Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 2.0e-75 285.8 160 100.0
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 2.1e-19 99.8 87 59.8
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 2.7e-19 99.4 100 55.0
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 3.5e-19 99.0 113 52.2
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 4.6e-19 98.6 100 56.0
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 4.6e-19 98.6 89 59.6
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 6.0e-19 98.2 86 61.6
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 7.9e-19 97.8 108 51.9
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 1.0e-18 97.4 127 49.6
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 1.0e-18 97.4 88 59.1
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 1.0e-18 97.4 69 71.0
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 1.3e-18 97.1 86 59.3
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 2.3e-18 96.3 100 54.0
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 3.0e-18 95.9 85 58.8
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 3.0e-18 95.9 68 69.1
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 3.0e-18 95.9 118 49.2
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 5.1e-18 95.1 69 69.6
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 5.1e-18 95.1 79 63.3
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 5.1e-18 95.1 92 57.6
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 5.1e-18 95.1 82 65.9
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 6.7e-18 94.7 138 44.2
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 6.7e-18 94.7 100 55.0
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 8.7e-18 94.4 102 55.9
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 8.7e-18 94.4 105 53.3
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 8.7e-18 94.4 120 48.3
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 8.7e-18 94.4 94 57.4
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 1.1e-17 94.0 85 57.6
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 1.1e-17 94.0 133 45.1
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 1.1e-17 94.0 68 70.6
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 1.1e-17 94.0 67 70.1
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 1.1e-17 94.0 79 62.0
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 1.5e-17 93.6 82 61.0
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 1.5e-17 93.6 68 69.1
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 1.5e-17 93.6 80 62.5
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 1.5e-17 93.6 80 62.5
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 1.5e-17 93.6 67 68.7
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 1.5e-17 93.6 67 68.7
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 1.5e-17 93.6 80 62.5
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 1.9e-17 93.2 113 50.4
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 1.9e-17 93.2 100 55.0
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 1.9e-17 93.2 143 43.4
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 1.9e-17 93.2 100 55.0
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 1.9e-17 93.2 92 54.3
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 1.9e-17 93.2 108 51.9
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 2.5e-17 92.8 67 71.6
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 2.5e-17 92.8 115 52.2
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 3.3e-17 92.4 68 66.2
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 3.3e-17 92.4 116 49.1
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 3.3e-17 92.4 106 52.8
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 3.3e-17 92.4 67 70.1
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 3.3e-17 92.4 67 70.1
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 3.3e-17 92.4 67 70.1
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 4.3e-17 92.0 99 56.6
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 4.3e-17 92.0 105 52.4
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 4.3e-17 92.0 68 67.6
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 5.6e-17 91.7 142 45.1
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 5.6e-17 91.7 78 60.3
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 5.6e-17 91.7 78 60.3
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 5.6e-17 91.7 105 52.4
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 5.6e-17 91.7 87 57.5
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 5.6e-17 91.7 121 46.3
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 5.6e-17 91.7 66 69.7
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 5.6e-17 91.7 66 69.7
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 7.4e-17 91.3 119 47.9
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 7.4e-17 91.3 116 50.0
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 7.4e-17 91.3 110 50.9
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 9.6e-17 90.9 85 58.8
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 9.6e-17 90.9 85 58.8
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 9.6e-17 90.9 80 60.0
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 1.3e-16 90.5 127 44.9
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 1.3e-16 90.5 127 44.9
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 1.3e-16 90.5 78 60.3
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 1.3e-16 90.5 141 48.2
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 1.3e-16 90.5 127 44.1
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 1.6e-16 90.1 79 59.5
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 1.6e-16 90.1 87 57.5
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 1.6e-16 90.1 143 45.5
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 1.6e-16 90.1 95 53.7
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 1.6e-16 90.1 79 60.8
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 1.6e-16 90.1 113 49.6
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 2.1e-16 89.7 68 64.7
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 2.1e-16 89.7 116 48.3
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 2.1e-16 89.7 79 60.8
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 2.1e-16 89.7 127 47.2
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 2.1e-16 89.7 85 57.6
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 2.1e-16 89.7 68 66.2
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 2.8e-16 89.4 78 60.3
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 2.8e-16 89.4 136 44.9
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 2.8e-16 89.4 105 51.4
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 2.8e-16 89.4 79 59.5
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 3.7e-16 89.0 132 46.2
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 3.7e-16 89.0 68 64.7
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 4.8e-16 88.6 68 64.7
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 4.8e-16 88.6 68 64.7
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 4.8e-16 88.6 110 50.0
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 6.2e-16 88.2 127 44.1
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 6.2e-16 88.2 142 43.7
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 1.8e-15 86.7 145 41.4
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 1.8e-15 86.7 128 44.5
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 1.8e-15 86.7 128 44.5
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 3.1e-15 85.9 135 44.4
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 3.1e-15 85.9 128 43.8
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 6.9e-15 84.7 143 41.3
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 6.9e-15 84.7 143 41.3
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 9.0e-15 84.3 73 63.0
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 2.0e-14 83.2 63 68.3
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 7.6e-14 81.3 86 52.3
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 2.9e-13 79.3 78 57.7
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 2.9e-13 79.3 115 45.2
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 5.5e-12 75.1 79 54.4
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 2.7e-11 72.8 62 61.3
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 5.1e-10 68.6 57 64.9
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 6.7e-10 68.2 105 47.6
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 8.7e-10 67.8 106 47.2
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 1.9e-09 66.6 59 61.0
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 2.5e-09 66.2 81 45.7
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 1.3e-08 63.9 124 39.5
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 3.1e-07 59.3 84 45.2
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 3.1e-07 59.3 62 50.0
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 4.5e-06 55.5 68 47.1


User provided reference genes

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