Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO165G0032 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 4.2e-130 468.0 229 100.0
Haze_11491 Corylus avellana HOM05D006155 ORTHO05D007529 2.3e-72 276.2 215 63.7
Cfa014810 Carpinus fangiana HOM05D006155 ORTHO05D007529 2.6e-71 272.7 215 62.8
CANSAT78G1287 Cannabis sativa HOM05D006155 ORTHO05D007529 5.7e-71 271.6 219 61.2
AL4G28890 Arabidopsis lyrata HOM05D006155 ORTHO05D007529 1.3e-70 270.4 215 62.3
Eucgr.H02890 Eucalyptus grandis HOM05D006155 ORTHO05D007529 1.3e-70 270.4 220 62.7
Carub.0004s1472 Capsella rubella HOM05D006155 ORTHO05D007529 1.7e-70 270.0 215 61.9
Prupe.1G052300 Prunus persica HOM05D006155 ORTHO05D007529 1.7e-70 270.0 215 62.3
GSVIVG01027954001 Vitis vinifera HOM05D006155 ORTHO05D007529 1.7e-70 270.0 221 60.2
COL.COLO4_15996 Corchorus olitorius HOM05D006155 ORTHO05D007529 2.2e-70 269.6 213 62.4
Os02g0816100 Oryza sativa ssp. japonica HOM05D006155 ORTHO05D007529 2.2e-70 269.6 222 62.2
Sp4g15560 Schrenkiella parvula HOM05D006155 ORTHO05D007529 2.2e-70 269.6 212 63.2
Gorai.011G180400 Gossypium raimondii HOM05D006155 ORTHO05D007529 2.8e-70 269.2 217 62.7
AT2G33255 Arabidopsis thaliana HOM05D006155 ORTHO05D007529 3.7e-70 268.9 212 62.7
HanXRQChr01g0022501 Helianthus annuus HOM05D006155 ORTHO05D007529 4.8e-70 268.5 216 59.3
Aqoxy2G03758 Aquilegia oxysepala HOM05D006155 ORTHO05D007529 6.3e-70 268.1 213 62.0
FvH4_4g05140 Fragaria vesca HOM05D006155 ORTHO05D007529 6.3e-70 268.1 215 61.9
Gohir.D10G160700 Gossypium hirsutum HOM05D006155 ORTHO05D007529 6.3e-70 268.1 217 62.2
PGR004G1196 Punica granatum HOM05D006155 ORTHO05D007529 6.3e-70 268.1 221 60.6
EL10Ac3g06713 Beta vulgaris HOM05D006155 ORTHO05D007529 8.2e-70 267.7 216 61.1
Thhalv10017161m.g Eutrema salsugineum HOM05D006155 ORTHO05D007529 8.2e-70 267.7 215 60.9
FAN12G3888 Fragaria x ananassa HOM05D006155 ORTHO05D007529 8.2e-70 267.7 215 61.9
Lsat_1_v5_gn_1_76101 Lactuca sativa HOM05D006155 ORTHO05D007529 8.2e-70 267.7 216 59.3
A03p18670 Brassica napus HOM05D006155 ORTHO05D007529 1.1e-69 267.3 215 61.4
Cc03_g06750 Coffea canephora HOM05D006155 ORTHO05D007529 1.4e-69 266.9 218 59.2
MD16G1230400 Malus domestica HOM05D006155 ORTHO05D007529 1.4e-69 266.9 215 61.9
TWI09G0038 Tripterygium wilfordii HOM05D006155 ORTHO05D007529 1.4e-69 266.9 212 62.7
arahy.Tifrunner.gnm1.ann1.NLE1X5 Arachis hypogaea HOM05D006155 ORTHO05D007529 1.8e-69 266.5 212 61.3
BcaC01g05849 Brassica carinata HOM05D006155 ORTHO05D007529 1.8e-69 266.5 215 61.9
C03p21810 Brassica napus HOM05D006155 ORTHO05D007529 1.8e-69 266.5 215 61.9
BraA04t18060Z Brassica rapa HOM05D006155 ORTHO05D007529 1.8e-69 266.5 215 61.4
CARHR127260 Cardamine hirsuta HOM05D006155 ORTHO05D007529 1.8e-69 266.5 215 61.4
Gohir.A10G106500 Gossypium hirsutum HOM05D006155 ORTHO05D007529 1.8e-69 266.5 217 61.8
Oeu023143.1 Olea europaea HOM05D006155 ORTHO05D007529 1.8e-69 266.5 215 59.5
BolC3t14563H Brassica oleracea HOM05D006155 ORTHO05D007529 2.4e-69 266.2 215 61.9
Thecc.04G268500 Theobroma cacao HOM05D006155 ORTHO05D007529 2.4e-69 266.2 212 62.3
Lalb_Chr02g0150741 Lupinus albus HOM05D006155 ORTHO05D007529 3.1e-69 265.8 212 61.3
Oeu055271.1 Olea europaea HOM05D006155 ORTHO05D007529 3.1e-69 265.8 215 59.5
Ah.13g074940 Amaranthus hybridus HOM05D006155 ORTHO05D007529 4.1e-69 265.4 215 60.5
BcaC02g07846 Brassica carinata HOM05D006155 ORTHO05D007529 4.1e-69 265.4 215 61.4
C04p62700 Brassica napus HOM05D006155 ORTHO05D007529 4.1e-69 265.4 215 61.4
BolC4t27754H Brassica oleracea HOM05D006155 ORTHO05D007529 4.1e-69 265.4 215 61.4
BcaB06g28663 Brassica carinata HOM05D006155 ORTHO05D007529 5.3e-69 265.0 215 60.9
BcaC02g07849 Brassica carinata HOM05D006155 ORTHO05D007529 5.3e-69 265.0 215 60.9
Phvul.L001872 Phaseolus vulgaris HOM05D006155 ORTHO05D007529 5.3e-69 265.0 220 60.5
Actinidia35935 Actinidia chinensis HOM05D006155 ORTHO05D007529 7.0e-69 264.6 215 60.0
arahy.Tifrunner.gnm1.ann1.L647M7 Arachis hypogaea HOM05D006155 ORTHO05D007529 7.0e-69 264.6 212 60.8
Ciclev10005577m.g Citrus clementina HOM05D006155 ORTHO05D007529 7.0e-69 264.6 218 59.2
Dinv27131 Davidia involucrata HOM05D006155 ORTHO05D007529 7.0e-69 264.6 212 60.4
Hund20478 Selenicereus undatus HOM05D006155 ORTHO05D007529 7.0e-69 264.6 205 63.4
Actinidia32965 Actinidia chinensis HOM05D006155 ORTHO05D007529 9.1e-69 264.2 217 58.5
BraA03t11126Z Brassica rapa HOM05D006155 ORTHO05D007529 9.1e-69 264.2 215 60.9
Migut.N00320 Erythranthe guttata HOM05D006155 ORTHO05D007529 1.6e-68 263.5 217 58.1
RcHm_v2.0_Chr4g0396071 Rosa chinensis HOM05D006155 ORTHO05D007529 1.6e-68 263.5 215 60.0
Aa31LG5G4150 Aethionema arabicum HOM05D006155 ORTHO05D007529 2.6e-68 262.7 215 60.9
Manes.15G047200 Manihot esculenta HOM05D006155 ORTHO05D007529 2.6e-68 262.7 215 60.5
Sabra10G0043200 Salix brachista HOM05D006155 ORTHO05D007529 3.5e-68 262.3 212 61.3
PGSC0003DMG400001560 Solanum tuberosum HOM05D006155 ORTHO05D007529 4.5e-68 261.9 214 59.8
Lj6C638T14 Lonicera japonica HOM05D006155 ORTHO05D007529 5.9e-68 261.5 215 58.6
SalBow3G4628 Salvia bowleyana HOM05D006155 ORTHO05D007529 5.9e-68 261.5 218 58.3
Atru.chr4.1882 Acer truncatum HOM05D006155 ORTHO05D007529 7.7e-68 261.2 212 61.8
Sopen09g033690 Solanum pennellii HOM05D006155 ORTHO05D007529 7.7e-68 261.2 214 59.3
Solyc09g090750.3 Solanum lycopersicum HOM05D006155 ORTHO05D007529 1.0e-67 260.8 214 59.3
CDE02G2305 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 1.3e-67 260.4 218 59.6
Lju2262C0T14 Lonicera japonica HOM05D006155 ORTHO05D007529 1.3e-67 260.4 215 58.6
CsaV3_3G011540 Cucumis sativus L. HOM05D006155 ORTHO05D007529 1.7e-67 260.0 220 60.0
Nitab4.5_0003474g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 2.9e-67 259.2 214 58.4
VMungo0720G0761 Vigna mungo HOM05D006155 ORTHO05D007529 2.9e-67 259.2 218 59.6
CSS0040589 Camellia sinensis var. sinensis HOM05D006155 ORTHO05D007529 5.0e-67 258.5 215 59.1
CAN.G812.29 Capsicum annuum HOM05D006155 ORTHO05D007529 5.0e-67 258.5 223 56.1
MELO3C006364.2 Cucumis melo HOM05D006155 ORTHO05D007529 5.0e-67 258.5 220 59.1
FAN22G1742 Fragaria x ananassa HOM05D006155 ORTHO05D007529 5.0e-67 258.5 236 55.5
Pp3c17_6550 Physcomitrium patens HOM05D006155 ORTHO05D007529 6.5e-67 258.1 210 57.6
Rhsim09G0042400 Rhododendron simsii HOM05D006155 ORTHO05D007529 6.5e-67 258.1 218 58.7
Potri.010G063700 Populus trichocarpa HOM05D006155 ORTHO05D007529 8.5e-67 257.7 212 61.3
SGA_v2.0_scaffold285G47059 Striga asiatica HOM05D006155 ORTHO05D007529 8.5e-67 257.7 217 59.4
MSTRG.24647 Avicennia marina HOM05D006155 ORTHO05D007529 1.1e-66 257.3 212 59.4
Nitab4.5_0002937g0030 Nicotiana tabacum HOM05D006155 ORTHO05D007529 1.1e-66 257.3 214 58.4
THA.LOC104816010 Tarenaya hassleriana HOM05D006155 ORTHO05D007529 1.1e-66 257.3 221 58.4
Lj5g0009281 Lotus japonicus HOM05D006155 ORTHO05D007529 1.5e-66 256.9 221 58.8
Medtr1g073140 Medicago truncatula HOM05D006155 ORTHO05D007529 1.9e-66 256.5 212 60.8
DCAR_002295 Daucus carota HOM05D006155 ORTHO05D007529 2.5e-66 256.1 212 58.0
Duzib151G0563 Durio zibethinus HOM05D006155 ORTHO05D007529 2.5e-66 256.1 212 59.9
ClCG05G003860 Citrullus lanatus HOM05D006155 ORTHO05D007529 3.2e-66 255.8 219 58.9
TPR.G18563 Trifolium pratense HOM05D006155 ORTHO05D007529 3.2e-66 255.8 221 58.8
Glyma.20G199100 Glycine max HOM05D006155 ORTHO05D007529 1.2e-65 253.8 218 58.7
PSO063G0276 Papaver somniferum HOM05D006155 ORTHO05D007529 1.2e-65 253.8 215 58.6
Hma1.2p1_0042F.1_g025650 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 2.1e-65 253.1 212 58.5
Peaxi162Scf00125g01318 Petunia axillaris HOM05D006155 ORTHO05D007529 8.0e-65 251.1 217 57.6
FAN17G0987 Fragaria x ananassa HOM05D006155 ORTHO05D007529 1.0e-64 250.8 226 57.5
Duzib212G0768 Durio zibethinus HOM05D006155 ORTHO05D007529 1.8e-64 250.0 220 57.7
Nn3g19816 Nelumbo nucifera HOM05D006155 ORTHO05D007529 1.8e-64 250.0 183 64.5
Glyma.10G191200 Glycine max HOM05D006155 ORTHO05D007529 4.0e-64 248.8 212 59.0
Ca_09794_v3 Cicer arietinum L. HOM05D006155 ORTHO05D007529 1.2e-63 247.3 220 56.4
ECA248G1656 Erigeron canadensis HOM05D006155 ORTHO05D007529 2.0e-63 246.5 180 63.3
HPP92_007421 Vanilla planifolia HOM05D006155 ORTHO05D007529 2.0e-63 246.5 217 57.1
Sed0003799 Sechium edule HOM05D006155 ORTHO05D007529 7.5e-63 244.6 220 55.0
Sed0011773 Sechium edule HOM05D006155 ORTHO05D007529 9.7e-63 244.2 215 57.2
Pp3c2_6750 Physcomitrium patens HOM05D006155 ORTHO05D007529 3.7e-62 242.3 209 52.2
ATR0787G199 Amborella trichopoda HOM05D006155 ORTHO05D007529 6.3e-62 241.5 206 56.8
unitig_899.g15552 Utricularia gibba HOM05D006155 ORTHO05D007529 7.7e-60 234.6 263 49.8
MBI07_g08907_MAGBIO Magnolia biondii HOM05D006155 ORTHO05D007529 4.2e-58 228.8 166 65.1
Cpa.g.sc3.348 Carica papaya HOM05D006155 ORTHO05D007529 1.8e-56 223.4 169 63.3
vmacro00537 Vaccinium macrocarpon HOM05D006155 ORTHO05D007529 1.2e-55 220.7 305 41.3
Sc04g0004680 Simmondsia chinensis HOM05D006155 ORTHO05D007529 9.8e-55 217.6 164 62.8
CDE01G0085 Ceratophyllum demersum HOM05D006155 ORTHO05D007529 1.2e-52 210.7 214 51.9
MCO11G090 Micromonas commoda HOM05D006155 ORTHO05D007529 2.3e-48 196.4 214 50.9
Cre03.g193000 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 1.0e-40 171.0 215 46.5
TAR365G0649 Trochodendron aralioides HOM05D006155 ORTHO05D007529 5.4e-37 158.7 138 55.8
LjContig00022g0011299 Lotus japonicus HOM05D006155 ORTHO05D007529 1.3e-35 154.1 161 54.0
SMO115G0208 Selaginella moellendorffii HOM05D006155 ORTHO05D007529 3.0e-35 152.9 210 42.9
CiPaw.01G175800 Carya illinoinensis HOM05D006155 ORTHO05D007529 1.2e-33 147.5 99 68.7
Psat6g138760 Pisum sativum HOM05D006155 ORTHO05D007529 3.6e-33 146.0 132 59.1
QL06p021877 Quercus lobata HOM05D006155 ORTHO05D007529 3.9e-27 125.9 96 63.5
Zm00001eb191500 Zea mays HOM05D006155 ORTHO05D007529 2.1e-25 120.2 98 58.2
SEGI_12787 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 8.9e-24 114.8 100 55.0
AUR62035887 Chenopodium quinoa HOM05D006155 ORTHO05D007529 7.1e-21 105.1 83 59.0
Hma1.2p1_0042F.1_g025660 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 1.6e-20 104.0 80 61.2
Hma1.2p1_0144F.1_g065125 Hydrangea macrophylla HOM05D006155 ORTHO05D007529 1.6e-20 104.0 80 61.2
Rhsim09G0043000 Rhododendron simsii HOM05D006155 ORTHO05D007529 2.7e-20 103.2 86 58.1
Actinidia37388 Actinidia chinensis HOM05D006155 ORTHO05D007529 5.6e-18 95.5 66 62.1
SEGI_32209 Sequoiadendron giganteum HOM05D006155 ORTHO05D007529 4.7e-17 92.4 78 57.7
Lj5g0004239 Lotus japonicus HOM05D006155 ORTHO05D007529 3.4e-15 86.3 113 46.9
Lj5g0006737 Lotus japonicus HOM05D006155 ORTHO05D007529 3.4e-15 86.3 113 46.9
Rhsim09G0041400 Rhododendron simsii HOM05D000030 ORTHO05D000009 3.4e-15 86.3 79 54.4
Cre01.g025100 Chlamydomonas reinhardtii HOM05D006155 ORTHO05D007529 8.4e-14 81.6 169 34.9
PRCOL_00006483 Prasinoderma coloniale HOM05D005540 ORTHO05D006932 4.6e-12 75.9 183 32.8
SGA_v2.0_scaffold31G12610 Striga asiatica HOM05D006155 ORTHO05D007529 1.0e-11 74.7 198 32.3
Rhsim09G0048000 Rhododendron simsii HOM05D000029 ORTHO05D002162 3.0e-11 73.2 62 58.1
SalBow7G2104 Salvia bowleyana HOM05D000708 ORTHO05D001418 7.6e-07 58.5 51 60.8


User provided reference genes

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