Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO164G0067 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 9.6e-104 380.2 194 100.0
SMO364G0672 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 8.8e-73 277.3 231 69.3
AagrBONN_evm.TU.Sc2ySwM_368.2742 Anthoceros agrestis HOM05D004589 ORTHO05D005848 1.2e-21 107.5 230 35.2
Lsat_1_v5_gn_6_115440 Lactuca sativa HOM05D004589 ORTHO05D005848 2.7e-21 106.3 204 34.3
Pp3c22_21520 Physcomitrium patens HOM05D004589 ORTHO05D005848 7.8e-21 104.8 221 34.4
Pp3c19_10170 Physcomitrium patens HOM05D004589 ORTHO05D005848 2.3e-20 103.2 220 35.0
Mapoly0001s0490 Marchantia polymorpha HOM05D004589 ORTHO05D005848 8.6e-20 101.3 242 32.2
HanXRQChr16g0511131 Helianthus annuus HOM05D004589 ORTHO05D005848 4.3e-19 99.0 216 34.7
Zm00001eb078140 Zea mays HOM05D004589 ORTHO05D005848 1.4e-17 94.0 215 34.0
Ciclev10007276m.g Citrus clementina HOM05D004589 ORTHO05D005848 1.8e-17 93.6 231 32.0
ATR0629G049 Amborella trichopoda HOM05D004589 ORTHO05D005848 3.1e-17 92.8 230 30.0
Psat6g028520 Pisum sativum HOM05D004589 ORTHO05D005848 3.1e-17 92.8 230 32.2
Ca_13043_v3 Cicer arietinum L. HOM05D004589 ORTHO05D005848 6.9e-17 91.7 233 32.2
AT5G11040 Arabidopsis thaliana HOM05D004589 ORTHO05D005848 8.9e-17 91.3 226 30.1
ECA246G2532 Erigeron canadensis HOM05D004589 ORTHO05D005848 1.2e-16 90.9 229 32.8
Carub.0006s0955 Capsella rubella HOM05D004589 ORTHO05D005848 1.5e-16 90.5 224 30.8
AL6G21660 Arabidopsis lyrata HOM05D004589 ORTHO05D005848 2.0e-16 90.1 224 30.4
CSS0038938 Camellia sinensis var. sinensis HOM05D004589 ORTHO05D005848 2.0e-16 90.1 236 32.6
Lj8A732G29 Lonicera japonica HOM05D004589 ORTHO05D005848 2.6e-16 89.7 237 32.1
Medtr1g012980 Medicago truncatula HOM05D004589 ORTHO05D005848 2.6e-16 89.7 228 32.0
SMO361G0208 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 2.6e-16 89.7 198 31.8
Hma1.2p1_0167F.1_g073640 Hydrangea macrophylla HOM05D004589 ORTHO05D005848 3.4e-16 89.4 234 33.3
Dinv03411 Davidia involucrata HOM05D004589 ORTHO05D005848 4.4e-16 89.0 235 31.9
Glyma.14G112200 Glycine max HOM05D004589 ORTHO05D005848 4.4e-16 89.0 245 31.0
CARHR202250 Cardamine hirsuta HOM05D004589 ORTHO05D005848 5.8e-16 88.6 224 30.8
Lsat_1_v5_gn_1_43861 Lactuca sativa HOM05D004589 ORTHO05D005848 5.8e-16 88.6 206 33.5
PSO210G3160 Papaver somniferum HOM05D004589 ORTHO05D005848 5.8e-16 88.6 234 31.2
MELO3C016987.2 Cucumis melo HOM05D004589 ORTHO05D005848 7.6e-16 88.2 245 31.0
Aqoxy7G03529 Aquilegia oxysepala HOM05D004589 ORTHO05D005848 9.9e-16 87.8 237 29.5
ClCG05G016580 Citrullus lanatus HOM05D004589 ORTHO05D005848 9.9e-16 87.8 241 31.5
DCAR_021911 Daucus carota HOM05D004589 ORTHO05D005848 1.3e-15 87.4 229 31.0
Thhalv10012483m.g Eutrema salsugineum HOM05D004589 ORTHO05D005848 1.7e-15 87.0 224 31.2
Atru.chr7.2502 Acer truncatum HOM05D004589 ORTHO05D005848 2.2e-15 86.7 231 29.9
BraA10t44722Z Brassica rapa HOM05D004589 ORTHO05D005848 2.2e-15 86.7 224 29.5
Peaxi162Scf00430g00220 Petunia axillaris HOM05D004589 ORTHO05D005848 2.2e-15 86.7 232 32.8
Sed0004204 Sechium edule HOM05D004589 ORTHO05D005848 2.2e-15 86.7 247 30.8
C09p65810 Brassica napus HOM05D004589 ORTHO05D005848 2.9e-15 86.3 224 29.5
BolC9t59402H Brassica oleracea HOM05D004589 ORTHO05D005848 2.9e-15 86.3 224 29.5
Os04g0502200 Oryza sativa ssp. japonica HOM05D004589 ORTHO05D005848 2.9e-15 86.3 230 31.7
RcHm_v2.0_Chr6g0297201 Rosa chinensis HOM05D004589 ORTHO05D005848 2.9e-15 86.3 234 28.6
THA.LOC104799036 Tarenaya hassleriana HOM05D004589 ORTHO05D005848 2.9e-15 86.3 225 31.6
A10p26640 Brassica napus HOM05D004589 ORTHO05D005848 3.8e-15 85.9 224 29.5
Glyma.17G215700 Glycine max HOM05D004589 ORTHO05D005848 3.8e-15 85.9 243 30.9
CsaV3_4G036860 Cucumis sativus L. HOM05D004589 ORTHO05D005848 4.9e-15 85.5 245 30.6
Eucgr.C02726 Eucalyptus grandis HOM05D004589 ORTHO05D005848 4.9e-15 85.5 234 31.6
Sc23g0006530 Simmondsia chinensis HOM05D004589 ORTHO05D005848 4.9e-15 85.5 220 33.2
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 6.4e-15 85.1 215 34.0
Lj5g0022357 Lotus japonicus HOM05D004589 ORTHO05D005848 6.4e-15 85.1 245 31.0
Nitab4.5_0003811g0060 Nicotiana tabacum HOM05D004589 ORTHO05D005848 6.4e-15 85.1 233 31.8
Oeu056766.2 Olea europaea HOM05D004589 ORTHO05D005848 6.4e-15 85.1 234 32.9
TAR383G0245 Trochodendron aralioides HOM05D004589 ORTHO05D005848 6.4e-15 85.1 239 29.3
COL.COLO4_18916 Corchorus olitorius HOM05D004589 ORTHO05D005848 1.1e-14 84.3 240 30.4
Nitab4.5_0002503g0050 Nicotiana tabacum HOM05D004589 ORTHO05D005848 1.1e-14 84.3 233 31.8
Thecc.09G019500 Theobroma cacao HOM05D004589 ORTHO05D005848 1.1e-14 84.3 234 30.8
VMungo0647G1846 Vigna mungo HOM05D004589 ORTHO05D005848 1.1e-14 84.3 245 30.6
Actinidia23085 Actinidia chinensis HOM05D004589 ORTHO05D005848 1.4e-14 84.0 237 32.1
MD15G1131100 Malus domestica HOM05D004589 ORTHO05D005848 1.4e-14 84.0 234 30.8
Potri.006G259500 Populus trichocarpa HOM05D004589 ORTHO05D005848 1.4e-14 84.0 227 31.7
Potri.018G022500 Populus trichocarpa HOM05D004589 ORTHO05D005848 1.4e-14 84.0 227 32.2
Sp6g32450 Schrenkiella parvula HOM05D004589 ORTHO05D005848 1.9e-14 83.6 224 29.0
Manes.03G011700 Manihot esculenta HOM05D004589 ORTHO05D005848 4.2e-14 82.4 233 33.5
Phvul.001G047300 Phaseolus vulgaris HOM05D004589 ORTHO05D005848 4.2e-14 82.4 244 30.3
Prupe.1G486400 Prunus persica HOM05D004589 ORTHO05D005848 4.2e-14 82.4 233 30.9
MSTRG.1735 Avicennia marina HOM05D004589 ORTHO05D005848 5.4e-14 82.0 235 31.5
Manes.16G126200 Manihot esculenta HOM05D004589 ORTHO05D005848 5.4e-14 82.0 234 32.1
SGA_v2.0_scaffold85G26586 Striga asiatica HOM05D004589 ORTHO05D005848 5.4e-14 82.0 231 32.9
CAN.G199.72 Capsicum annuum HOM05D004589 ORTHO05D005848 7.1e-14 81.6 232 31.9
Gohir.A07G030400 Gossypium hirsutum HOM05D004589 ORTHO05D005848 9.3e-14 81.3 243 30.0
Lalb_Chr11g0075481 Lupinus albus HOM05D004589 ORTHO05D005848 9.3e-14 81.3 245 30.6
Aa31LG3G16090 Aethionema arabicum HOM05D004589 ORTHO05D005848 1.2e-13 80.9 224 31.7
FvH4_2g28290 Fragaria vesca HOM05D004589 ORTHO05D005848 1.2e-13 80.9 231 29.0
Nn8g39722 Nelumbo nucifera HOM05D004589 ORTHO05D005848 1.2e-13 80.9 239 29.7
Cfa013100 Carpinus fangiana HOM05D004589 ORTHO05D005848 1.6e-13 80.5 235 31.1
CiPaw.08G008300 Carya illinoinensis HOM05D004589 ORTHO05D005848 1.6e-13 80.5 235 31.5
Solyc06g065840.3 Solanum lycopersicum HOM05D004589 ORTHO05D005848 1.6e-13 80.5 220 31.8
Sopen06g024330 Solanum pennellii HOM05D004589 ORTHO05D005848 1.6e-13 80.5 220 31.8
TWI63G0229 Tripterygium wilfordii HOM05D004589 ORTHO05D005848 1.6e-13 80.5 235 30.6
Haze_21457 Corylus avellana HOM05D004589 ORTHO05D005848 2.1e-13 80.1 235 31.1
FAN15G2875 Fragaria x ananassa HOM05D004589 ORTHO05D005848 2.1e-13 80.1 231 28.6
FAN24G2656 Fragaria x ananassa HOM05D004589 ORTHO05D005848 2.1e-13 80.1 231 29.0
Gorai.010G117200 Gossypium raimondii HOM05D004589 ORTHO05D005848 2.1e-13 80.1 235 30.6
vmacro22576 Vaccinium macrocarpon HOM05D004589 ORTHO05D005848 2.1e-13 80.1 239 31.4
Cc08_g00190 Coffea canephora HOM05D004589 ORTHO05D005848 2.7e-13 79.7 236 29.2
Gohir.D06G102200 Gossypium hirsutum HOM05D004589 ORTHO05D005848 2.7e-13 79.7 235 30.2
SMO364G0797 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 2.7e-13 79.7 69 65.2
Ah.16g104820 Amaranthus hybridus HOM05D004589 ORTHO05D005848 3.5e-13 79.3 242 30.2
Duzib150G1268 Durio zibethinus HOM05D004589 ORTHO05D005848 3.5e-13 79.3 237 29.1
Migut.E01823 Erythranthe guttata HOM05D004589 ORTHO05D005848 3.5e-13 79.3 244 30.7
SMO199G0047 Selaginella moellendorffii HOM05D004589 ORTHO05D005848 3.5e-13 79.3 187 28.9
FAN20G1713 Fragaria x ananassa HOM05D004589 ORTHO05D005848 4.6e-13 79.0 231 28.6
HanXRQChr01g0030641 Helianthus annuus HOM05D004589 ORTHO05D005848 4.6e-13 79.0 202 29.7
Hund04463 Selenicereus undatus HOM05D004589 ORTHO05D005848 4.6e-13 79.0 241 29.5
Gorai.001G035900 Gossypium raimondii HOM05D004589 ORTHO05D005848 6.0e-13 78.6 243 29.2
Nn2g12251 Nelumbo nucifera HOM05D004589 ORTHO05D005848 6.0e-13 78.6 239 27.6
BcaC04g19264 Brassica carinata HOM05D004589 ORTHO05D005848 7.8e-13 78.2 227 29.1
CANSAT11G1771 Cannabis sativa HOM05D004589 ORTHO05D005848 7.8e-13 78.2 236 28.4
Gohir.A06G100000 Gossypium hirsutum HOM05D004589 ORTHO05D005848 7.8e-13 78.2 236 30.9
arahy.Tifrunner.gnm1.ann1.JQP3NY Arachis hypogaea HOM05D004589 ORTHO05D005848 1.0e-12 77.8 234 28.6
arahy.Tifrunner.gnm1.ann1.PKKG09 Arachis hypogaea HOM05D004589 ORTHO05D005848 1.0e-12 77.8 234 28.2
FAN27G1181 Fragaria x ananassa HOM05D004589 ORTHO05D005848 3.9e-12 75.9 231 27.7
CBR_g36903 Chara braunii HOM05D004589 ORTHO05D005848 5.1e-12 75.5 258 27.5
CDE05G2463 Ceratophyllum demersum HOM05D004589 ORTHO05D005848 6.6e-12 75.1 234 30.8
PGR044G0530 Punica granatum HOM05D004589 ORTHO05D005848 8.7e-12 74.7 234 28.2
TPR.G38909 Trifolium pratense HOM05D004589 ORTHO05D005848 8.7e-12 74.7 180 35.6
RhsimUnG0052600 Rhododendron simsii HOM05D004589 ORTHO05D005848 1.1e-11 74.3 244 29.1
RhsimUnG0165300 Rhododendron simsii HOM05D004589 ORTHO05D005848 1.1e-11 74.3 244 29.1
EL10Ac2g04152 Beta vulgaris HOM05D004589 ORTHO05D005848 2.5e-11 73.2 230 30.0
HPP92_024788 Vanilla planifolia HOM05D004589 ORTHO05D005848 2.4e-09 66.6 218 28.4
QL02p020149 Quercus lobata HOM05D004589 ORTHO05D005848 5.3e-09 65.5 137 35.8
Zm00001eb426010 Zea mays HOM05D004589 ORTHO05D005848 2.0e-08 63.5 105 41.0
Medtr7g069440 Medicago truncatula HOM05D004589 ORTHO05D005848 7.6e-08 61.6 98 42.9


User provided reference genes

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