Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO164G0085 Selaginella moellendorffii HOM05D005481 ORTHO05D006779 2.6e-199 698.7 407 100.0
SMO271G0121 Selaginella moellendorffii HOM05D005481 ORTHO05D006779 1.2e-143 513.8 304 93.4
PSO063G6983 Papaver somniferum HOM05D005481 ORTHO05D006779 1.2e-90 337.8 408 54.2
Hma1.2p1_0095F.1_g047500 Hydrangea macrophylla HOM05D005481 ORTHO05D006779 7.5e-90 335.1 408 54.2
Sed0010601 Sechium edule HOM05D005481 ORTHO05D006779 7.5e-90 335.1 438 52.7
PSO782G1235 Papaver somniferum HOM05D005481 ORTHO05D006779 1.8e-88 330.5 409 52.3
COL.COLO4_27578 Corchorus olitorius HOM05D005481 ORTHO05D006779 3.1e-88 329.7 404 53.5
Mapoly0096s0003 Marchantia polymorpha HOM05D005481 ORTHO05D006779 7.0e-88 328.6 406 53.0
Mapoly0096s0004 Marchantia polymorpha HOM05D005481 ORTHO05D006779 7.0e-88 328.6 406 53.0
CSS0010274 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 2.0e-87 327.0 457 49.9
Gohir.A12G153800 Gossypium hirsutum HOM05D005481 ORTHO05D006779 2.7e-87 326.6 405 52.6
Actinidia20106 Actinidia chinensis HOM05D005481 ORTHO05D006779 2.9e-86 323.2 490 46.5
CSS0011982 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 3.8e-86 322.8 484 48.3
Actinidia37496 Actinidia chinensis HOM05D005481 ORTHO05D006779 5.0e-86 322.4 484 45.0
Eucgr.G02069 Eucalyptus grandis HOM05D005481 ORTHO05D006779 2.5e-85 320.1 423 49.4
Gohir.D12G156900 Gossypium hirsutum HOM05D005481 ORTHO05D006779 2.5e-85 320.1 405 52.3
ATR0598G125 Amborella trichopoda HOM05D005481 ORTHO05D006779 3.2e-85 319.7 405 50.9
Potri.008G139900 Populus trichocarpa HOM05D005481 ORTHO05D006779 5.5e-85 318.9 415 49.2
Cc11_g05700 Coffea canephora HOM05D005481 ORTHO05D006779 7.2e-85 318.5 436 49.3
FAN07G1071 Fragaria x ananassa HOM05D005481 ORTHO05D006779 9.4e-85 318.2 411 51.1
RcHm_v2.0_Chr4g0433701 Rosa chinensis HOM05D005481 ORTHO05D006779 2.1e-84 317.0 455 49.2
MELO3C020059.2 Cucumis melo HOM05D005481 ORTHO05D006779 2.7e-84 316.6 444 52.0
Migut.E00569 Erythranthe guttata HOM05D005481 ORTHO05D006779 2.7e-84 316.6 407 52.6
Prupe.1G338200 Prunus persica HOM05D005481 ORTHO05D006779 2.7e-84 316.6 465 49.9
SalBow2G3020 Salvia bowleyana HOM05D005481 ORTHO05D006779 3.6e-84 316.2 467 50.1
TWI77G0967 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 3.6e-84 316.2 413 53.0
Manes.15G138800 Manihot esculenta HOM05D005481 ORTHO05D006779 4.7e-84 315.8 419 50.1
Dinv20536 Davidia involucrata HOM05D005481 ORTHO05D006779 6.1e-84 315.5 452 53.5
Pp3c12_24640 Physcomitrium patens HOM05D005481 ORTHO05D006779 6.1e-84 315.5 404 53.7
Aqoxy3G04008 Aquilegia oxysepala HOM05D005481 ORTHO05D006779 1.8e-83 313.9 483 48.2
Lj4g0017847 Lotus japonicus HOM05D005481 ORTHO05D006779 1.8e-83 313.9 471 49.0
Sp5g23100 Schrenkiella parvula HOM05D005481 ORTHO05D006779 2.3e-83 313.5 407 51.8
CsaV3_5G012960 Cucumis sativus L. HOM05D005481 ORTHO05D006779 3.0e-83 313.2 445 53.0
Phvul.002G184200 Phaseolus vulgaris HOM05D005481 ORTHO05D006779 5.2e-83 312.4 399 52.4
CiPaw.05G158800 Carya illinoinensis HOM05D005481 ORTHO05D006779 1.2e-82 311.2 418 47.1
MSTRG.13650 Avicennia marina HOM05D005481 ORTHO05D006779 1.5e-82 310.8 426 46.5
BcaC08g45998 Brassica carinata HOM05D005481 ORTHO05D006779 1.5e-82 310.8 405 51.4
Lalb_Chr07g0187931 Lupinus albus HOM05D005481 ORTHO05D006779 1.5e-82 310.8 417 48.9
Gorai.008G169700 Gossypium raimondii HOM05D005481 ORTHO05D006779 2.0e-82 310.5 424 50.2
BcaB03g15132 Brassica carinata HOM05D005481 ORTHO05D006779 4.4e-82 309.3 398 51.5
FAN17G1043 Fragaria x ananassa HOM05D005481 ORTHO05D006779 5.7e-82 308.9 410 52.0
MD13G1015600 Malus domestica HOM05D005481 ORTHO05D006779 7.5e-82 308.5 475 49.9
MD16G1013100 Malus domestica HOM05D005481 ORTHO05D006779 7.5e-82 308.5 471 50.7
C06p37930 Brassica napus HOM05D005481 ORTHO05D006779 9.8e-82 308.1 403 51.4
ClCG11G000990 Citrullus lanatus HOM05D005481 ORTHO05D006779 9.8e-82 308.1 408 50.5
A07p34580 Brassica napus HOM05D005481 ORTHO05D006779 1.3e-81 307.8 401 51.1
A07p32160 Brassica napus HOM05D005481 ORTHO05D006779 1.7e-81 307.4 471 47.8
BraA07t30846Z Brassica rapa HOM05D005481 ORTHO05D006779 1.7e-81 307.4 471 47.8
Os08g0467400 Oryza sativa ssp. japonica HOM05D005481 ORTHO05D006779 1.7e-81 307.4 423 49.2
Cfa022222 Carpinus fangiana HOM05D005481 ORTHO05D006779 2.2e-81 307.0 464 48.1
TPR.G11925 Trifolium pratense HOM05D005481 ORTHO05D006779 2.2e-81 307.0 418 49.8
Carub.0002s1458 Capsella rubella HOM05D005481 ORTHO05D006779 2.8e-81 306.6 397 51.4
Thhalv10018501m.g Eutrema salsugineum HOM05D005481 ORTHO05D006779 3.7e-81 306.2 403 51.6
GSVIVG01011593001 Vitis vinifera HOM05D005481 ORTHO05D006779 3.7e-81 306.2 478 50.8
AT1G68100 Arabidopsis thaliana HOM05D005481 ORTHO05D006779 4.8e-81 305.8 400 51.5
BcaC08g46237 Brassica carinata HOM05D005481 ORTHO05D006779 6.3e-81 305.4 402 51.2
Atru.chr11.1002 Acer truncatum HOM05D005481 ORTHO05D006779 1.1e-80 304.7 475 50.1
C06p41930 Brassica napus HOM05D005481 ORTHO05D006779 1.1e-80 304.7 405 49.9
Glyma.08G092700 Glycine max HOM05D005481 ORTHO05D006779 1.1e-80 304.7 417 48.7
Ca_18192_v3 Cicer arietinum L. HOM05D005481 ORTHO05D006779 1.4e-80 304.3 409 49.6
TWI74G0731 Tripterygium wilfordii HOM05D005481 ORTHO05D006779 1.4e-80 304.3 412 49.8
FvH4_4g26130 Fragaria vesca HOM05D005481 ORTHO05D006779 1.8e-80 303.9 410 50.2
EL10Ac8g18625 Beta vulgaris HOM05D005481 ORTHO05D006779 7.0e-80 302.0 395 52.7
Solyc04g008340.2 Solanum lycopersicum HOM05D005481 ORTHO05D006779 9.1e-80 301.6 473 47.4
Glyma.05G137400 Glycine max HOM05D005481 ORTHO05D006779 1.2e-79 301.2 416 48.8
THA.LOC104821909 Tarenaya hassleriana HOM05D005481 ORTHO05D006779 1.2e-79 301.2 404 50.7
AL2G26810 Arabidopsis lyrata HOM05D005481 ORTHO05D006779 1.6e-79 300.8 455 48.8
CAN.G966.8 Capsicum annuum HOM05D005481 ORTHO05D006779 2.7e-79 300.1 444 50.7
SGA_v2.0_scaffold65G22147 Striga asiatica HOM05D005481 ORTHO05D006779 4.5e-79 299.3 482 47.9
CANSAT78G1557 Cannabis sativa HOM05D005481 ORTHO05D006779 7.7e-79 298.5 479 49.5
BolC6t38892H Brassica oleracea HOM05D005481 ORTHO05D006779 1.5e-77 294.3 405 49.9
FAN22G2365 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.5e-77 294.3 470 46.6
HanXRQChr17g0566271 Helianthus annuus HOM05D005481 ORTHO05D006779 1.5e-77 294.3 394 51.5
TAR622G0189 Trochodendron aralioides HOM05D005481 ORTHO05D006779 1.5e-77 294.3 376 52.7
BraA07t31076Z Brassica rapa HOM05D005481 ORTHO05D006779 2.5e-77 293.5 401 49.9
CDE05G3246 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 3.3e-77 293.1 406 49.5
Sopen04g003490 Solanum pennellii HOM05D005481 ORTHO05D006779 4.2e-77 292.7 481 47.6
unitig_22.g5612 Utricularia gibba HOM05D005481 ORTHO05D006779 7.2e-77 292.0 459 46.0
BolC6t39238H Brassica oleracea HOM05D005481 ORTHO05D006779 6.1e-76 288.9 402 49.8
ECA234G1527 Erigeron canadensis HOM05D005481 ORTHO05D006779 1.0e-75 288.1 380 51.3
arahy.Tifrunner.gnm1.ann1.31BYXQ Arachis hypogaea HOM05D005481 ORTHO05D006779 4.0e-75 286.2 377 49.6
CDE05G2094 Ceratophyllum demersum HOM05D005481 ORTHO05D006779 4.0e-75 286.2 458 43.4
Aa31LG9G8490 Aethionema arabicum HOM05D005481 ORTHO05D006779 2.6e-74 283.5 471 46.5
MBI19_g01916_MAGBIO Magnolia biondii HOM05D005481 ORTHO05D006779 3.4e-74 283.1 429 48.0
Rhsim09G0085400 Rhododendron simsii HOM05D005481 ORTHO05D006779 9.8e-74 281.6 527 40.0
Duzib251G0084 Durio zibethinus HOM05D005481 ORTHO05D006779 1.1e-72 278.1 399 48.1
FAN12G2411 Fragaria x ananassa HOM05D005481 ORTHO05D006779 3.3e-69 266.5 410 47.1
AagrBONN_evm.TU.Sc2ySwM_368.3383 Anthoceros agrestis HOM05D005481 ORTHO05D006779 4.3e-69 266.2 277 63.5
Nitab4.5_0000926g0040 Nicotiana tabacum HOM05D005481 ORTHO05D006779 3.6e-68 263.1 411 47.4
CARHR060770 Cardamine hirsuta HOM05D005481 ORTHO05D006779 4.7e-68 262.7 347 52.7
Sc10g0004950 Simmondsia chinensis HOM05D005481 ORTHO05D006779 3.4e-66 256.5 385 47.5
Sabra08G0106000 Salix brachista HOM05D005481 ORTHO05D006779 1.7e-65 254.2 430 42.1
Lsat_1_v5_gn_4_24241 Lactuca sativa HOM05D005481 ORTHO05D006779 6.4e-65 252.3 402 47.3
AUR62033487 Chenopodium quinoa HOM05D005481 ORTHO05D006779 6.6e-62 242.3 337 49.3
QL03p039175 Quercus lobata HOM05D005481 ORTHO05D006779 1.1e-59 235.0 605 34.9
Duzib268G0472 Durio zibethinus HOM05D005481 ORTHO05D006779 1.4e-59 234.6 358 44.7
Hund03668 Selenicereus undatus HOM05D005481 ORTHO05D006779 3.1e-59 233.4 356 49.4
FAN12G2899 Fragaria x ananassa HOM05D005481 ORTHO05D006779 5.8e-58 229.2 280 49.6
VMungo0251G3144 Vigna mungo HOM05D005481 ORTHO05D000001 1.3e-57 228.0 276 48.9
HPP92_005759 Vanilla planifolia HOM05D005481 ORTHO05D006779 2.4e-56 223.8 365 44.7
Ciclev10018249m.g Citrus clementina HOM05D005481 ORTHO05D006779 2.1e-55 220.7 284 46.8
BcaC08g45996 Brassica carinata HOM05D005481 ORTHO05D006779 4.6e-55 219.5 384 47.9
Thecc.02G303600 Theobroma cacao HOM05D005481 ORTHO05D006779 7.8e-55 218.8 260 51.5
Nitab4.5_0007504g0030 Nicotiana tabacum HOM05D005481 ORTHO05D006779 2.8e-52 210.3 292 47.3
BcaB03g15400 Brassica carinata HOM05D005481 ORTHO05D006779 1.5e-50 204.5 181 59.7
DCAR_002653 Daucus carota HOM05D005481 ORTHO05D006779 1.3e-49 201.4 282 46.8
Peaxi162Scf00337g00010 Petunia axillaris HOM05D005481 ORTHO05D006779 2.9e-49 200.3 282 48.2
BcaB03g15128 Brassica carinata HOM05D005481 ORTHO05D006779 1.2e-47 194.9 379 42.0
Zm00001eb037820 Zea mays HOM05D005481 ORTHO05D006779 1.0e-46 191.8 310 47.4
Psat7g085400 Pisum sativum HOM05D005481 ORTHO05D006779 3.0e-46 190.3 318 45.0
AUR62011097 Chenopodium quinoa HOM05D005481 ORTHO05D006779 1.1e-43 181.8 302 44.0
BcaB03g15126 Brassica carinata HOM05D005481 ORTHO05D006779 3.8e-41 173.3 243 45.3
MCO07G486 Micromonas commoda HOM05D005481 ORTHO05D006779 9.3e-40 168.7 311 37.9
CBR_g56846 Chara braunii HOM05D005481 ORTHO05D006779 5.1e-38 162.9 514 32.5
Haze_10808 Corylus avellana HOM05D005481 ORTHO05D006779 1.5e-34 151.4 598 31.8
Dinv20505 Davidia involucrata HOM05D005481 ORTHO05D006779 3.1e-27 127.1 236 54.2
Oeu062661.1 Olea europaea HOM05D005481 ORTHO05D006779 1.7e-25 121.3 102 61.8
Cpa.g.sc326.1 Carica papaya HOM05D005481 ORTHO05D006779 5.4e-24 116.3 87 71.3
BcaB03g15129 Brassica carinata HOM05D005481 ORTHO05D006779 1.6e-23 114.8 277 39.0
SEGI_33830 Sequoiadendron giganteum HOM05D005481 ORTHO05D006779 2.1e-23 114.4 196 40.3
VMungo0251G2403 Vigna mungo HOM05D005481 ORTHO05D006779 4.8e-20 103.2 103 56.3
CSS0044880 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 1.8e-19 101.3 139 49.6
TAR374G0503 Trochodendron aralioides HOM05D005481 ORTHO05D006779 1.2e-18 98.6 52 84.6
Cpa.g.sc326.2 Carica papaya HOM05D005481 ORTHO05D006779 1.5e-18 98.2 80 62.5
Oeu062663.1 Olea europaea HOM05D005481 ORTHO05D006779 1.6e-12 78.2 95 63.2
Sc10g0005080 Simmondsia chinensis HOM05D005481 ORTHO05D006779 2.1e-12 77.8 52 69.2
BcaB03g15399 Brassica carinata HOM05D005481 ORTHO05D006779 2.8e-12 77.4 90 62.2
TAR374G1742 Trochodendron aralioides HOM05D005481 ORTHO05D006779 1.1e-11 75.5 148 50.0
MCO14G334 Micromonas commoda HOM05D005481 ORTHO05D006779 1.9e-08 64.7 138 34.8
CSS0020286 Camellia sinensis var. sinensis HOM05D005481 ORTHO05D006779 9.3e-08 62.4 96 44.8
FAN12G0241 Fragaria x ananassa HOM05D005481 ORTHO05D006779 1.3e-06 58.5 85 43.5
Ah.09g225960 Amaranthus hybridus HOM05D005481 ORTHO05D006779 2.3e-06 57.8 162 42.0


User provided reference genes

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