Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 3.6e-63 245.0 145 100.0
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 3.1e-38 162.2 125 75.2
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 1.3e-36 156.8 139 69.8
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 3.8e-36 155.2 116 78.4
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 1.2e-34 150.2 115 74.8
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 2.3e-33 146.0 139 68.3
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 6.7e-33 144.4 137 65.7
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 8.7e-33 144.1 115 74.8
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 8.7e-33 144.1 115 74.8
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 8.7e-33 144.1 115 74.8
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 1.5e-32 143.3 145 61.4
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 1.9e-32 142.9 139 66.2
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 4.3e-32 141.7 115 73.0
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 5.6e-32 141.4 128 65.6
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 7.4e-32 141.0 115 74.8
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 7.4e-32 141.0 142 63.4
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 7.4e-32 141.0 145 60.7
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 7.4e-32 141.0 127 69.3
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 7.4e-32 141.0 115 71.3
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 9.6e-32 140.6 115 70.4
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 9.6e-32 140.6 128 68.8
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 9.6e-32 140.6 115 73.9
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 1.3e-31 140.2 157 61.1
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 1.6e-31 139.8 143 62.9
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 1.6e-31 139.8 138 64.5
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 2.1e-31 139.4 141 60.3
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 2.8e-31 139.0 154 61.7
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 2.8e-31 139.0 115 72.2
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 2.8e-31 139.0 139 64.0
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 2.8e-31 139.0 114 71.1
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 2.8e-31 139.0 115 73.0
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 3.7e-31 138.7 115 73.0
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 3.7e-31 138.7 143 63.6
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 4.8e-31 138.3 144 63.9
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 6.2e-31 137.9 115 70.4
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 6.2e-31 137.9 115 73.0
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 6.2e-31 137.9 146 61.0
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 8.1e-31 137.5 115 70.4
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 8.1e-31 137.5 115 71.3
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 1.1e-30 137.1 115 71.3
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 1.1e-30 137.1 156 58.3
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 1.4e-30 136.7 147 59.9
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 1.4e-30 136.7 115 71.3
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 1.4e-30 136.7 145 60.0
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 1.8e-30 136.3 141 62.4
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 1.8e-30 136.3 115 70.4
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 1.8e-30 136.3 141 62.4
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 2.4e-30 136.0 111 72.1
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 2.4e-30 136.0 115 70.4
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 3.1e-30 135.6 115 71.3
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 3.1e-30 135.6 142 60.6
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 4.0e-30 135.2 115 69.6
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 4.0e-30 135.2 115 69.6
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 6.9e-30 134.4 115 69.6
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 6.9e-30 134.4 115 70.4
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 9.0e-30 134.0 142 61.3
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 9.0e-30 134.0 115 70.4
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 9.0e-30 134.0 148 59.5
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 9.0e-30 134.0 151 60.9
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 1.2e-29 133.7 145 60.7
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 1.5e-29 133.3 141 63.1
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 2.0e-29 132.9 138 61.6
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 2.0e-29 132.9 138 63.8
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 2.0e-29 132.9 143 62.9
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 4.5e-29 131.7 111 71.2
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 5.8e-29 131.3 138 63.0
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 5.8e-29 131.3 132 65.9
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 7.6e-29 131.0 111 70.3
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 7.6e-29 131.0 126 66.7
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 9.9e-29 130.6 111 70.3
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 9.9e-29 130.6 138 61.6
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 6.4e-28 127.9 140 61.4
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 1.1e-27 127.1 135 59.3
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 4.2e-27 125.2 107 72.0
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 7.1e-27 124.4 108 70.4
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 9.3e-27 124.0 108 69.4
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 9.3e-27 124.0 138 59.4
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 1.2e-26 123.6 137 60.6
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 1.6e-26 123.2 132 60.6
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 2.1e-26 122.9 108 69.4
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 2.7e-26 122.5 105 70.5
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 2.7e-26 122.5 178 38.8
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 4.6e-26 121.7 107 67.3
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 1.0e-25 120.6 104 69.2
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 1.0e-25 120.6 104 69.2
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 1.0e-25 120.6 104 69.2
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 1.3e-25 120.2 104 69.2
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 1.3e-25 120.2 104 69.2
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 1.3e-25 120.2 104 69.2
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 1.3e-25 120.2 104 69.2
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 1.3e-25 120.2 104 69.2
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 3.9e-25 118.6 115 65.2
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 3.7e-23 112.1 116 60.3
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 2.9e-20 102.4 94 53.2
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 7.9e-18 94.4 147 40.1
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 8.7e-17 90.9 122 54.9
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 1.9e-16 89.7 136 37.5
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 1.3e-15 87.0 55 69.1
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 3.7e-15 85.5 100 44.0
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 3.7e-15 85.5 56 64.3
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 4.8e-15 85.1 153 35.3
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 6.5e-12 74.7 80 45.0
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 3.6e-10 68.9 116 36.2
Hund05201 Selenicereus undatus HOM05D007166 ORTHO05D009039 4.8e-07 58.5 59 45.8
ATR0912G003 Amborella trichopoda HOM05D007166 ORTHO05D009039 1.4e-06 57.0 60 43.3


User provided reference genes

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