Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO164G0111 Selaginella moellendorffii HOM05D005624 ORTHO05D006896 2.6e-115 418.7 204 100.0
CiPaw.05G096300 Carya illinoinensis HOM05D005624 ORTHO05D006896 3.4e-67 258.8 205 60.0
Manes.08G097600 Manihot esculenta HOM05D005624 ORTHO05D006896 7.6e-67 257.7 205 60.5
MSTRG.8074 Avicennia marina HOM05D005624 ORTHO05D006896 1.7e-66 256.5 200 61.0
Prupe.1G209600 Prunus persica HOM05D005624 ORTHO05D006896 1.7e-66 256.5 200 60.0
GSVIVG01001144001 Vitis vinifera HOM05D005624 ORTHO05D006896 2.2e-66 256.1 204 58.8
Zm00001eb318180 Zea mays HOM05D005624 ORTHO05D006896 2.2e-66 256.1 204 58.8
Actinidia33983 Actinidia chinensis HOM05D005624 ORTHO05D006896 2.9e-66 255.8 205 57.1
HPP92_013550 Vanilla planifolia HOM05D005624 ORTHO05D006896 4.9e-66 255.0 198 61.1
CSS0016097 Camellia sinensis var. sinensis HOM05D005624 ORTHO05D006896 6.4e-66 254.6 205 58.0
PGR119G0553 Punica granatum HOM05D005624 ORTHO05D006896 6.4e-66 254.6 198 60.1
AUR62033199 Chenopodium quinoa HOM05D005624 ORTHO05D006896 1.1e-65 253.8 198 60.6
TAR622G0071 Trochodendron aralioides HOM05D005624 ORTHO05D006896 1.4e-65 253.4 208 57.2
TWI75G1298 Tripterygium wilfordii HOM05D005624 ORTHO05D006896 1.9e-65 253.1 201 61.7
MD13G1135700 Malus domestica HOM05D005624 ORTHO05D006896 2.4e-65 252.7 200 58.5
Duzib128G1380 Durio zibethinus HOM05D005624 ORTHO05D006896 3.2e-65 252.3 202 58.4
CANSAT25G1757 Cannabis sativa HOM05D005624 ORTHO05D006896 7.1e-65 251.1 202 57.9
Cc11_g14800 Coffea canephora HOM05D005624 ORTHO05D006896 7.1e-65 251.1 197 59.4
FvH4_4g21930 Fragaria vesca HOM05D005624 ORTHO05D006896 7.1e-65 251.1 198 58.6
SalBow2G1530 Salvia bowleyana HOM05D005624 ORTHO05D006896 7.1e-65 251.1 194 58.2
PGSC0003DMG400029983 Solanum tuberosum HOM05D005624 ORTHO05D006896 7.1e-65 251.1 196 60.7
Cfa020947 Carpinus fangiana HOM05D005624 ORTHO05D006896 9.3e-65 250.8 198 59.6
Haze_19383 Corylus avellana HOM05D005624 ORTHO05D006896 9.3e-65 250.8 198 59.6
Migut.L00899 Erythranthe guttata HOM05D005624 ORTHO05D006896 9.3e-65 250.8 200 58.0
Peaxi162Scf00334g00119 Petunia axillaris HOM05D005624 ORTHO05D006896 9.3e-65 250.8 196 60.2
Zm00001eb102600 Zea mays HOM05D005624 ORTHO05D006896 9.3e-65 250.8 204 57.8
PSO478G3843 Papaver somniferum HOM05D005624 ORTHO05D006896 1.2e-64 250.4 204 57.4
AUR62008562 Chenopodium quinoa HOM05D005624 ORTHO05D006896 1.6e-64 250.0 198 60.1
Thhalv10014678m.g Eutrema salsugineum HOM05D005624 ORTHO05D006896 1.6e-64 250.0 204 58.8
Nitab4.5_0001089g0030 Nicotiana tabacum HOM05D005624 ORTHO05D006896 2.1e-64 249.6 196 59.7
Pp3c7_9270 Physcomitrium patens HOM05D005624 ORTHO05D006896 2.1e-64 249.6 208 57.2
CAN.G39.18 Capsicum annuum HOM05D005624 ORTHO05D006896 2.7e-64 249.2 196 60.2
Oeu032685.1 Olea europaea HOM05D005624 ORTHO05D006896 2.7e-64 249.2 197 59.4
Sopen02g002020 Solanum pennellii HOM05D005624 ORTHO05D006896 2.7e-64 249.2 196 60.7
MD16G1131300 Malus domestica HOM05D005624 ORTHO05D006896 3.5e-64 248.8 205 57.6
Nitab4.5_0011777g0020 Nicotiana tabacum HOM05D005624 ORTHO05D006896 3.5e-64 248.8 196 59.7
Hma1.2p1_0562F.1_g179050 Hydrangea macrophylla HOM05D005624 ORTHO05D006896 4.6e-64 248.4 207 58.5
Lj3A918T40 Lonicera japonica HOM05D005624 ORTHO05D006896 4.6e-64 248.4 204 57.4
Potri.003G158200 Populus trichocarpa HOM05D005624 ORTHO05D006896 4.6e-64 248.4 196 61.2
COL.COLO4_32213 Corchorus olitorius HOM05D005624 ORTHO05D006896 6.0e-64 248.1 198 58.6
ATR0582G264 Amborella trichopoda HOM05D005624 ORTHO05D006896 7.9e-64 247.7 209 55.0
Aqoxy3G01649 Aquilegia oxysepala HOM05D005624 ORTHO05D006896 7.9e-64 247.7 204 57.4
FAN17G0486 Fragaria x ananassa HOM05D005624 ORTHO05D006896 7.9e-64 247.7 198 58.1
Sc17g0003450 Simmondsia chinensis HOM05D005624 ORTHO05D006896 7.9e-64 247.7 206 58.7
BcaB01g05468 Brassica carinata HOM05D005624 ORTHO05D006896 1.0e-63 247.3 199 59.3
C03p05810 Brassica napus HOM05D000602 ORTHO05D006896 1.0e-63 247.3 201 58.2
BolC3t13101H Brassica oleracea HOM05D005624 ORTHO05D006896 1.0e-63 247.3 201 58.2
Mapoly0097s0090 Marchantia polymorpha HOM05D005624 ORTHO05D006896 1.3e-63 246.9 193 61.1
RcHm_v2.0_Chr4g0428141 Rosa chinensis HOM05D005624 ORTHO05D006896 1.3e-63 246.9 205 56.6
Ah.03g134040 Amaranthus hybridus HOM05D005624 ORTHO05D006896 1.7e-63 246.5 198 59.1
AL6G22400 Arabidopsis lyrata HOM05D005624 ORTHO05D006896 1.7e-63 246.5 203 58.6
BraA03t09846Z Brassica rapa HOM05D005624 ORTHO05D006896 1.7e-63 246.5 203 58.6
CARHR201540 Cardamine hirsuta HOM05D005624 ORTHO05D006896 1.7e-63 246.5 203 58.1
ClCG10G013180 Citrullus lanatus HOM05D005624 ORTHO05D006896 1.7e-63 246.5 196 58.2
QL03p047013 Quercus lobata HOM05D005624 ORTHO05D006896 1.7e-63 246.5 205 57.1
Rhsim12G0090500 Rhododendron simsii HOM05D005624 ORTHO05D006896 1.7e-63 246.5 198 57.1
THA.LOC104811263 Tarenaya hassleriana HOM05D005624 ORTHO05D006896 2.3e-63 246.1 200 59.0
unitig_22.g6367 Utricularia gibba HOM05D005624 ORTHO05D006896 2.3e-63 246.1 198 57.1
Hund05398 Selenicereus undatus HOM05D005624 ORTHO05D006896 3.0e-63 245.7 198 58.1
arahy.Tifrunner.gnm1.ann1.CA7SJ1 Arachis hypogaea HOM05D005624 ORTHO05D006896 3.9e-63 245.4 199 57.3
arahy.Tifrunner.gnm1.ann1.YB0CZG Arachis hypogaea HOM05D005624 ORTHO05D006896 3.9e-63 245.4 199 57.3
BolC2t06481H Brassica oleracea HOM05D005624 ORTHO05D006896 3.9e-63 245.4 202 57.9
Sp6g31930 Schrenkiella parvula HOM05D005624 ORTHO05D006896 3.9e-63 245.4 202 58.9
AT5G11680 Arabidopsis thaliana HOM05D005624 ORTHO05D006896 5.1e-63 245.0 203 58.1
PSO017G6046 Papaver somniferum HOM05D005624 ORTHO05D006896 5.1e-63 245.0 204 56.4
Thecc.05G235200 Theobroma cacao HOM05D005624 ORTHO05D006896 5.1e-63 245.0 202 56.9
DCAR_028131 Daucus carota HOM05D005624 ORTHO05D006896 8.7e-63 244.2 205 54.1
Gohir.A08G221500 Gossypium hirsutum HOM05D005624 ORTHO05D006896 8.7e-63 244.2 202 56.9
Gohir.D08G238100 Gossypium hirsutum HOM05D005624 ORTHO05D006896 8.7e-63 244.2 202 56.9
Atru.chr12.1491 Acer truncatum HOM05D005624 ORTHO05D006896 1.1e-62 243.8 205 58.5
BcaC03g13386 Brassica carinata HOM05D005624 ORTHO05D006896 1.1e-62 243.8 205 57.6
Gorai.004G253600 Gossypium raimondii HOM05D005624 ORTHO05D006896 1.1e-62 243.8 202 56.4
Carub.0006s1018 Capsella rubella HOM05D005624 ORTHO05D006896 1.5e-62 243.4 202 58.9
Solyc02g005603.1 Solanum lycopersicum HOM05D005624 ORTHO05D006896 1.9e-62 243.0 196 59.7
Peaxi162Scf00681g00118 Petunia axillaris HOM05D005624 ORTHO05D006896 2.5e-62 242.7 196 59.2
Sabra01G0051200 Salix brachista HOM05D005624 ORTHO05D006896 2.5e-62 242.7 196 59.7
Eucgr.J01702 Eucalyptus grandis HOM05D005624 ORTHO05D006896 3.3e-62 242.3 205 55.6
Glyma.08G266400 Glycine max HOM05D005624 ORTHO05D006896 4.3e-62 241.9 198 59.6
Aa31LG3G15530 Aethionema arabicum HOM05D000602 ORTHO05D001147 9.6e-62 240.7 208 56.2
EL10Ac7g17520 Beta vulgaris HOM05D005624 ORTHO05D006896 9.6e-62 240.7 198 58.6
Potri.001G072600 Populus trichocarpa HOM05D005624 ORTHO05D006896 9.6e-62 240.7 196 58.7
Lsat_1_v5_gn_1_78160 Lactuca sativa HOM05D005624 ORTHO05D006896 1.3e-61 240.4 202 55.9
Sed0005404 Sechium edule HOM05D005624 ORTHO05D006896 1.3e-61 240.4 196 58.2
CsaV3_3G043430 Cucumis sativus L. HOM05D005624 ORTHO05D006896 1.6e-61 240.0 196 57.1
HanXRQChr10g0312121 Helianthus annuus HOM05D005624 ORTHO05D006896 2.1e-61 239.6 202 55.9
Sed0018373 Sechium edule HOM05D005624 ORTHO05D006896 2.1e-61 239.6 204 56.9
Ciclev10005917m.g Citrus clementina HOM05D005624 ORTHO05D006896 2.8e-61 239.2 202 56.9
AagrBONN_evm.TU.Sc2ySwM_117.3158 Anthoceros agrestis HOM05D005624 ORTHO05D006896 3.6e-61 238.8 201 59.2
TWI18G0768 Tripterygium wilfordii HOM05D005624 ORTHO05D006896 3.6e-61 238.8 200 56.0
VMungo0251G1277 Vigna mungo HOM05D005624 ORTHO05D006896 4.8e-61 238.4 198 58.6
Lj4g0021292 Lotus japonicus HOM05D005624 ORTHO05D006896 1.1e-60 237.3 200 57.5
Psat4g111480 Pisum sativum HOM05D005624 ORTHO05D006896 1.1e-60 237.3 203 56.2
CiPaw.06G112400 Carya illinoinensis HOM05D005624 ORTHO05D006896 1.4e-60 236.9 210 56.7
Glyma.16G101200 Glycine max HOM05D005624 ORTHO05D006896 1.4e-60 236.9 198 58.1
Solyc04g009190.3 Solanum lycopersicum HOM05D005624 ORTHO05D006896 1.4e-60 236.9 196 57.1
Sopen04g004320 Solanum pennellii HOM05D005624 ORTHO05D006896 2.4e-60 236.1 196 57.1
PGSC0003DMG402032565 Solanum tuberosum HOM05D005624 ORTHO05D006896 2.4e-60 236.1 196 57.1
Phvul.003G274200 Phaseolus vulgaris HOM05D005624 ORTHO05D006896 3.1e-60 235.7 201 57.2
TPR.G6115 Trifolium pratense HOM05D005624 ORTHO05D006896 3.1e-60 235.7 202 56.9
unitig_8.g3112 Utricularia gibba HOM05D005624 ORTHO05D006896 3.1e-60 235.7 224 50.0
ECA236G4393 Erigeron canadensis HOM05D000127 ORTHO05D000243 7.6e-59 231.1 194 54.6
Medtr8g070860 Medicago truncatula HOM05D005624 ORTHO05D006896 9.9e-59 230.7 198 56.6
A03p05080 Brassica napus HOM05D000602 ORTHO05D006896 6.2e-53 211.5 183 55.7
Lsat_1_v5_gn_5_173840 Lactuca sativa HOM05D005624 ORTHO05D006896 1.4e-52 210.3 181 51.4
Zm00001eb071390 Zea mays HOM05D005624 ORTHO05D006896 1.4e-52 210.3 166 59.6
Nitab4.5_0000069g0230 Nicotiana tabacum HOM05D005624 ORTHO05D006896 3.1e-52 209.1 196 53.1
MELO3C026760.2 Cucumis melo HOM05D005624 ORTHO05D006896 6.9e-52 208.0 169 56.2
Nitab4.5_0004301g0080 Nicotiana tabacum HOM05D005624 ORTHO05D006896 9.0e-52 207.6 196 53.1
Peaxi162Scf00021g02113 Petunia axillaris HOM05D005624 ORTHO05D006896 2.6e-51 206.1 196 50.0
HanXRQChr01g0012261 Helianthus annuus HOM05D005624 ORTHO05D006896 2.1e-48 196.4 184 47.8
vmacro16032 Vaccinium macrocarpon HOM05D005624 ORTHO05D006896 2.1e-48 196.4 172 54.1
Duzib177G0503 Durio zibethinus HOM05D005624 ORTHO05D006896 7.9e-48 194.5 202 49.5
Solyc01g008220.3 Solanum lycopersicum HOM05D005624 ORTHO05D006896 3.3e-46 189.1 194 48.5
MBI11_g04265_MAGBIO Magnolia biondii HOM05D005624 ORTHO05D006896 1.7e-42 176.8 160 52.5
Dinv02966 Davidia involucrata HOM05D005624 ORTHO05D006896 2.7e-40 169.5 150 54.7
Lalb_Chr05g0228971 Lupinus albus HOM05D005624 ORTHO05D006896 2.3e-39 166.4 125 59.2
CAN.G619.7 Capsicum annuum HOM05D005624 ORTHO05D006896 6.7e-39 164.9 141 56.0
CBR_g24147 Chara braunii HOM05D005624 ORTHO05D006896 1.6e-37 160.2 153 56.2
Gohir.A13G159151 Gossypium hirsutum HOM05D005624 ORTHO05D006896 1.5e-35 153.7 136 55.1
PGSC0003DMG400016363 Solanum tuberosum HOM05D005624 ORTHO05D006896 4.5e-35 152.1 150 51.3
Gorai.013G198700 Gossypium raimondii HOM05D005624 ORTHO05D006896 7.7e-35 151.4 141 51.8
Migut.L00595 Erythranthe guttata HOM05D005624 ORTHO05D006896 3.8e-34 149.1 96 65.6
MBI07_g41258_MAGBIO Magnolia biondii HOM05D005624 ORTHO05D006896 7.2e-33 144.8 134 51.5
Zm00001eb052330 Zea mays HOM05D005624 ORTHO05D006896 6.1e-32 141.7 119 54.6
Zm00001eb036000 Zea mays HOM05D005624 ORTHO05D006896 1.0e-31 141.0 119 54.6
Cre03.g189100 Chlamydomonas reinhardtii HOM05D005624 ORTHO05D006896 1.8e-28 130.2 184 38.6
CAN.G282.51 Capsicum annuum HOM05D005624 ORTHO05D006896 6.3e-21 105.1 194 35.1
SEGI_14660 Sequoiadendron giganteum HOM05D005624 ORTHO05D006896 2.4e-20 103.2 61 73.8
C02p05330 Brassica napus HOM05D005624 ORTHO05D006896 2.0e-19 100.1 95 52.6
Cc08_g00010 Coffea canephora HOM05D005624 ORTHO05D006896 5.0e-18 95.5 75 58.7
Cc10_g16310 Coffea canephora HOM05D005624 ORTHO05D006896 1.5e-17 94.0 75 57.3
CSS0031660 Camellia sinensis var. sinensis HOM05D005624 ORTHO05D006896 2.2e-13 80.1 100 40.0
Cc06_g22650 Coffea canephora HOM05D005624 ORTHO05D006896 2.2e-13 80.1 75 53.3
Dinv02968 Davidia involucrata HOM05D005624 ORTHO05D006896 7.2e-09 65.1 42 64.3


User provided reference genes

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