Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO165G0114 Selaginella moellendorffii HOM05D003650 ORTHO05D004213 0.0e+00 1299.3 625 100.0
SEGI_32089 Sequoiadendron giganteum HOM05D003650 ORTHO05D004213 2.2e-186 656.4 642 49.4
SMO329G0078 Selaginella moellendorffii HOM05D003650 ORTHO05D004213 2.7e-179 632.9 638 48.9
Pp3c14_20380 Physcomitrium patens HOM05D003650 ORTHO05D004213 6.5e-178 628.2 641 47.4
Pp3c17_18550 Physcomitrium patens HOM05D003650 ORTHO05D004213 7.2e-177 624.8 640 46.9
Mapoly0004s0304 Marchantia polymorpha HOM05D003650 ORTHO05D004213 3.4e-174 615.9 634 48.6
HPP92_012091 Vanilla planifolia HOM05D003650 ORTHO05D004213 1.0e-170 604.4 644 46.6
TWI74G1194 Tripterygium wilfordii HOM05D003650 ORTHO05D004213 1.7e-170 603.6 642 45.8
TWI77G0711 Tripterygium wilfordii HOM05D003650 ORTHO05D004213 2.3e-170 603.2 642 45.8
Potri.006G051000 Populus trichocarpa HOM05D003650 ORTHO05D004213 4.3e-169 599.0 641 45.9
TAR633G1518 Trochodendron aralioides HOM05D003650 ORTHO05D004213 5.6e-169 598.6 641 45.7
ATR0626G026 Amborella trichopoda HOM05D003650 ORTHO05D004213 7.3e-169 598.2 636 45.9
Aqoxy2G00151 Aquilegia oxysepala HOM05D003650 ORTHO05D004213 1.6e-168 597.0 644 46.4
Gohir.D09G118400 Gossypium hirsutum HOM05D003650 ORTHO05D004213 2.8e-168 596.3 643 46.8
Duzib093G1511 Durio zibethinus HOM05D003650 ORTHO05D004213 3.6e-168 595.9 643 46.2
AL5G38950 Arabidopsis lyrata HOM05D003650 ORTHO05D004213 6.1e-168 595.1 645 47.3
EL10Ac3g07088 Beta vulgaris HOM05D003650 ORTHO05D004213 6.1e-168 595.1 643 45.7
MSTRG.6431 Avicennia marina HOM05D003650 ORTHO05D004213 8.0e-168 594.7 641 46.0
Duzib205G0897 Durio zibethinus HOM05D003650 ORTHO05D004213 8.0e-168 594.7 642 46.3
Gohir.A09G122300 Gossypium hirsutum HOM05D003650 ORTHO05D004213 8.0e-168 594.7 643 47.0
AL4G40080 Arabidopsis lyrata HOM05D003650 ORTHO05D004213 1.4e-167 594.0 647 47.4
SalBow6G5443 Salvia bowleyana HOM05D003650 ORTHO05D004213 1.4e-167 594.0 640 45.9
HanXRQChr10g0288771 Helianthus annuus HOM05D003650 ORTHO05D004213 1.8e-167 593.6 643 46.5
PGR004G2044 Punica granatum HOM05D003650 ORTHO05D004213 1.8e-167 593.6 638 45.8
BraA03t11559Z Brassica rapa HOM05D003650 ORTHO05D004213 2.3e-167 593.2 645 46.7
Migut.J01760 Erythranthe guttata HOM05D003650 ORTHO05D004213 2.3e-167 593.2 641 44.9
Prupe.7G061300 Prunus persica HOM05D003650 ORTHO05D004213 2.3e-167 593.2 642 46.1
Gohir.A09G122200 Gossypium hirsutum HOM05D003650 ORTHO05D004213 3.0e-167 592.8 643 46.8
Phvul.007G252800 Phaseolus vulgaris HOM05D003650 ORTHO05D004213 3.0e-167 592.8 640 45.5
Sabra06G0035700 Salix brachista HOM05D003650 ORTHO05D004213 3.0e-167 592.8 641 45.1
Hund19149 Selenicereus undatus HOM05D003650 ORTHO05D004213 3.0e-167 592.8 640 46.1
Thecc.05G153700 Theobroma cacao HOM05D003650 ORTHO05D004213 3.0e-167 592.8 643 46.0
Carub.0004s2405 Capsella rubella HOM05D003650 ORTHO05D004213 4.0e-167 592.4 647 46.8
Gorai.006G136600 Gossypium raimondii HOM05D003650 ORTHO05D004213 4.0e-167 592.4 643 46.2
Ah.13g076450 Amaranthus hybridus HOM05D003650 ORTHO05D004213 5.2e-167 592.0 640 45.6
A03p23420 Brassica napus HOM05D003650 ORTHO05D004213 5.2e-167 592.0 645 46.7
CSS0035654 Camellia sinensis var. sinensis HOM05D003650 ORTHO05D004213 5.2e-167 592.0 641 45.6
Cpa.g.sc92.50 Carica papaya HOM05D003650 ORTHO05D004213 5.2e-167 592.0 642 46.1
Oeu027406.1 Olea europaea HOM05D003650 ORTHO05D004213 5.2e-167 592.0 639 46.0
TAR636G3054 Trochodendron aralioides HOM05D003650 ORTHO05D004213 5.2e-167 592.0 641 45.7
Duzib128G1026 Durio zibethinus HOM05D003650 ORTHO05D004213 6.8e-167 591.7 642 46.7
Eucgr.A02349 Eucalyptus grandis HOM05D003650 ORTHO05D004213 6.8e-167 591.7 643 46.0
AT2G41770 Arabidopsis thaliana HOM05D003650 ORTHO05D004213 8.9e-167 591.3 647 47.1
CANSAT80G2225 Cannabis sativa HOM05D003650 ORTHO05D004213 8.9e-167 591.3 644 45.2
Nitab4.5_0005195g0070 Nicotiana tabacum HOM05D003650 ORTHO05D004213 1.2e-166 590.9 641 44.9
Peaxi162Scf00130g00016 Petunia axillaris HOM05D003650 ORTHO05D004213 1.2e-166 590.9 638 45.0
CSS0046501 Camellia sinensis var. sinensis HOM05D003650 ORTHO05D004213 1.5e-166 590.5 641 45.4
COL.COLO4_28278 Corchorus olitorius HOM05D003650 ORTHO05D004213 1.5e-166 590.5 643 46.3
Nitab4.5_0000707g0190 Nicotiana tabacum HOM05D003650 ORTHO05D004213 1.5e-166 590.5 642 45.8
C03p27940 Brassica napus HOM05D003650 ORTHO05D004213 2.0e-166 590.1 645 46.4
BolC3t15166H Brassica oleracea HOM05D003650 ORTHO05D004213 2.0e-166 590.1 645 46.4
Manes.09G021900 Manihot esculenta HOM05D003650 ORTHO05D004213 3.4e-166 589.3 641 45.4
RcHm_v2.0_Chr3g0482321 Rosa chinensis HOM05D003650 ORTHO05D004213 3.4e-166 589.3 643 45.9
Carub.0005s2426 Capsella rubella HOM05D003650 ORTHO05D004213 4.4e-166 589.0 645 46.7
CiPaw.09G038100 Carya illinoinensis HOM05D003650 ORTHO05D004213 4.4e-166 589.0 642 45.6
MD12G1073600 Malus domestica HOM05D003650 ORTHO05D004213 4.4e-166 589.0 642 45.2
BcaNung02835 Brassica carinata HOM05D003650 ORTHO05D004213 5.8e-166 588.6 642 46.7
Manes.08G050700 Manihot esculenta HOM05D003650 ORTHO05D004213 5.8e-166 588.6 641 45.6
Ciclev10004391m.g Citrus clementina HOM05D003650 ORTHO05D004213 7.5e-166 588.2 640 45.5
CANSAT80G0970 Cannabis sativa HOM05D003650 ORTHO05D004213 9.8e-166 587.8 642 45.5
Lsat_1_v5_gn_9_29041 Lactuca sativa HOM05D003650 ORTHO05D004213 9.8e-166 587.8 640 45.8
Oeu008162.1 Olea europaea HOM05D003650 ORTHO05D004213 1.3e-165 587.4 638 45.6
CiPaw.10G033200 Carya illinoinensis HOM05D003650 ORTHO05D004213 2.2e-165 586.6 642 45.0
FAN05G4085 Fragaria x ananassa HOM05D003650 ORTHO05D004213 2.2e-165 586.6 645 45.9
Glyma.10G097600 Glycine max HOM05D003650 ORTHO05D004213 2.2e-165 586.6 640 44.7
QL07p000311 Quercus lobata HOM05D003650 ORTHO05D004213 2.2e-165 586.6 640 45.3
vmacro07855 Vaccinium macrocarpon HOM05D003650 ORTHO05D004213 2.2e-165 586.6 646 44.9
FvH4_6g23790 Fragaria vesca HOM05D003650 ORTHO05D004213 2.9e-165 586.3 645 45.9
A05p02520 Brassica napus HOM05D003650 ORTHO05D004213 3.7e-165 585.9 642 46.3
FAN14G5543 Fragaria x ananassa HOM05D003650 ORTHO05D004213 3.7e-165 585.9 645 45.7
PGSC0003DMG400027249 Solanum tuberosum HOM05D003650 ORTHO05D004213 3.7e-165 585.9 640 45.6
SGA_v2.0_scaffold69G23114 Striga asiatica HOM05D003650 ORTHO05D004213 3.7e-165 585.9 644 45.0
VMungo0720G2955 Vigna mungo HOM05D003650 ORTHO05D004213 3.7e-165 585.9 640 44.7
CSS0010444 Camellia sinensis var. sinensis HOM05D003650 ORTHO05D004213 4.9e-165 585.5 641 45.2
Thhalv10016286m.g Eutrema salsugineum HOM05D003650 ORTHO05D004213 4.9e-165 585.5 645 45.9
Solyc01g087600.3 Solanum lycopersicum HOM05D003650 ORTHO05D004213 4.9e-165 585.5 642 45.5
BraA05t19245Z Brassica rapa HOM05D003650 ORTHO05D004213 6.4e-165 585.1 642 46.3
arahy.Tifrunner.gnm1.ann1.YDMB1U Arachis hypogaea HOM05D003650 ORTHO05D004213 8.3e-165 584.7 640 45.2
ECA247G3671 Erigeron canadensis HOM05D003650 ORTHO05D004213 8.3e-165 584.7 641 45.1
FAN02G1020 Fragaria x ananassa HOM05D003650 ORTHO05D004213 8.3e-165 584.7 645 45.9
FAN09G0940 Fragaria x ananassa HOM05D003650 ORTHO05D004213 1.1e-164 584.3 645 45.7
Hma1.2p1_2002F.1_g310720 Hydrangea macrophylla HOM05D003650 ORTHO05D004213 1.1e-164 584.3 644 44.9
Lj5g0024914 Lotus japonicus HOM05D003650 ORTHO05D004213 1.1e-164 584.3 640 45.3
arahy.Tifrunner.gnm1.ann1.MS35EQ Arachis hypogaea HOM05D003650 ORTHO05D004213 1.4e-164 583.9 640 45.2
Psat6g120000 Pisum sativum HOM05D003650 ORTHO05D004213 1.4e-164 583.9 640 44.4
Sabra16G0058400 Salix brachista HOM05D003650 ORTHO05D004213 1.4e-164 583.9 640 44.1
Sopen01g034570 Solanum pennellii HOM05D003650 ORTHO05D004213 1.4e-164 583.9 642 45.5
AT3G57420 Arabidopsis thaliana HOM05D003650 ORTHO05D004213 1.9e-164 583.6 645 46.8
Lalb_Chr06g0173451 Lupinus albus HOM05D003650 ORTHO05D004213 1.9e-164 583.6 640 44.8
HanXRQChr01g0008741 Helianthus annuus HOM05D003650 ORTHO05D004213 2.4e-164 583.2 642 45.3
Sopen04g007820 Solanum pennellii HOM05D003650 ORTHO05D004213 2.4e-164 583.2 639 44.9
C04p02980 Brassica napus HOM05D003650 ORTHO05D004213 3.2e-164 582.8 642 46.3
Nitab4.5_0008441g0020 Nicotiana tabacum HOM05D003650 ORTHO05D004213 3.2e-164 582.8 644 45.0
Sp4g24040 Schrenkiella parvula HOM05D003650 ORTHO05D004213 3.2e-164 582.8 645 45.9
MD14G1071900 Malus domestica HOM05D003650 ORTHO05D004213 4.1e-164 582.4 642 45.2
Potri.016G055700 Populus trichocarpa HOM05D003650 ORTHO05D004213 4.1e-164 582.4 638 44.2
CAN.G219.62 Capsicum annuum HOM05D003650 ORTHO05D004213 5.4e-164 582.0 642 45.0
CARHR136860 Cardamine hirsuta HOM05D003650 ORTHO05D004213 5.4e-164 582.0 647 46.2
PSO339G5560 Papaver somniferum HOM05D003650 ORTHO05D004213 7.0e-164 581.6 644 46.1
BolC4t21937H Brassica oleracea HOM05D003650 ORTHO05D004213 9.2e-164 581.3 638 46.4
CARHR167620 Cardamine hirsuta HOM05D003650 ORTHO05D004213 9.2e-164 581.3 647 46.4
Thhalv10005801m.g Eutrema salsugineum HOM05D003650 ORTHO05D004213 1.2e-163 580.9 648 46.1
TPR.G10642 Trifolium pratense HOM05D003650 ORTHO05D004213 1.6e-163 580.5 640 44.4
GSVIVG01033278001 Vitis vinifera HOM05D003650 ORTHO05D004213 1.6e-163 580.5 642 44.9
DCAR_013601 Daucus carota HOM05D003650 ORTHO05D004213 2.0e-163 580.1 641 44.9
Zm00001eb287230 Zea mays HOM05D003650 ORTHO05D004213 2.0e-163 580.1 642 44.1
ClCG10G016580 Citrullus lanatus HOM05D003650 ORTHO05D004213 2.7e-163 579.7 642 44.9
Glyma.02G184100 Glycine max HOM05D003650 ORTHO05D004213 2.7e-163 579.7 640 44.5
Sp5g05180 Schrenkiella parvula HOM05D003650 ORTHO05D004213 2.7e-163 579.7 644 46.1
Ca_26017_v3 Cicer arietinum L. HOM05D003650 ORTHO05D004213 3.5e-163 579.3 641 45.2
RcHm_v2.0_Chr1g0317301 Rosa chinensis HOM05D003650 ORTHO05D004213 3.5e-163 579.3 642 44.9
AUR62026036 Chenopodium quinoa HOM05D003650 ORTHO05D004213 4.6e-163 578.9 642 45.0
Prupe.2G020200 Prunus persica HOM05D003650 ORTHO05D004213 4.6e-163 578.9 642 45.2
MELO3C009717.2 Cucumis melo HOM05D003650 ORTHO05D004213 6.0e-163 578.6 642 44.4
Aa31LG1G23780 Aethionema arabicum HOM05D003650 ORTHO05D004213 7.8e-163 578.2 645 45.1
Nitab4.5_0010636g0040 Nicotiana tabacum HOM05D003650 ORTHO05D004213 1.0e-162 577.8 664 43.1
Ah.04g151780 Amaranthus hybridus HOM05D003650 ORTHO05D004213 1.3e-162 577.4 652 44.5
Lalb_Chr20g0110481 Lupinus albus HOM05D003650 ORTHO05D004213 1.3e-162 577.4 643 45.4
MD07G1018300 Malus domestica HOM05D003650 ORTHO05D004213 1.3e-162 577.4 643 44.6
Rhsim07G0058200 Rhododendron simsii HOM05D003650 ORTHO05D004213 1.7e-162 577.0 642 44.4
PSO384G3418 Papaver somniferum HOM05D003650 ORTHO05D004213 3.0e-162 576.2 644 45.5
HPP92_010728 Vanilla planifolia HOM05D003650 ORTHO05D004213 3.0e-162 576.2 635 44.7
AUR62024446 Chenopodium quinoa HOM05D003650 ORTHO05D004213 3.9e-162 575.9 642 44.9
Lj2A385G21 Lonicera japonica HOM05D003650 ORTHO05D004213 3.9e-162 575.9 643 44.2
THA.LOC104802108 Tarenaya hassleriana HOM05D003650 ORTHO05D004213 8.6e-162 574.7 646 45.2
PGSC0003DMG400006853 Solanum tuberosum HOM05D003650 ORTHO05D004213 1.1e-161 574.3 665 43.9
Sed0014274 Sechium edule HOM05D003650 ORTHO05D004213 1.5e-161 573.9 642 44.9
Sc13g0001770 Simmondsia chinensis HOM05D003650 ORTHO05D004213 3.3e-161 572.8 642 43.0
CAN.G676.68 Capsicum annuum HOM05D003650 ORTHO05D004213 4.3e-161 572.4 650 44.2
Peaxi162Scf00694g00117 Petunia axillaris HOM05D003650 ORTHO05D004213 5.6e-161 572.0 642 44.5
ECA248G2213 Erigeron canadensis HOM05D003650 ORTHO05D004213 9.5e-161 571.2 643 44.2
Cc02_g29000 Coffea canephora HOM05D003650 ORTHO05D004213 1.2e-160 570.9 642 45.0
Cc06_g17090 Coffea canephora HOM05D003650 ORTHO05D004213 1.2e-160 570.9 643 43.7
vmacro13691 Vaccinium macrocarpon HOM05D003650 ORTHO05D004213 2.1e-160 570.1 642 44.1
CDE07G0124 Ceratophyllum demersum HOM05D003650 ORTHO05D004213 1.1e-159 567.8 643 44.5
FvH4_7g01460 Fragaria vesca HOM05D003650 ORTHO05D004213 1.1e-159 567.8 645 45.0
FAN06G0077 Fragaria x ananassa HOM05D003650 ORTHO05D004213 1.2e-158 564.3 645 44.7
Lsat_1_v5_gn_5_161461 Lactuca sativa HOM05D003650 ORTHO05D004213 2.0e-158 563.5 640 44.4
unitig_749.g14146 Utricularia gibba HOM05D003650 ORTHO05D004213 3.4e-158 562.8 620 44.5
Actinidia09330 Actinidia chinensis HOM05D003650 ORTHO05D004213 1.7e-157 560.5 642 43.1
Actinidia39226 Actinidia chinensis HOM05D003650 ORTHO05D004213 4.9e-157 558.9 637 43.6
Haze_19859 Corylus avellana HOM05D003650 ORTHO05D004213 1.6e-155 553.9 721 39.9
Rhsim03G0022300 Rhododendron simsii HOM05D003650 ORTHO05D004213 7.8e-155 551.6 710 40.6
Zm00001eb329540 Zea mays HOM05D003650 ORTHO05D004213 7.8e-155 551.6 637 43.8
Atru.chr1.1095 Acer truncatum HOM05D003650 ORTHO05D004213 8.6e-154 548.1 610 44.8
ClCG09G003920 Citrullus lanatus HOM05D003650 ORTHO05D004213 8.6e-154 548.1 640 42.5
Os07g0656400 Oryza sativa ssp. japonica HOM05D003650 ORTHO05D004213 1.5e-153 547.4 637 43.5
CANSAT80G1317 Cannabis sativa HOM05D003650 ORTHO05D004213 5.6e-153 545.4 571 47.1
MELO3C023570.2 Cucumis melo HOM05D003650 ORTHO05D004213 4.7e-152 542.3 640 41.9
CsaV3_7G030820 Cucumis sativus L. HOM05D003650 ORTHO05D004213 2.3e-151 540.0 640 41.9
Lju124C41T4 Lonicera japonica HOM05D003650 ORTHO05D004213 9.9e-150 534.6 600 44.7
Sed0006713 Sechium edule HOM05D003650 ORTHO05D004213 8.3e-149 531.6 646 42.0
Nn7g36273 Nelumbo nucifera HOM05D003650 ORTHO05D004213 1.9e-148 530.4 647 42.3
Rhsim03G0021200 Rhododendron simsii HOM05D003650 ORTHO05D004213 1.5e-145 520.8 784 36.9
Dinv09321 Davidia involucrata HOM05D003650 ORTHO05D004213 7.3e-145 518.5 482 50.2
FAN10G4002 Fragaria x ananassa HOM05D003650 ORTHO05D004213 3.6e-144 516.2 645 42.6
Nn2g15253 Nelumbo nucifera HOM05D003650 ORTHO05D004213 1.3e-141 507.7 482 50.0
Dinv12480 Davidia involucrata HOM05D003650 ORTHO05D004213 8.4e-141 505.0 491 48.9
Solyc04g015740.3 Solanum lycopersicum HOM05D003650 ORTHO05D004213 1.6e-139 500.7 633 40.9
Gohir.D09G118300 Gossypium hirsutum HOM05D003650 ORTHO05D004213 3.6e-136 489.6 546 45.1
CDE11G0464 Ceratophyllum demersum HOM05D003650 ORTHO05D004213 2.0e-134 483.8 613 41.3
Gorai.006G136700 Gossypium raimondii HOM05D003650 ORTHO05D004213 4.6e-131 472.6 636 40.6
Medtr0121s0010 Medicago truncatula HOM05D003650 ORTHO05D004213 1.3e-130 471.1 438 52.3
Oeu023110.1 Olea europaea HOM05D003650 ORTHO05D004213 9.0e-127 458.4 435 50.3
CsaV3_3G039750 Cucumis sativus L. HOM05D003650 ORTHO05D004213 5.6e-113 412.5 367 52.6
Os05g0391200 Oryza sativa ssp. japonica HOM05D003650 ORTHO05D004213 3.5e-107 393.3 458 41.9
GSVIVG01032164001 Vitis vinifera HOM05D003650 ORTHO05D004213 9.4e-100 368.6 444 40.1
Sed0014161 Sechium edule HOM05D003650 ORTHO05D004213 2.7e-91 340.5 619 33.6
BcaNung06246 Brassica carinata HOM05D003650 ORTHO05D004213 3.6e-91 340.1 270 59.3
Dinv39600 Davidia involucrata HOM05D003650 ORTHO05D004213 9.7e-81 305.4 632 31.2
unitig_26.g9047 Utricularia gibba HOM05D003650 ORTHO05D004213 9.1e-71 272.3 231 55.8
unitig_26.g9048 Utricularia gibba HOM05D003650 ORTHO05D004213 4.1e-55 220.3 341 36.4
CDE11G0987 Ceratophyllum demersum HOM05D003650 ORTHO05D004213 2.3e-45 188.0 231 42.0
AL4G39860 Arabidopsis lyrata HOM05D003650 ORTHO05D004213 4.4e-41 173.7 161 56.5
Actinidia02535 Actinidia chinensis HOM05D003650 ORTHO05D004213 1.7e-40 171.8 270 37.4
CARHR167370 Cardamine hirsuta HOM05D003650 ORTHO05D004213 2.9e-40 171.0 137 55.5
CDE11G0341 Ceratophyllum demersum HOM05D003650 ORTHO05D004213 1.5e-36 158.7 186 40.3
AL4G39870 Arabidopsis lyrata HOM05D003650 ORTHO05D004213 2.4e-31 141.4 168 39.3
Cre06.g260650 Chlamydomonas reinhardtii HOM05D003650 ORTHO05D004213 8.9e-26 122.9 345 29.6
Cre18.g748697 Chlamydomonas reinhardtii HOM05D003650 ORTHO05D004213 9.6e-20 102.8 295 30.2
Oeu022754.1 Olea europaea HOM05D003650 ORTHO05D004213 4.2e-15 87.4 134 33.6
CDE06G0299 Ceratophyllum demersum HOM05D000016 ORTHO05D000487 1.2e-14 85.9 70 51.4
Rhsim03G0147000 Rhododendron simsii HOM05D003650 ORTHO05D004213 8.1e-11 73.2 63 52.4
Lalb_Chr21g0316481 Lupinus albus HOM05D003650 ORTHO05D004213 4.0e-10 70.9 111 35.1
Actinidia19412 Actinidia chinensis HOM05D003650 ORTHO05D004213 9.0e-10 69.7 92 34.8
RhsimUnG0102900 Rhododendron simsii HOM05D002707 ORTHO05D002925 5.8e-09 67.0 56 53.6


User provided reference genes

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