Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 8.2e-195 683.7 388 100.0
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 7.4e-55 218.8 287 50.2
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 2.4e-53 213.8 286 53.8
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 2.4e-53 213.8 291 49.1
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 7.0e-53 212.2 286 55.9
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 1.2e-52 211.5 277 56.7
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 1.2e-52 211.5 277 56.7
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 1.2e-52 211.5 338 45.3
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 1.5e-52 211.1 290 50.3
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.5e-52 211.1 274 51.5
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 1.5e-52 211.1 278 51.1
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 1.5e-52 211.1 338 45.6
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 2.0e-52 210.7 278 52.9
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 2.0e-52 210.7 292 47.9
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 4.5e-52 209.5 286 55.6
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 4.5e-52 209.5 278 52.5
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 7.7e-52 208.8 295 45.1
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 1.0e-51 208.4 290 47.6
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 1.3e-51 208.0 319 46.7
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 1.7e-51 207.6 288 50.3
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 3.8e-51 206.5 279 52.7
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 3.8e-51 206.5 277 51.6
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 3.8e-51 206.5 278 49.6
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 5.0e-51 206.1 323 53.3
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 5.0e-51 206.1 334 47.0
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 1.9e-50 204.1 289 50.5
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 2.5e-50 203.8 273 49.8
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 4.2e-50 203.0 288 47.6
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 5.5e-50 202.6 296 54.1
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 9.4e-50 201.8 327 43.4
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 1.2e-49 201.4 323 52.6
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 1.2e-49 201.4 323 52.6
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 1.6e-49 201.1 277 52.0
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 2.1e-49 200.7 300 48.3
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 3.6e-49 199.9 323 52.3
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 1.0e-48 198.4 289 48.4
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 1.0e-48 198.4 279 51.3
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 1.4e-48 198.0 273 48.4
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 1.4e-48 198.0 288 48.3
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 1.8e-48 197.6 274 48.9
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 2.3e-48 197.2 332 44.0
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 3.9e-48 196.4 276 49.6
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 8.8e-48 195.3 298 44.3
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 1.1e-47 194.9 333 43.8
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 3.3e-47 193.4 340 44.1
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 3.3e-47 193.4 286 47.2
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 4.4e-47 193.0 303 45.2
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 5.7e-47 192.6 275 47.6
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 7.4e-47 192.2 291 45.4
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 7.4e-47 192.2 340 42.4
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 9.7e-47 191.8 360 41.9
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 3.7e-46 189.9 291 49.5
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 8.2e-46 188.7 247 53.4
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 1.1e-45 188.3 275 47.3
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 1.1e-45 188.3 289 48.1
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 1.1e-45 188.3 305 43.9
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 2.4e-45 187.2 330 45.5
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 4.1e-45 186.4 313 43.1
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 4.1e-45 186.4 298 47.0
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 7.0e-45 185.7 291 47.8
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 7.0e-45 185.7 316 42.7
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 9.1e-45 185.3 320 43.1
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 1.2e-44 184.9 331 43.2
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 1.6e-44 184.5 290 45.9
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 2.6e-44 183.7 303 46.9
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 4.5e-44 183.0 327 49.8
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 4.5e-44 183.0 276 46.7
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 2.9e-43 180.3 275 47.3
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 1.1e-42 178.3 294 46.3
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 1.9e-42 177.6 356 40.2
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 4.0e-40 169.9 327 40.4
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 5.2e-40 169.5 275 49.1
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 6.8e-40 169.1 231 51.1
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 6.8e-40 169.1 314 40.4
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 2.6e-39 167.2 356 39.6
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 4.4e-39 166.4 323 47.4
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 5.7e-39 166.0 295 47.5
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 1.3e-38 164.9 283 42.8
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 1.7e-38 164.5 277 48.7
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 1.8e-37 161.0 346 44.2
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 7.0e-37 159.1 255 45.9
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 1.2e-36 158.3 332 43.7
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 1.7e-35 154.5 292 47.6
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 4.2e-34 149.8 279 41.6
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 2.1e-33 147.5 291 42.6
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 8.0e-33 145.6 288 46.5
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 1.8e-32 144.4 302 40.7
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 1.5e-31 141.4 321 43.0
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 5.7e-31 139.4 271 45.4
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 1.3e-30 138.3 331 35.6
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 2.4e-29 134.0 338 34.3
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 2.4e-29 134.0 267 42.3
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 1.6e-28 131.3 299 36.5
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 4.5e-28 129.8 313 40.9
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 1.1e-26 125.2 251 39.4
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 5.5e-26 122.9 227 42.7
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 3.6e-25 120.2 187 43.9
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 6.8e-24 115.9 94 71.3
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 3.4e-23 113.6 266 36.8
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 7.5e-23 112.5 216 43.5
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 1.3e-22 111.7 251 37.8
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 1.1e-21 108.6 251 37.5
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 9.2e-21 105.5 246 39.0
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 2.9e-19 100.5 254 37.8
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 6.1e-17 92.8 311 30.9
TPR.G34755 Trifolium pratense HOM05D006889 ORTHO05D008614 1.2e-15 88.6 62 72.6
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 2.9e-14 84.0 150 46.7
PRCOL_00000609 Prasinoderma coloniale HOM05D006889 ORTHO05D008614 1.6e-12 78.2 125 40.0
SHI02511 Sapria himalayana HOM05D006889 ORTHO05D008614 2.7e-12 77.4 66 63.6
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 5.0e-11 73.2 174 42.0
Cre17.g728200 Chlamydomonas reinhardtii HOM05D006889 ORTHO05D008614 4.3e-10 70.1 293 29.0
MCO15G439 Micromonas commoda HOM05D006889 ORTHO05D008614 5.6e-10 69.7 313 30.0
SHI02510 Sapria himalayana HOM05D006889 ORTHO05D008614 1.5e-07 61.6 50 56.0


User provided reference genes

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