Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO165G0168 Selaginella moellendorffii HOM05D006382 ORTHO05D374182 0.0e+00 1077.0 522 100.0
SMO139G0016 Selaginella moellendorffii HOM05D006382 ORTHO05D376983 3.0e-136 489.6 447 61.3
SMO134G0292 Selaginella moellendorffii HOM05D006382 ORTHO05D008938 1.8e-51 208.0 284 47.9
Pp3c20_22770 Physcomitrium patens HOM05D006382 ORTHO05D008938 1.4e-32 145.2 277 35.7
SGA_v2.0_scaffold4G02278 Striga asiatica HOM05D006382 ORTHO05D008938 5.3e-32 143.3 280 35.4
Dinv43864 Davidia involucrata HOM05D006382 ORTHO05D008938 7.7e-31 139.4 280 33.9
Mapoly0179s0013 Marchantia polymorpha HOM05D006382 ORTHO05D008938 1.0e-30 139.0 281 36.7
Oeu063675.1 Olea europaea HOM05D006382 ORTHO05D008938 1.3e-30 138.7 280 34.3
Lsat_1_v5_gn_4_35160 Lactuca sativa HOM05D006382 ORTHO05D008938 2.2e-30 137.9 257 34.2
Potri.002G164700 Populus trichocarpa HOM05D006382 ORTHO05D008938 2.2e-30 137.9 280 34.3
vmacro13226 Vaccinium macrocarpon HOM05D006382 ORTHO05D008938 6.5e-30 136.3 280 33.6
MBI06_g33533_MAGBIO Magnolia biondii HOM05D006382 ORTHO05D008938 8.5e-30 136.0 278 34.5
Sabra02G0146800 Salix brachista HOM05D006382 ORTHO05D008938 8.5e-30 136.0 280 34.6
SalBow3G4256 Salvia bowleyana HOM05D006382 ORTHO05D008938 1.1e-29 135.6 277 34.3
Actinidia10076 Actinidia chinensis HOM05D006382 ORTHO05D008938 1.9e-29 134.8 267 34.1
Rhsim07G0010300 Rhododendron simsii HOM05D006382 ORTHO05D008938 1.9e-29 134.8 277 33.2
Lj9C589T7 Lonicera japonica HOM05D006382 ORTHO05D008938 2.5e-29 134.4 277 33.2
Hma1.2p1_0335F.1_g128860 Hydrangea macrophylla HOM05D006382 ORTHO05D008938 4.2e-29 133.7 277 33.2
Thecc.01G352300 Theobroma cacao HOM05D006382 ORTHO05D008938 5.5e-29 133.3 280 33.2
Actinidia20164 Actinidia chinensis HOM05D006382 ORTHO05D008938 7.2e-29 132.9 280 32.5
CiPaw.01G067600 Carya illinoinensis HOM05D006382 ORTHO05D008938 9.4e-29 132.5 279 33.0
Gohir.A11G092400 Gossypium hirsutum HOM05D006382 ORTHO05D008938 1.6e-28 131.7 280 33.6
Prupe.2G177700 Prunus persica HOM05D006382 ORTHO05D008938 2.7e-28 131.0 280 32.9
unitig_747.g21323 Utricularia gibba HOM05D000887 ORTHO05D000908 3.6e-28 130.6 285 33.7
CSS0031254 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 4.7e-28 130.2 290 32.1
Gorai.007G103500 Gossypium raimondii HOM05D006382 ORTHO05D008938 4.7e-28 130.2 281 33.5
TPR.G35789 Trifolium pratense HOM05D006382 ORTHO05D008938 4.7e-28 130.2 280 33.6
MSTRG.17299 Avicennia marina HOM05D006382 ORTHO05D008938 6.1e-28 129.8 277 32.5
CSS0000318 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 8.0e-28 129.4 283 32.9
Ciclev10019743m.g Citrus clementina HOM05D006382 ORTHO05D008938 8.0e-28 129.4 280 33.9
Duzib133G1372 Durio zibethinus HOM05D006382 ORTHO05D008938 8.0e-28 129.4 280 32.9
HanXRQChr17g0562131 Helianthus annuus HOM05D006382 ORTHO05D008938 1.0e-27 129.0 277 32.1
Medtr7g079030 Medicago truncatula HOM05D006382 ORTHO05D008938 1.4e-27 128.6 280 32.9
Atru.BG.55.p Acer truncatum HOM05D006382 ORTHO05D008938 1.8e-27 128.3 280 31.4
Atru.chr5.564 Acer truncatum HOM05D006382 ORTHO05D008938 1.8e-27 128.3 280 31.4
Nn1g01689 Nelumbo nucifera HOM05D006382 ORTHO05D008938 1.8e-27 128.3 282 32.6
Nitab4.5_0000915g0130 Nicotiana tabacum HOM05D006382 ORTHO05D008938 1.8e-27 128.3 280 34.3
RcHm_v2.0_Chr1g0357731 Rosa chinensis HOM05D006382 ORTHO05D008938 1.8e-27 128.3 280 31.8
Manes.05G029200 Manihot esculenta HOM05D006382 ORTHO05D008938 2.3e-27 127.9 94 62.8
Cfa003871 Carpinus fangiana HOM05D006382 ORTHO05D008938 3.0e-27 127.5 279 31.5
TWI59G0052 Tripterygium wilfordii HOM05D006382 ORTHO05D008938 3.0e-27 127.5 280 33.2
Aqoxy7G00230 Aquilegia oxysepala HOM05D006382 ORTHO05D008938 4.0e-27 127.1 277 32.1
Psat3g105480 Pisum sativum HOM05D006382 ORTHO05D008938 5.2e-27 126.7 280 33.2
GSVIVG01026968001 Vitis vinifera HOM05D006382 ORTHO05D008938 6.8e-27 126.3 284 32.4
PSO266G0056 Papaver somniferum HOM05D006382 ORTHO05D008938 8.8e-27 125.9 281 32.7
Cpa.g.sc11.72 Carica papaya HOM05D006382 ORTHO05D008938 1.2e-26 125.6 280 33.2
FAN01G1899 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.2e-26 125.6 280 31.4
Lalb_Chr19g0126881 Lupinus albus HOM05D006382 ORTHO05D008938 1.2e-26 125.6 280 31.8
QL04p055600 Quercus lobata HOM05D006382 ORTHO05D008938 2.6e-26 124.4 280 31.4
FvH4_7g15410 Fragaria vesca HOM05D006382 ORTHO05D008938 3.4e-26 124.0 280 31.4
MD01G1071500 Malus domestica HOM05D006382 ORTHO05D008938 3.4e-26 124.0 280 32.1
EL10Ac1g00353 Beta vulgaris HOM05D006382 ORTHO05D008938 4.4e-26 123.6 284 31.0
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 5.7e-26 123.2 280 31.4
Cc02_g38570 Coffea canephora HOM05D006382 ORTHO05D008938 7.5e-26 122.9 277 31.8
FAN06G2792 Fragaria x ananassa HOM05D006382 ORTHO05D008938 7.5e-26 122.9 280 31.4
Nitab4.5_0010695g0050 Nicotiana tabacum HOM05D006382 ORTHO05D008938 7.5e-26 122.9 296 32.8
CDE10G0280 Ceratophyllum demersum HOM05D006382 ORTHO05D008938 9.8e-26 122.5 277 31.4
Glyma.18G238400 Glycine max HOM05D006382 ORTHO05D008938 9.8e-26 122.5 280 30.7
HPP92_008800 Vanilla planifolia HOM05D006382 ORTHO05D008938 9.8e-26 122.5 277 30.7
Ca_07943_v3 Cicer arietinum L. HOM05D006382 ORTHO05D008938 1.3e-25 122.1 277 30.7
ClCG05G001220 Citrullus lanatus HOM05D006382 ORTHO05D008938 1.3e-25 122.1 277 31.0
PSO384G0256 Papaver somniferum HOM05D006382 ORTHO05D008938 1.3e-25 122.1 281 33.1
ATR0721G029 Amborella trichopoda HOM05D006382 ORTHO05D008938 1.7e-25 121.7 281 33.5
BcaB02g07372 Brassica carinata HOM05D006382 ORTHO05D008938 1.7e-25 121.7 277 32.9
CAN.G78.131 Capsicum annuum HOM05D006382 ORTHO05D008938 1.7e-25 121.7 282 33.7
CARHR171860 Cardamine hirsuta HOM05D006382 ORTHO05D008938 1.7e-25 121.7 280 32.1
Eucgr.D02325 Eucalyptus grandis HOM05D006382 ORTHO05D008938 1.7e-25 121.7 284 30.6
FAN06G0271 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.7e-25 121.7 280 31.1
Peaxi162Scf00020g01516 Petunia axillaris HOM05D006382 ORTHO05D008938 2.2e-25 121.3 284 32.4
THA.LOC104827604 Tarenaya hassleriana HOM05D006382 ORTHO05D008938 2.2e-25 121.3 277 30.7
VMungo1383G3370 Vigna mungo HOM05D006382 ORTHO05D008938 2.2e-25 121.3 280 31.4
AL5G43900 Arabidopsis lyrata HOM05D006382 ORTHO05D008938 2.8e-25 120.9 280 33.2
CANSAT56G1207 Cannabis sativa HOM05D006382 ORTHO05D008938 2.8e-25 120.9 279 31.2
MELO3C006077.2 Cucumis melo HOM05D006382 ORTHO05D008938 2.8e-25 120.9 277 31.0
Thhalv10005890m.g Eutrema salsugineum HOM05D006382 ORTHO05D008938 2.8e-25 120.9 280 32.9
AT3G61540 Arabidopsis thaliana HOM05D006382 ORTHO05D008938 3.7e-25 120.6 280 32.9
BraA07t30197Z Brassica rapa HOM05D006382 ORTHO05D008938 3.7e-25 120.6 280 32.5
CsaV3_3G008570 Cucumis sativus L. HOM05D006382 ORTHO05D008938 3.7e-25 120.6 277 31.0
Lj1g0001840 Lotus japonicus HOM05D006382 ORTHO05D008938 3.7e-25 120.6 280 33.2
Sed0009049 Sechium edule HOM05D006382 ORTHO05D008938 3.7e-25 120.6 281 31.7
Potri.014G090601 Populus trichocarpa HOM05D006382 ORTHO05D008938 4.8e-25 120.2 93 62.4
Carub.0005s2823 Capsella rubella HOM05D006382 ORTHO05D008938 6.3e-25 119.8 280 32.9
AUR62004414 Chenopodium quinoa HOM05D006382 ORTHO05D008938 6.3e-25 119.8 280 31.4
ECA234G1133 Erigeron canadensis HOM05D006382 ORTHO05D008938 6.3e-25 119.8 286 31.1
Phvul.008G058200 Phaseolus vulgaris HOM05D006382 ORTHO05D008938 6.3e-25 119.8 280 30.7
Gohir.D11G097200 Gossypium hirsutum HOM05D006382 ORTHO05D008938 8.3e-25 119.4 134 45.5
Sp5g01870 Schrenkiella parvula HOM05D006382 ORTHO05D008938 8.3e-25 119.4 280 32.5
Solyc01g095120.3 Solanum lycopersicum HOM05D006382 ORTHO05D008938 8.3e-25 119.4 280 32.1
Sopen01g038910 Solanum pennellii HOM05D006382 ORTHO05D008938 8.3e-25 119.4 280 32.1
Sc01g0003200 Simmondsia chinensis HOM05D006382 ORTHO05D008938 1.1e-24 119.0 277 28.9
BcaC08g45134 Brassica carinata HOM05D006382 ORTHO05D008938 1.4e-24 118.6 280 31.8
C06p27550 Brassica napus HOM05D006382 ORTHO05D008938 4.1e-24 117.1 280 32.5
A07p25560 Brassica napus HOM05D006382 ORTHO05D008938 5.4e-24 116.7 280 32.5
Glyma.09G254600 Glycine max HOM05D006382 ORTHO05D008938 5.4e-24 116.7 277 29.2
TAR629G1903 Trochodendron aralioides HOM05D006382 ORTHO05D008938 7.0e-24 116.3 130 46.2
BolC6t37923H Brassica oleracea HOM05D006382 ORTHO05D008938 3.5e-23 114.0 280 32.1
Haze_15566 Corylus avellana HOM05D006382 ORTHO05D008938 4.5e-23 113.6 94 57.4
DCAR_005361 Daucus carota HOM05D006382 ORTHO05D008938 5.9e-23 113.2 94 57.4
arahy.Tifrunner.gnm1.ann1.FF5BCH Arachis hypogaea HOM05D006382 ORTHO05D008938 1.0e-22 112.5 285 30.5
arahy.Tifrunner.gnm1.ann1.Z348XU Arachis hypogaea HOM05D006382 ORTHO05D008938 1.0e-22 112.5 285 30.5
Ah.05g180140 Amaranthus hybridus HOM05D006382 ORTHO05D008938 2.9e-22 110.9 137 45.3
Zm00001eb375690 Zea mays HOM05D006382 ORTHO05D008938 6.5e-22 109.8 107 52.3
Aa31LG10G15440 Aethionema arabicum HOM05D006382 ORTHO05D008938 1.1e-21 109.0 94 56.4
PGSC0003DMG400000065 Solanum tuberosum HOM05D006382 ORTHO05D008938 3.2e-21 107.5 94 56.4
AUR62022620 Chenopodium quinoa HOM05D006382 ORTHO05D008938 1.2e-20 105.5 96 54.2
CANSAT56G3955 Cannabis sativa HOM05D006382 ORTHO05D008938 4.7e-20 103.6 94 56.4
Cre03.g193700 Chlamydomonas reinhardtii HOM05D006382 ORTHO05D008938 1.0e-19 102.4 278 29.9
COL.COLO4_12779 Corchorus olitorius HOM05D006382 ORTHO05D008938 2.4e-16 91.3 252 30.2
Oeu063676.1 Olea europaea HOM05D006382 ORTHO05D008938 5.5e-13 80.1 94 50.0
MCO14G065 Micromonas commoda HOM05D006382 ORTHO05D008938 5.2e-11 73.6 124 37.1
Os06g0163600 Oryza sativa ssp. japonica HOM05D006382 ORTHO05D008938 5.4e-08 63.5 46 56.5
SMO145G0046 Selaginella moellendorffii HOM05D000103 ORTHO05D000049 1.2e-07 62.4 55 61.8
SMO145G0296 Selaginella moellendorffii HOM05D000103 ORTHO05D000049 4.6e-07 60.5 55 60.0
Migut.B01800 Erythranthe guttata HOM05D006382 ORTHO05D008938 8.6e-06 56.2 46 47.8


User provided reference genes

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