451 1.3e-49 200.7 222 46.8
Lsat_1_v5_gn_5_69540 Lactuca sativa HOM05D005219 ORTHO05D006451 3.8e-49 199.1 235 46.4
TPR.G12784 Trifolium pratense HOM05D005219 ORTHO05D006451 3.8e-49 199.1 222 47.3
ECA233G5772 Erigeron canadensis HOM05D005219 ORTHO05D006451 6.6e-49 198.4 236 44.9
AUR62036029 Chenopodium quinoa HOM05D005219 ORTHO05D006451 1.1e-48 197.6 224 44.2
AUR62004810 Chenopodium quinoa HOM05D005219 ORTHO05D006451 3.3e-48 196.1 224 43.8
Lj4C816G5 Lonicera japonica HOM05D005219 ORTHO05D006451 5.6e-48 195.3 224 46.4
Actinidia36586 Actinidia chinensis HOM05D005219 ORTHO05D004865 1.2e-47 194.1 223 47.1
TAR381G1173 Trochodendron aralioides HOM05D005219 ORTHO05D006451 1.2e-47 194.1 222 45.0
Cfa002238 Carpinus fangiana HOM05D005219 ORTHO05D006451 2.1e-47 193.4 225 44.9
GSVIVG01022419001 Vitis vinifera HOM05D005219 ORTHO05D006451 2.1e-47 193.4 222 45.9
Hund22177 Selenicereus undatus HOM05D005219 ORTHO05D006451 2.8e-47 193.0 224 46.0
SEGI_19215 Sequoiadendron giganteum HOM05D005219 ORTHO05D006451 2.8e-47 193.0 225 45.3
CDE06G1179 Ceratophyllum demersum HOM05D005219 ORTHO05D006451 3.6e-47 192.6 225 43.6
Ca_17595_v3 Cicer arietinum L. HOM05D005219 ORTHO05D006451 3.6e-47 192.6 222 44.6
SMO144G0202 Selaginella moellendorffii HOM05D005219 ORTHO05D006451 4.7e-47 192.2 226 45.6
CiPaw.04G179100 Carya illinoinensis HOM05D005219 ORTHO05D006451 6.1e-47 191.8 222 45.0
Potri.019G008541 Populus trichocarpa HOM05D005219 ORTHO05D006451 6.1e-47 191.8 225 45.3
Oeu037875.1 Olea europaea HOM05D005219 ORTHO05D006451 8.0e-47 191.4 224 45.5
Ah.06g191770 Amaranthus hybridus HOM05D005219 ORTHO05D006451 1.0e-46 191.0 224 42.9
Medtr8g095210 Medicago truncatula HOM05D005219 ORTHO05D006451 1.8e-46 190.3 222 45.9
CiPaw.03G253500 Carya illinoinensis HOM05D005219 ORTHO05D006451 3.0e-46 189.5 222 45.0
Rhsim10G0123800 Rhododendron simsii HOM05D005219 ORTHO05D006451 3.0e-46 189.5 222 45.0
CANSAT54G2070 Cannabis sativa HOM05D005219 ORTHO05D006451 4.0e-46 189.1 224 43.3
CDE08G1591 Ceratophyllum demersum HOM05D005219 ORTHO05D006451 5.2e-46 188.7 225 43.1
DCAR_009584 Daucus carota HOM05D005219 ORTHO05D006451 8.9e-46 188.0 222 44.6
Oeu011013.3 Olea europaea HOM05D005219 ORTHO05D006451 1.2e-45 187.6 224 45.1
Aqoxy6G00109 Aquilegia oxysepala HOM05D005219 ORTHO05D006451 2.0e-45 186.8 225 43.6
Solyc05g056530.4 Solanum lycopersicum HOM05D005219 ORTHO05D006451 2.0e-45 186.8 231 45.0
TWI75G0018 Tripterygium wilfordii HOM05D005219 ORTHO05D006451 2.0e-45 186.8 222 44.1
Potri.004G138900 Populus trichocarpa HOM05D005219 ORTHO05D006451 2.6e-45 186.4 229 44.5
PGR142G2743 Punica granatum HOM05D005219 ORTHO05D006451 2.6e-45 186.4 222 43.2
Sopen05g034930 Solanum pennellii HOM05D005219 ORTHO05D006451 2.6e-45 186.4 224 46.0
PSO170G0098 Papaver somniferum HOM05D005219 ORTHO05D006451 3.4e-45 186.0 222 44.1
PSO782G1219 Papaver somniferum HOM05D005219 ORTHO05D006451 3.4e-45 186.0 222 43.7
CAN.G1156.53 Capsicum annuum HOM05D005219 ORTHO05D006451 4.4e-45 185.7 224 46.9
Phvul.002G277800 Phaseolus vulgaris HOM05D005219 ORTHO05D006451 5.7e-45 185.3 222 44.6
Glyma.05G197300 Glycine max HOM05D005219 ORTHO05D006451 7.5e-45 184.9 222 44.1
Cpa.g.sc37.82 Carica papaya HOM05D005219 ORTHO05D006451 9.8e-45 184.5 222 42.3
Prupe.4G281500 Prunus persica HOM05D005219 ORTHO05D006451 9.8e-45 184.5 221 43.0
PGSC0003DMG400023442 Solanum tuberosum HOM05D005219 ORTHO05D006451 9.8e-45 184.5 224 46.0
FAN26G1898 Fragaria x ananassa HOM05D005219 ORTHO05D006451 1.7e-44 183.7 224 42.4
DCAR_019997 Daucus carota HOM05D005219 ORTHO05D006451 2.2e-44 183.3 222 41.9
FAN23G1877 Fragaria x ananassa HOM05D005219 ORTHO05D006451 2.2e-44 183.3 224 42.4
arahy.Tifrunner.gnm1.ann1.9Z2GEU Arachis hypogaea HOM05D005219 ORTHO05D006451 2.9e-44 183.0 222 44.1
Glyma.06G159700 Glycine max HOM05D005219 ORTHO05D006451 2.9e-44 183.0 222 41.0
Phvul.009G157400 Phaseolus vulgaris HOM05D005219 ORTHO05D006451 2.9e-44 183.0 222 41.9
Sabra19G0006900 Salix brachista HOM05D005219 ORTHO05D006451 2.9e-44 183.0 227 44.1
FvH4_1g25450 Fragaria vesca HOM05D005219 ORTHO05D006451 3.7e-44 182.6 224 42.0
arahy.Tifrunner.gnm1.ann1.4364K7 Arachis hypogaea HOM05D005219 ORTHO05D006451 4.9e-44 182.2 222 44.1
Lalb_Chr13g0296831 Lupinus albus HOM05D005219 ORTHO05D006451 4.9e-44 182.2 222 43.7
HPP92_011421 Vanilla planifolia HOM05D005219 ORTHO05D006451 6.4e-44 181.8 222 41.4
FAN28G0381 Fragaria x ananassa HOM05D005219 ORTHO05D006451 8.3e-44 181.4 224 42.0
Lj4g0026114 Lotus japonicus HOM05D005219 ORTHO05D006451 8.3e-44 181.4 225 43.1
Hund06895 Selenicereus undatus HOM05D005219 ORTHO05D006451 1.1e-43 181.0 234 42.3
Nitab4.5_0002704g0040 Nicotiana tabacum HOM05D005219 ORTHO05D006451 1.4e-43 180.6 224 44.2
Gohir.A05G376400 Gossypium hirsutum HOM05D005219 ORTHO05D006451 2.4e-43 179.9 222 43.7
Peaxi162Scf00525g00059 Petunia axillaris HOM05D005219 ORTHO05D006451 2.4e-43 179.9 224 43.8
ClCG02G000120 Citrullus lanatus HOM05D005219 ORTHO05D006451 4.1e-43 179.1 222 43.7
FAN19G1780 Fragaria x ananassa HOM05D005219 ORTHO05D006451 4.1e-43 179.1 224 41.5
Gohir.D04G039600 Gossypium hirsutum HOM05D005219 ORTHO05D006451 4.1e-43 179.1 222 43.2
Gorai.012G044600 Gossypium raimondii HOM05D005219 ORTHO05D006451 4.1e-43 179.1 222 43.2
Thecc.01G233500 Theobroma cacao HOM05D005219 ORTHO05D006451 4.1e-43 179.1 222 41.9
RcHm_v2.0_Chr2g0123471 Rosa chinensis HOM05D005219 ORTHO05D006451 5.4e-43 178.7 224 42.0
Nitab4.5_0000496g0030 Nicotiana tabacum HOM05D005219 ORTHO05D006451 7.0e-43 178.3 224 43.3
Duzib147G1025 Durio zibethinus HOM05D005219 ORTHO05D006451 1.6e-42 177.2 222 42.3
Cc00_g05550 Coffea canephora HOM05D005219 ORTHO05D006451 2.7e-42 176.4 224 43.8
CsaV3_2G019800 Cucumis sativus L. HOM05D005219 ORTHO05D006451 4.6e-42 175.6 222 42.3
BcaB08g37236 Brassica carinata HOM05D005219 ORTHO05D006451 1.0e-41 174.5 223 43.5
Sed0017542 Sechium edule HOM05D005219 ORTHO05D006451 1.0e-41 174.5 225 42.7
QL10p038974 Quercus lobata HOM05D005219 ORTHO05D006451 1.3e-41 174.1 237 39.7
A10p28110 Brassica napus HOM05D005219 ORTHO05D006451 1.7e-41 173.7 225 42.2
BolC9t59579H Brassica oleracea HOM05D005219 ORTHO05D006451 2.3e-41 173.3 225 43.1
Os02g0556900 Oryza sativa ssp. japonica HOM05D005219 ORTHO05D006451 2.3e-41 173.3 222 40.1
Glyma.08G004700 Glycine max HOM05D005219 ORTHO05D006451 3.0e-41 172.9 222 41.4
VMungo1309G1202 Vigna mungo HOM05D005219 ORTHO05D006451 3.0e-41 172.9 236 38.6
MSTRG.23501 Avicennia marina HOM05D005219 ORTHO05D006451 3.9e-41 172.6 224 41.1
SGA_v2.0_scaffold211G42145 Striga asiatica HOM05D005219 ORTHO05D006451 5.0e-41 172.2 224 39.7
Lalb_Chr12g0202821 Lupinus albus HOM05D005219 ORTHO05D006451 6.6e-41 171.8 221 43.0
C09p68310 Brassica napus HOM05D005219 ORTHO05D006451 8.6e-41 171.4 225 42.7
Sp6g34240 Schrenkiella parvula HOM05D005219 ORTHO05D006451 8.6e-41 171.4 222 41.9
BraA10t44860Z Brassica rapa HOM05D005219 ORTHO05D006451 1.5e-40 170.6 225 42.2
unitig_899.g14489 Utricularia gibba HOM05D005219 ORTHO05D006451 5.6e-40 168.7 224 41.1
BraA03t09746Z Brassica rapa HOM05D005219 ORTHO05D006451 7.3e-40 168.3 223 42.2
MD15G1138200 Malus domestica HOM05D005219 ORTHO05D006451 7.3e-40 168.3 221 41.6
SGA_v2.0_scaffold54G19585 Striga asiatica HOM05D005219 ORTHO05D006451 1.2e-39 167.5 224 39.3
A03p04030 Brassica napus HOM05D005219 ORTHO05D006451 2.1e-39 166.8 223 41.7
BcaB01g05651 Brassica carinata HOM05D005219 ORTHO05D006451 4.7e-39 165.6 223 41.3
Eucgr.I00008 Eucalyptus grandis HOM05D005219 ORTHO05D006451 4.7e-39 165.6 224 40.2
Zm00001eb182070 Zea mays HOM05D005219 ORTHO05D006451 6.2e-39 165.2 220 40.5
AT5G08630 Arabidopsis thaliana HOM05D005219 ORTHO05D006451 8.0e-39 164.9 222 39.6
AL6G19360 Arabidopsis lyrata HOM05D005219 ORTHO05D006451 1.1e-38 164.5 222 40.1
SHI11418 Sapria himalayana HOM05D005219 ORTHO05D006451 2.3e-38 163.3 222 39.2
C03p04490 Brassica napus HOM05D005219 ORTHO05D006451 5.2e-38 162.2 223 41.3
Thhalv10012814m.g Eutrema salsugineum HOM05D005219 ORTHO05D006451 5.2e-38 162.2 222 40.1
Migut.H00795 Erythranthe guttata HOM05D005219 ORTHO05D006451 2.0e-37 160.2 222 40.5
Carub.0006s0762 Capsella rubella HOM05D005219 ORTHO05D006451 3.4e-37 159.5 222 38.7
CARHR204350 Cardamine hirsuta HOM05D005219 ORTHO05D006451 1.7e-36 157.1 222 40.1
THA.LOC104818408 Tarenaya hassleriana HOM05D005219 ORTHO05D006451 1.9e-35 153.7 222 38.7
ATR1136G012 Amborella trichopoda HOM05D005219 ORTHO05D006451 4.1e-35 152.5 183 43.2
ATR0737G007 Amborella trichopoda HOM05D005219 ORTHO05D006451 2.0e-34 150.2 184 44.0
Aa31LG3G17910 Aethionema arabicum HOM05D005219 ORTHO05D006451 4.6e-34 149.1 264 34.1
vmacro12733 Vaccinium macrocarpon HOM05D005219 ORTHO05D006451 5.0e-33 145.6 303 31.7
Haze_25418 Corylus avellana HOM05D005219 ORTHO05D006451 8.3e-28 128.3 98 61.2
Os04g0439400 Oryza sativa ssp. japonica HOM05D005219 ORTHO05D006451 1.7e-25 120.6 95 55.8
MBI07_g10939_MAGBIO Magnolia biondii HOM05D005219 ORTHO05D006451 3.9e-25 119.4 234 35.0
Psat7g208160 Pisum sativum HOM05D005219 ORTHO05D006451 1.9e-19 100.5 185 34.1
Hma1.2p1_0057F.1_g032080 Hydrangea macrophylla HOM05D005219 ORTHO05D006451 4.0e-14 82.8 125 35.2
Manes.13G076600 Manihot esculenta HOM05D005219 ORTHO05D006451 1.9e-11 73.9 136 32.4
Sabra04G0089200 Salix brachista HOM05D005219 ORTHO05D006451 1.6e-10 70.9 91 39.6
Haze_25419 Corylus avellana HOM05D005219 ORTHO05D006451 2.1e-10 70.5 128 32.0
MELO3C023202.2 Cucumis melo HOM05D005219 ORTHO05D006451 4.6e-10 69.3 125 33.6
Glyma.07G026800 Glycine max HOM05D005219 ORTHO05D021551 6.6e-09 65.5 75 36.0
CBR_g15970 Chara braunii HOM05D005219 ORTHO05D006451 2.5e-08 63.5 152 28.3
Psat7g041880 Pisum sativum HOM05D005219 ORTHO05D006451 3.3e-08 63.2 141 30.5


User provided reference genes

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