Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO164G0186 Selaginella moellendorffii HOM05D007068 ORTHO05D008590 1.1e-181 639.8 323 100.0
SMO164G0105 Selaginella moellendorffii HOM05D020476 ORTHO05D008590 3.5e-167 591.7 317 95.0
Nn3g18277 Nelumbo nucifera HOM05D007068 ORTHO05D008590 2.0e-29 134.0 174 43.7
Dinv17551 Davidia involucrata HOM05D007068 ORTHO05D008590 1.3e-28 131.3 205 39.0
TAR622G0435 Trochodendron aralioides HOM05D007068 ORTHO05D008590 1.3e-28 131.3 170 41.8
Hma1.2p1_0669F.1_g200120 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 3.2e-27 126.7 189 39.7
Pp3c3_22100 Physcomitrium patens HOM05D007068 ORTHO05D008590 7.1e-27 125.6 180 42.8
Pp3c3_22103 Physcomitrium patens HOM05D007068 ORTHO05D008590 7.1e-27 125.6 180 42.8
VMungo0251G0101 Vigna mungo HOM05D007068 ORTHO05D008590 1.2e-26 124.8 164 40.9
SalBow1G5613 Salvia bowleyana HOM05D007068 ORTHO05D008590 2.7e-26 123.6 235 36.2
MBI13_g47078_MAGBIO Magnolia biondii HOM05D007068 ORTHO05D008590 3.5e-26 123.2 160 40.0
Aqoxy3G00060 Aquilegia oxysepala HOM05D007068 ORTHO05D008590 1.0e-25 121.7 182 40.1
A06p04350 Brassica napus HOM05D007068 ORTHO05D008590 1.3e-25 121.3 174 39.1
Cfa019656 Carpinus fangiana HOM05D007068 ORTHO05D008590 1.3e-25 121.3 175 41.7
Phvul.002G330100 Phaseolus vulgaris HOM05D007068 ORTHO05D008590 1.8e-25 120.9 164 38.4
Atru.chr9.1734 Acer truncatum HOM05D007068 ORTHO05D008590 2.3e-25 120.6 235 31.5
Mapoly0060s0110 Marchantia polymorpha HOM05D007068 ORTHO05D008590 2.3e-25 120.6 168 39.9
QL10p029594 Quercus lobata HOM05D007068 ORTHO05D008590 2.3e-25 120.6 166 42.8
GSVIVG01011540001 Vitis vinifera HOM05D007068 ORTHO05D008590 2.3e-25 120.6 168 41.1
Ca_17189_v3 Cicer arietinum L. HOM05D007068 ORTHO05D008590 3.0e-25 120.2 168 39.3
FvH4_5g17330 Fragaria vesca HOM05D007068 ORTHO05D008590 3.0e-25 120.2 166 42.2
FAN18G2889 Fragaria x ananassa HOM05D007068 ORTHO05D008590 3.0e-25 120.2 166 42.2
Sp1g35530 Schrenkiella parvula HOM05D007068 ORTHO05D008590 3.0e-25 120.2 174 40.2
Duzib084G0836 Durio zibethinus HOM05D007068 ORTHO05D008590 5.1e-25 119.4 231 35.9
Oeu031766.1 Olea europaea HOM05D007068 ORTHO05D008590 8.7e-25 118.6 253 31.6
Psat7g003560 Pisum sativum HOM05D007068 ORTHO05D008590 8.7e-25 118.6 167 40.1
RcHm_v2.0_Chr7g0178441 Rosa chinensis HOM05D007068 ORTHO05D008590 1.1e-24 118.2 170 39.4
arahy.Tifrunner.gnm1.ann1.N01HH5 Arachis hypogaea HOM05D007068 ORTHO05D008590 1.5e-24 117.9 169 40.8
BcaB07g33743 Brassica carinata HOM05D007068 ORTHO05D008590 1.5e-24 117.9 174 38.5
FAN13G0457 Fragaria x ananassa HOM05D007068 ORTHO05D008590 1.9e-24 117.5 168 42.3
Thhalv10011472m.g Eutrema salsugineum HOM05D007068 ORTHO05D008590 3.3e-24 116.7 217 34.6
Solyc03g118700.3 Solanum lycopersicum HOM05D007068 ORTHO05D008590 3.3e-24 116.7 211 36.5
CiPaw.16G093400 Carya illinoinensis HOM05D007068 ORTHO05D008590 4.3e-24 116.3 175 41.7
DCAR_014504 Daucus carota HOM05D007068 ORTHO05D008590 4.3e-24 116.3 173 38.7
Lalb_Chr16g0386991 Lupinus albus HOM05D007068 ORTHO05D008590 4.3e-24 116.3 174 42.5
Aa31LG10G5220 Aethionema arabicum HOM05D007068 ORTHO05D008590 5.6e-24 115.9 174 37.9
Migut.D01541 Erythranthe guttata HOM05D007068 ORTHO05D008590 5.6e-24 115.9 190 36.8
Thecc.03G056900 Theobroma cacao HOM05D007068 ORTHO05D008590 5.6e-24 115.9 175 38.9
AL1G55220 Arabidopsis lyrata HOM05D007068 ORTHO05D008590 7.4e-24 115.5 174 39.1
BcaC08g43059 Brassica carinata HOM05D007068 ORTHO05D008590 1.3e-23 114.8 174 37.9
BolC6t35436H Brassica oleracea HOM05D007068 ORTHO05D008590 1.3e-23 114.8 174 37.9
COL.COLO4_04377 Corchorus olitorius HOM05D007068 ORTHO05D008590 1.3e-23 114.8 240 35.8
Haze_18849 Corylus avellana HOM05D007068 ORTHO05D008590 1.3e-23 114.8 178 39.9
Prupe.5G233500 Prunus persica HOM05D007068 ORTHO05D008590 1.3e-23 114.8 175 40.6
PGSC0003DMG400005672 Solanum tuberosum HOM05D007068 ORTHO05D008590 2.1e-23 114.0 213 36.2
Lj4g0019727 Lotus japonicus HOM05D007068 ORTHO05D008590 2.8e-23 113.6 199 38.2
AT1G48580 Arabidopsis thaliana HOM05D007068 ORTHO05D008590 4.8e-23 112.8 214 35.5
Eucgr.K02273 Eucalyptus grandis HOM05D007068 ORTHO05D008590 4.8e-23 112.8 180 33.9
Potri.012G047000 Populus trichocarpa HOM05D007068 ORTHO05D008590 6.2e-23 112.5 174 37.4
arahy.Tifrunner.gnm1.ann1.ZH8P6D Arachis hypogaea HOM05D007068 ORTHO05D008590 8.2e-23 112.1 170 40.0
CANSAT80G0386 Cannabis sativa HOM05D007068 ORTHO05D008590 1.1e-22 111.7 186 35.5
Cpa.g.sc3.397 Carica papaya HOM05D007068 ORTHO05D008590 1.1e-22 111.7 159 38.4
Gohir.A07G061700 Gossypium hirsutum HOM05D007068 ORTHO05D008590 1.1e-22 111.7 172 39.5
C06p03180 Brassica napus HOM05D007068 ORTHO05D008590 1.4e-22 111.3 205 35.1
Glyma.08G054400 Glycine max HOM05D007068 ORTHO05D008590 1.4e-22 111.3 163 38.7
CARHR038180 Cardamine hirsuta HOM05D007068 ORTHO05D008590 2.4e-22 110.5 175 36.6
HPP92_002012 Vanilla planifolia HOM05D007068 ORTHO05D008590 2.4e-22 110.5 171 39.2
Carub.0001s3769 Capsella rubella HOM05D007068 ORTHO05D008590 3.1e-22 110.2 174 38.5
BraA06t23639Z Brassica rapa HOM05D007068 ORTHO05D008590 4.0e-22 109.8 200 36.5
ECA238G2622 Erigeron canadensis HOM05D007068 ORTHO05D008590 4.0e-22 109.8 199 34.2
SGA_v2.0_scaffold36G14383 Striga asiatica HOM05D007068 ORTHO05D008590 4.0e-22 109.8 124 45.2
CSS0009831 Camellia sinensis var. sinensis HOM05D007068 ORTHO05D008590 5.3e-22 109.4 170 38.8
CAN.G843.56 Capsicum annuum HOM05D007068 ORTHO05D008590 5.3e-22 109.4 178 38.2
Medtr8g107330 Medicago truncatula HOM05D007068 ORTHO05D008590 5.3e-22 109.4 167 39.5
Actinidia39838 Actinidia chinensis HOM05D007068 ORTHO05D008590 9.0e-22 108.6 167 39.5
SEGI_36605 Sequoiadendron giganteum HOM05D007068 ORTHO05D008590 9.0e-22 108.6 102 52.9
FAN04G2769 Fragaria x ananassa HOM05D007068 ORTHO05D008590 1.2e-21 108.2 162 38.9
Lsat_1_v5_gn_2_14700 Lactuca sativa HOM05D007068 ORTHO05D008590 1.5e-21 107.8 209 33.5
Rhsim08G0124500 Rhododendron simsii HOM05D007068 ORTHO05D008590 1.5e-21 107.8 193 35.2
Sabra12G0033000 Salix brachista HOM05D007068 ORTHO05D008590 1.5e-21 107.8 208 34.1
CsaV3_1G004370 Cucumis sativus L. HOM05D007068 ORTHO05D008590 2.6e-21 107.1 173 37.0
Sed0003101 Sechium edule HOM05D007068 ORTHO05D008590 7.6e-21 105.5 196 34.7
TPR.G1401 Trifolium pratense HOM05D007068 ORTHO05D008590 7.6e-21 105.5 184 37.5
MELO3C017359.2 Cucumis melo HOM05D007068 ORTHO05D008590 1.7e-20 104.4 173 36.4
Gohir.D07G066400 Gossypium hirsutum HOM05D007068 ORTHO05D008590 1.7e-20 104.4 174 37.9
ATR0618G302 Amborella trichopoda HOM05D007068 ORTHO05D008590 2.9e-20 103.6 130 43.8
PSO478G2297 Papaver somniferum HOM05D007068 ORTHO05D008590 2.9e-20 103.6 169 36.1
Nitab4.5_0004556g0050 Nicotiana tabacum HOM05D007068 ORTHO05D008590 3.8e-20 103.2 178 34.8
Nitab4.5_0003401g0040 Nicotiana tabacum HOM05D007068 ORTHO05D008590 6.5e-20 102.4 178 35.4
PSO017G3869 Papaver somniferum HOM05D007068 ORTHO05D008590 8.4e-20 102.1 169 34.9
Gorai.001G070000 Gossypium raimondii HOM05D007068 ORTHO05D008590 1.4e-19 101.3 176 36.9
CDE02G3810 Ceratophyllum demersum HOM05D007068 ORTHO05D008590 1.9e-19 100.9 202 33.7
Ciclev10008793m.g Citrus clementina HOM05D007068 ORTHO05D008590 2.1e-18 97.4 85 54.1
Zm00001eb304630 Zea mays HOM05D007068 ORTHO05D008590 2.7e-18 97.1 230 32.6
AUR62037972 Chenopodium quinoa HOM05D007068 ORTHO05D008590 4.6e-18 96.3 135 38.5
Peaxi162Scf00683g00453 Petunia axillaris HOM05D007068 ORTHO05D008590 4.6e-18 96.3 244 29.1
EL10Ac4g08480 Beta vulgaris HOM05D007068 ORTHO05D008590 7.9e-18 95.5 141 36.9
MD06G1227000 Malus domestica HOM05D007068 ORTHO05D008590 6.7e-17 92.4 191 34.0
Cc04_g06260 Coffea canephora HOM05D007068 ORTHO05D008590 1.1e-16 91.7 176 35.2
HanXRQChr14g0431751 Helianthus annuus HOM05D007068 ORTHO05D008590 4.3e-16 89.7 79 53.2
ClCG06G014310 Citrullus lanatus HOM05D007068 ORTHO05D008590 7.4e-16 89.0 169 33.1
Hma1.2p1_0669F.1_g200130 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 2.8e-15 87.0 155 35.5
AagrBONN_evm.TU.Sc2ySwM_362.2609 Anthoceros agrestis HOM05D007068 ORTHO05D008590 1.8e-14 84.3 142 33.8
VMungo0251G0567 Vigna mungo HOM05D007068 ORTHO05D008590 1.8e-14 84.3 189 30.2
Hund10357 Selenicereus undatus HOM05D007068 ORTHO05D008590 1.0e-12 78.6 170 34.7
Ah.06g187490 Amaranthus hybridus HOM05D007068 ORTHO05D008590 1.3e-12 78.2 207 28.0
Peaxi162Scf00683g00454 Petunia axillaris HOM05D007068 ORTHO05D008590 3.8e-12 76.6 147 32.7
vmacro17572 Vaccinium macrocarpon HOM05D007068 ORTHO05D008590 5.0e-12 76.3 83 44.6
CBR_g21755 Chara braunii HOM05D007068 ORTHO05D008590 6.5e-12 75.9 124 37.9
Sc10g0009180 Simmondsia chinensis HOM05D007068 ORTHO05D008590 2.5e-11 73.9 169 30.8
Manes.14G171300 Manihot esculenta HOM05D007068 ORTHO05D008590 7.2e-11 72.4 63 55.6
Cre03.g201700 Chlamydomonas reinhardtii HOM05D007068 ORTHO05D008590 9.4e-11 72.0 130 35.4
FAN08G2700 Fragaria x ananassa HOM05D007068 ORTHO05D008590 9.7e-08 62.0 69 46.4
arahy.Tifrunner.gnm1.ann1.USF1F6 Arachis hypogaea HOM05D007068 ORTHO05D008590 9.1e-06 55.5 56 44.6


User provided reference genes

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