Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO169G0010 Selaginella moellendorffii HOM05D004280 ORTHO05D005059 2.4e-90 335.5 169 100.0
Pp3c14_18710 Physcomitrium patens HOM05D004280 ORTHO05D005059 1.8e-50 203.0 148 66.2
ATR0681G021 Amborella trichopoda HOM05D004280 ORTHO05D005059 2.0e-49 199.5 150 63.3
Pp3c1_41986 Physcomitrium patens HOM05D004280 ORTHO05D005059 3.5e-49 198.7 146 66.4
Mapoly0011s0044 Marchantia polymorpha HOM05D004280 ORTHO05D005059 2.2e-48 196.1 150 66.7
Nn7g35895 Nelumbo nucifera HOM05D004280 ORTHO05D005059 2.9e-48 195.7 149 62.4
Gorai.004G017100 Gossypium raimondii HOM05D004280 ORTHO05D005059 1.5e-47 193.4 151 61.6
MELO3C021620.2 Cucumis melo HOM05D004280 ORTHO05D005059 1.9e-47 193.0 149 62.4
Sed0023881 Sechium edule HOM05D004280 ORTHO05D005059 2.5e-47 192.6 168 59.5
CsaV3_5G026740 Cucumis sativus L. HOM05D004280 ORTHO05D005059 3.2e-47 192.2 149 61.7
Aqoxy7G03617 Aquilegia oxysepala HOM05D004280 ORTHO05D005059 5.5e-47 191.4 152 61.2
CSS0019544 Camellia sinensis var. sinensis HOM05D004280 ORTHO05D005059 5.5e-47 191.4 149 63.1
TAR623G1159 Trochodendron aralioides HOM05D004280 ORTHO05D005059 5.5e-47 191.4 160 61.2
MBI05_g32463_MAGBIO Magnolia biondii HOM05D004280 ORTHO05D005059 7.2e-47 191.0 157 61.1
FAN25G1542 Fragaria x ananassa HOM05D004280 ORTHO05D005059 9.4e-47 190.7 150 63.3
Lj2A726G7 Lonicera japonica HOM05D004280 ORTHO05D005059 9.4e-47 190.7 150 62.0
Duzib170G0536 Durio zibethinus HOM05D004280 ORTHO05D005059 1.6e-46 189.9 148 61.5
Gohir.D08G021800 Gossypium hirsutum HOM05D004280 ORTHO05D005059 1.6e-46 189.9 148 61.5
FvH4_3g45340 Fragaria vesca HOM05D004280 ORTHO05D005059 2.1e-46 189.5 149 63.1
Gohir.A08G011300 Gossypium hirsutum HOM05D004280 ORTHO05D005059 3.6e-46 188.7 148 60.8
ClCG09G019650 Citrullus lanatus HOM05D004280 ORTHO05D005059 4.7e-46 188.3 165 57.6
SEGI_26181 Sequoiadendron giganteum HOM05D004280 ORTHO05D005059 4.7e-46 188.3 149 61.1
FAN11G0747 Fragaria x ananassa HOM05D004280 ORTHO05D005059 6.1e-46 188.0 150 62.7
CAN.G193.6 Capsicum annuum HOM05D004280 ORTHO05D005059 1.0e-45 187.2 150 60.7
Manes.01G036600 Manihot esculenta HOM05D004280 ORTHO05D005059 1.0e-45 187.2 149 61.1
CSS0019811 Camellia sinensis var. sinensis HOM05D004280 ORTHO05D005059 1.4e-45 186.8 146 63.0
Duzib150G0115 Durio zibethinus HOM05D004280 ORTHO05D005059 1.4e-45 186.8 149 60.4
Dinv23876 Davidia involucrata HOM05D004280 ORTHO05D005059 1.8e-45 186.4 152 59.9
SMO146G0138 Selaginella moellendorffii HOM05D004280 ORTHO05D005059 1.8e-45 186.4 151 63.6
unitig_749.g13584 Utricularia gibba HOM05D004280 ORTHO05D005059 2.3e-45 186.0 151 61.6
vmacro00623 Vaccinium macrocarpon HOM05D004280 ORTHO05D005059 2.3e-45 186.0 158 60.1
HPP92_017297 Vanilla planifolia HOM05D004280 ORTHO05D005059 2.3e-45 186.0 159 57.9
Prupe.6G007100 Prunus persica HOM05D004280 ORTHO05D005059 4.0e-45 185.3 149 61.1
GSVIVG01025433001 Vitis vinifera HOM05D004280 ORTHO05D005059 4.0e-45 185.3 146 61.0
FAN16G1471 Fragaria x ananassa HOM05D004280 ORTHO05D005059 5.2e-45 184.9 160 60.0
Peaxi162Scf01112g00112 Petunia axillaris HOM05D004280 ORTHO05D005059 6.8e-45 184.5 150 59.3
AagrBONN_evm.TU.Sc2ySwM_344.2640 Anthoceros agrestis HOM05D004280 ORTHO05D005059 1.2e-44 183.7 149 63.1
FAN21G3004 Fragaria x ananassa HOM05D004280 ORTHO05D005059 1.2e-44 183.7 140 65.0
PGR102G2828 Punica granatum HOM05D004280 ORTHO05D005059 1.2e-44 183.7 148 60.8
Thecc.09G208500 Theobroma cacao HOM05D004280 ORTHO05D005059 1.2e-44 183.7 148 59.5
Hma1.2p1_0843F.1_g227335 Hydrangea macrophylla HOM05D004280 ORTHO05D005059 1.5e-44 183.3 148 61.5
Hma1.2p1_0843F.1_g227340 Hydrangea macrophylla HOM05D004280 ORTHO05D005059 1.5e-44 183.3 148 61.5
Lsat_1_v5_gn_1_67700 Lactuca sativa HOM05D004280 ORTHO05D005059 2.6e-44 182.6 148 61.5
MD03G1005700 Malus domestica HOM05D004280 ORTHO05D005059 2.6e-44 182.6 150 61.3
MD11G1008600 Malus domestica HOM05D004280 ORTHO05D005059 2.6e-44 182.6 150 60.7
DCAR_009024 Daucus carota HOM05D004280 ORTHO05D005059 4.4e-44 181.8 152 61.8
Glyma.06G309800 Glycine max HOM05D004280 ORTHO05D005059 5.7e-44 181.4 150 60.0
Glyma.14G130400 Glycine max HOM05D004280 ORTHO05D005059 5.7e-44 181.4 150 60.0
RcHm_v2.0_Chr4g0431981 Rosa chinensis HOM05D004280 ORTHO05D005059 5.7e-44 181.4 144 63.9
RcHm_v2.0_Chr5g0083141 Rosa chinensis HOM05D004280 ORTHO05D005059 5.7e-44 181.4 144 63.9
Sabra03G0163100 Salix brachista HOM05D004280 ORTHO05D005059 5.7e-44 181.4 156 57.7
SalBow6G7108 Salvia bowleyana HOM05D004280 ORTHO05D005059 5.7e-44 181.4 149 60.4
Rhsim09G0027500 Rhododendron simsii HOM05D004280 ORTHO05D005059 9.8e-44 180.6 150 60.7
RhsimUnG0194900 Rhododendron simsii HOM05D004280 ORTHO05D005059 9.8e-44 180.6 150 60.7
MSTRG.18872 Avicennia marina HOM05D004280 ORTHO05D005059 1.7e-43 179.9 149 59.1
Ciclev10016632m.g Citrus clementina HOM05D004280 ORTHO05D005059 1.7e-43 179.9 148 58.8
COL.COLO4_35029 Corchorus olitorius HOM05D004280 ORTHO05D005059 2.2e-43 179.5 150 60.7
ECA248G0362 Erigeron canadensis HOM05D004280 ORTHO05D005059 2.2e-43 179.5 148 59.5
Thhalv10011786m.g Eutrema salsugineum HOM05D004280 ORTHO05D005059 2.2e-43 179.5 148 58.1
Glyma.14G154000 Glycine max HOM05D004280 ORTHO05D005059 2.2e-43 179.5 150 59.3
Migut.D02547 Erythranthe guttata HOM05D004280 ORTHO05D005059 2.8e-43 179.1 149 59.1
Potri.001G006300 Populus trichocarpa HOM05D004280 ORTHO05D005059 2.8e-43 179.1 148 57.4
Sabra01G0004700 Salix brachista HOM05D004280 ORTHO05D005059 2.8e-43 179.1 150 57.3
TWI60G1521 Tripterygium wilfordii HOM05D004280 ORTHO05D005059 2.8e-43 179.1 148 59.5
Carub.0001s4380 Capsella rubella HOM05D004280 ORTHO05D005059 3.7e-43 178.7 148 58.1
Manes.04G095700 Manihot esculenta HOM05D004280 ORTHO05D005059 3.7e-43 178.7 149 58.4
Sc10g0001010 Simmondsia chinensis HOM05D004280 ORTHO05D005059 4.8e-43 178.3 144 61.8
PGSC0003DMG401025662 Solanum tuberosum HOM05D004280 ORTHO05D005059 4.8e-43 178.3 154 57.1
C06p15910 Brassica napus HOM05D004280 ORTHO05D005059 6.3e-43 177.9 143 59.4
QL01p008475 Quercus lobata HOM05D004280 ORTHO05D005059 6.3e-43 177.9 152 59.2
Cpa.g.sc119.63 Carica papaya HOM05D004280 ORTHO05D005059 8.3e-43 177.6 143 59.4
Rhsim02G0077200 Rhododendron simsii HOM05D004280 ORTHO05D005059 8.3e-43 177.6 157 55.4
BcaB02g10831 Brassica carinata HOM05D004280 ORTHO05D005059 1.1e-42 177.2 143 59.4
CANSAT01G2556 Cannabis sativa HOM05D004280 ORTHO05D005059 1.4e-42 176.8 154 57.8
CARHR044950 Cardamine hirsuta HOM05D004280 ORTHO05D005059 1.4e-42 176.8 148 57.4
Cc01_g00630 Coffea canephora HOM05D004280 ORTHO05D005059 1.4e-42 176.8 157 56.7
THA.LOC104822674 Tarenaya hassleriana HOM05D004280 ORTHO05D005059 1.4e-42 176.8 148 56.8
BcaC08g44186 Brassica carinata HOM05D004280 ORTHO05D005059 2.4e-42 176.0 143 59.4
SalBow4G3146 Salvia bowleyana HOM05D004280 ORTHO05D005059 2.4e-42 176.0 182 52.7
BolC6t36783H Brassica oleracea HOM05D004280 ORTHO05D005059 3.1e-42 175.6 166 54.2
Haze_22956 Corylus avellana HOM05D004280 ORTHO05D005059 3.1e-42 175.6 152 59.2
Medtr3g083880 Medicago truncatula HOM05D004280 ORTHO05D005059 3.1e-42 175.6 151 58.3
Os05g0347000 Oryza sativa ssp. japonica HOM05D004280 ORTHO05D005059 3.1e-42 175.6 146 61.0
Phvul.001G056600 Phaseolus vulgaris HOM05D004280 ORTHO05D005059 3.1e-42 175.6 149 58.4
CiPaw.16G086400 Carya illinoinensis HOM05D004280 ORTHO05D005059 4.1e-42 175.3 150 61.3
Cc05_g01230 Coffea canephora HOM05D004280 ORTHO05D005059 4.1e-42 175.3 157 57.3
Atru.chr1.3614 Acer truncatum HOM05D004280 ORTHO05D005059 5.4e-42 174.9 148 58.8
CiPaw.13G175600 Carya illinoinensis HOM05D004280 ORTHO05D005059 5.4e-42 174.9 150 60.7
CBR_g22380 Chara braunii HOM05D004280 ORTHO05D005059 5.4e-42 174.9 149 60.4
Haze_22962 Corylus avellana HOM05D004280 ORTHO05D005059 5.4e-42 174.9 152 59.2
Solyc04g076580.4 Solanum lycopersicum HOM05D004280 ORTHO05D005059 5.4e-42 174.9 149 57.7
AT1G55300 Arabidopsis thaliana HOM05D004280 ORTHO05D005059 7.0e-42 174.5 147 58.5
arahy.Tifrunner.gnm1.ann1.0AF3IJ Arachis hypogaea HOM05D004280 ORTHO05D005059 7.0e-42 174.5 160 56.2
SEGI_04342 Sequoiadendron giganteum HOM05D004280 ORTHO05D005059 9.1e-42 174.1 149 58.4
SGA_v2.0_scaffold13G06338 Striga asiatica HOM05D004280 ORTHO05D005059 1.2e-41 173.7 150 60.0
BraA05t20650Z Brassica rapa HOM05D004280 ORTHO05D005059 1.6e-41 173.3 143 58.0
Eucgr.B03612 Eucalyptus grandis HOM05D004280 ORTHO05D005059 1.6e-41 173.3 150 59.3
Potri.003G218700 Populus trichocarpa HOM05D004280 ORTHO05D005059 1.6e-41 173.3 148 56.8
TPR.G24159 Trifolium pratense HOM05D004280 ORTHO05D005059 1.6e-41 173.3 151 58.3
BolC6t36098H Brassica oleracea HOM05D004280 ORTHO05D005059 2.0e-41 172.9 158 54.4
Sp1g40960 Schrenkiella parvula HOM05D004280 ORTHO05D005059 2.0e-41 172.9 148 56.1
C06p10250 Brassica napus HOM05D004280 ORTHO05D005059 2.7e-41 172.6 143 58.7
Glyma.11G173655 Glycine max HOM05D004280 ORTHO05D005059 3.5e-41 172.2 151 58.3
Lj6g0003060 Lotus japonicus HOM05D004280 ORTHO05D005059 3.5e-41 172.2 151 57.0
A06p00280 Brassica napus HOM05D004280 ORTHO05D005059 4.5e-41 171.8 143 58.0
BraA06t23245Z Brassica rapa HOM05D004280 ORTHO05D005059 4.5e-41 171.8 143 58.0
PSO210G5203 Papaver somniferum HOM05D004280 ORTHO05D005059 4.5e-41 171.8 152 57.9
PSO761G0405 Papaver somniferum HOM05D004280 ORTHO05D005059 4.5e-41 171.8 152 57.9
Hund03769 Selenicereus undatus HOM05D004280 ORTHO05D005059 4.5e-41 171.8 169 53.8
Aa31LG10G1060 Aethionema arabicum HOM05D004280 ORTHO05D005059 7.7e-41 171.0 148 56.8
A05p17570 Brassica napus HOM05D004280 ORTHO05D005059 1.3e-40 170.2 143 58.0
VMungo0647G2277 Vigna mungo HOM05D004280 ORTHO05D005059 3.8e-40 168.7 145 58.6
Ca_16394_v3 Cicer arietinum L. HOM05D004280 ORTHO05D005059 1.1e-39 167.2 150 55.3
Zm00001eb233380 Zea mays HOM05D004280 ORTHO05D005059 1.5e-39 166.8 144 57.6
ECA233G4188 Erigeron canadensis HOM05D004280 ORTHO05D005059 1.9e-39 166.4 149 53.7
Lsat_1_v5_gn_6_54260 Lactuca sativa HOM05D004280 ORTHO05D005059 1.9e-39 166.4 151 53.0
Ah.04g157750 Amaranthus hybridus HOM05D004280 ORTHO05D005059 7.2e-39 164.5 149 55.0
Psat5g102320 Pisum sativum HOM05D004280 ORTHO05D005059 3.6e-38 162.2 151 54.3
Zm00001eb059570 Zea mays HOM05D004280 ORTHO05D005059 4.7e-38 161.8 149 55.0
HanXRQChr13g0405321 Helianthus annuus HOM05D004280 ORTHO05D005059 6.1e-38 161.4 150 54.7
Ah.04g157660 Amaranthus hybridus HOM05D004280 ORTHO05D005059 8.0e-38 161.0 149 55.0
Zm00001eb395740 Zea mays HOM05D004280 ORTHO05D005059 8.0e-38 161.0 150 53.3
Lalb_Chr08g0230321 Lupinus albus HOM05D004280 ORTHO05D005059 1.8e-37 159.8 167 50.9
AUR62032745 Chenopodium quinoa HOM05D004280 ORTHO05D005059 2.3e-37 159.5 133 57.9
SGA_v2.0_scaffold329G48825 Striga asiatica HOM05D004280 ORTHO05D005059 6.8e-37 157.9 140 59.3
SGA_v2.0_scaffold552G52891 Striga asiatica HOM05D004280 ORTHO05D005059 6.8e-37 157.9 140 59.3
SGA_v2.0_scaffold693G53465 Striga asiatica HOM05D004280 ORTHO05D005059 6.8e-37 157.9 140 59.3
SGA_v2.0_scaffold738G53541 Striga asiatica HOM05D004280 ORTHO05D005059 8.9e-37 157.5 140 59.3
Zm00001eb068820 Zea mays HOM05D004280 ORTHO05D005059 2.0e-36 156.4 143 54.5
AUR62015306 Chenopodium quinoa HOM05D004280 ORTHO05D005059 2.8e-35 152.5 122 59.0
SGA_v2.0_scaffold521G52700 Striga asiatica HOM05D004280 ORTHO05D005059 3.7e-35 152.1 156 53.2
SGA_v2.0_scaffold674G53431 Striga asiatica HOM05D004280 ORTHO05D005059 3.7e-35 152.1 156 53.2
HanXRQChr01g0021661 Helianthus annuus HOM05D004280 ORTHO05D005059 6.3e-35 151.4 122 60.7
PGSC0003DMG400009351 Solanum tuberosum HOM05D004280 ORTHO05D005059 2.4e-34 149.4 122 59.8
Os01g0648500 Oryza sativa ssp. japonica HOM05D004280 ORTHO05D005059 5.4e-34 148.3 135 54.8
Sed0016974 Sechium edule HOM05D004280 ORTHO05D005059 5.4e-34 148.3 145 52.4
SGA_v2.0_scaffold674G53436 Striga asiatica HOM05D004280 ORTHO05D005059 2.7e-33 146.0 156 51.9
Oeu059672.2 Olea europaea HOM05D004280 ORTHO05D005059 3.5e-33 145.6 130 56.2
Cc01_g02840 Coffea canephora HOM05D004280 ORTHO05D005059 4.3e-31 138.7 156 48.7
SGA_v2.0_scaffold2280G54098 Striga asiatica HOM05D004280 ORTHO05D005059 5.6e-31 138.3 111 63.1
Nitab4.5_0000131g0050 Nicotiana tabacum HOM05D004280 ORTHO05D005059 2.8e-30 136.0 106 60.4
Phvul.001G056500 Phaseolus vulgaris HOM05D004280 ORTHO05D005059 1.8e-29 133.3 101 63.4
AL1G63340 Arabidopsis lyrata HOM05D004280 ORTHO05D005059 8.9e-29 131.0 101 61.4
Haze_22967 Corylus avellana HOM05D004280 ORTHO05D005059 2.2e-27 126.3 106 58.5
SGA_v2.0_scaffold6G03409 Striga asiatica HOM05D004280 ORTHO05D005059 3.2e-26 122.5 101 60.4
Dinv13451 Davidia involucrata HOM05D004280 ORTHO05D005059 4.1e-26 122.1 89 66.3
Cc00_g23960 Coffea canephora HOM05D004280 ORTHO05D005059 2.0e-25 119.8 97 58.8
Cfa009582 Carpinus fangiana HOM05D004280 ORTHO05D005059 6.0e-25 118.2 171 43.9
Actinidia11301 Actinidia chinensis HOM05D004280 ORTHO05D005059 1.0e-24 117.5 91 62.6
Nitab4.5_0006954g0010 Nicotiana tabacum HOM05D004280 ORTHO05D005059 3.9e-24 115.5 84 63.1
Glyma.17G202802 Glycine max HOM05D004280 ORTHO05D005059 1.5e-20 103.6 82 62.2
Atru.chr7.1077 Acer truncatum HOM05D004280 ORTHO05D005059 3.4e-20 102.4 109 48.6
Zm00001eb211560 Zea mays HOM05D004280 ORTHO05D005059 1.9e-18 96.7 150 40.0
Cre01.g011200 Chlamydomonas reinhardtii HOM05D004280 ORTHO05D005059 6.0e-17 91.7 141 39.0
AagrBONN_evm.TU.Sc2ySwM_362.2805 Anthoceros agrestis HOM05D004280 ORTHO05D005059 8.6e-16 87.8 96 49.0
PRCOL_00003189 Prasinoderma coloniale HOM05D004280 ORTHO05D005059 8.6e-16 87.8 167 32.9
Sopen00g013070 Solanum pennellii HOM05D004280 ORTHO05D005059 4.7e-14 82.0 70 55.7
Cc00_g20490 Coffea canephora HOM05D004280 ORTHO05D005059 9.2e-10 67.8 64 50.0
Cfa024345 Carpinus fangiana HOM05D004280 ORTHO05D122617 1.2e-09 67.4 176 31.2
EL10Ac4g09635 Beta vulgaris HOM05D004280 ORTHO05D005059 1.7e-08 63.5 80 46.2


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