Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO163G0072 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 1.3e-106 389.8 201 100.0
SMO119G0060 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 2.3e-47 193.0 183 61.7
Mapoly0129s0050 Marchantia polymorpha HOM05D005895 ORTHO05D007916 1.6e-29 133.7 159 47.2
CBR_g37584 Chara braunii HOM05D000019 ORTHO05D000048 5.8e-27 125.2 167 41.3
Prupe.1G247400 Prunus persica HOM05D005895 ORTHO05D007916 6.4e-26 121.7 138 49.3
Sed0023548 Sechium edule HOM05D005895 ORTHO05D007916 2.4e-25 119.8 175 42.3
Pp3c12_14340 Physcomitrium patens HOM05D005895 ORTHO05D007916 3.2e-25 119.4 160 43.8
MELO3C011963.2 Cucumis melo HOM05D005895 ORTHO05D007916 4.2e-25 119.0 178 42.7
Lj6A811T72 Lonicera japonica HOM05D005895 ORTHO05D007916 5.4e-25 118.6 174 43.1
MSTRG.2417 Avicennia marina HOM05D005895 ORTHO05D007916 7.1e-25 118.2 136 47.8
Sabra10G0023200 Salix brachista HOM05D005895 ORTHO05D007916 7.1e-25 118.2 177 42.9
Actinidia27801 Actinidia chinensis HOM05D005895 ORTHO05D007916 1.2e-24 117.5 136 46.3
Potri.010G044900 Populus trichocarpa HOM05D005895 ORTHO05D007916 1.2e-24 117.5 177 42.9
CsaV3_5G031240 Cucumis sativus L. HOM05D005895 ORTHO05D007916 1.6e-24 117.1 175 42.3
Thhalv10018314m.g Eutrema salsugineum HOM05D005895 ORTHO05D007916 1.6e-24 117.1 174 41.4
AL2G29960 Arabidopsis lyrata HOM05D005895 ORTHO05D007916 2.1e-24 116.7 174 42.5
AT1G70570 Arabidopsis thaliana HOM05D005895 ORTHO05D007916 3.5e-24 115.9 177 42.4
MBI10_g00734_MAGBIO Magnolia biondii HOM05D005895 ORTHO05D007916 3.5e-24 115.9 181 41.4
arahy.Tifrunner.gnm1.ann1.LQ91H7 Arachis hypogaea HOM05D005895 ORTHO05D007916 4.6e-24 115.5 136 47.8
CANSAT01G2589 Cannabis sativa HOM05D005895 ORTHO05D007916 4.6e-24 115.5 179 40.2
Eucgr.H02516 Eucalyptus grandis HOM05D005895 ORTHO05D007916 4.6e-24 115.5 174 42.0
FvH4_4g25910 Fragaria vesca HOM05D005895 ORTHO05D007916 4.6e-24 115.5 138 47.8
FAN12G2739 Fragaria x ananassa HOM05D005895 ORTHO05D007916 4.6e-24 115.5 138 47.8
Nitab4.5_0000370g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 4.6e-24 115.5 181 39.2
CAN.G7.20 Capsicum annuum HOM05D005895 ORTHO05D007916 6.0e-24 115.2 181 40.3
Cc04_g11160 Coffea canephora HOM05D005895 ORTHO05D007916 6.0e-24 115.2 177 41.2
ECA233G5390 Erigeron canadensis HOM05D005895 ORTHO05D007916 6.0e-24 115.2 136 47.1
Solyc04g025540.3 Solanum lycopersicum HOM05D005895 ORTHO05D007916 6.0e-24 115.2 181 40.9
Sopen04g012770 Solanum pennellii HOM05D005895 ORTHO05D007916 6.0e-24 115.2 181 40.9
BcaB05g24593 Brassica carinata HOM05D005895 ORTHO05D007916 7.8e-24 114.8 174 42.0
A02p16660 Brassica napus HOM05D005895 ORTHO05D007916 7.8e-24 114.8 174 42.0
BraA02t06722Z Brassica rapa HOM05D005895 ORTHO05D007916 7.8e-24 114.8 174 42.0
Migut.E00194 Erythranthe guttata HOM05D005895 ORTHO05D007916 7.8e-24 114.8 177 42.4
Lalb_Chr05g0228401 Lupinus albus HOM05D005895 ORTHO05D007916 7.8e-24 114.8 153 46.4
MD13G1098000 Malus domestica HOM05D005895 ORTHO05D007916 7.8e-24 114.8 175 40.6
Sp5g25720 Schrenkiella parvula HOM05D005895 ORTHO05D007916 7.8e-24 114.8 174 42.0
Zm00001eb231230 Zea mays HOM05D005895 ORTHO05D007916 7.8e-24 114.8 136 48.5
Cfa009199 Carpinus fangiana HOM05D005895 ORTHO05D007916 1.0e-23 114.4 176 41.5
Haze_12237 Corylus avellana HOM05D005895 ORTHO05D007916 1.0e-23 114.4 176 42.0
Duzib251G0200 Durio zibethinus HOM05D005895 ORTHO05D007916 1.0e-23 114.4 174 41.4
Lsat_1_v5_gn_8_150700 Lactuca sativa HOM05D005895 ORTHO05D007916 1.0e-23 114.4 136 47.1
Cpa.g.sc33.4 Carica papaya HOM05D005895 ORTHO05D007916 1.3e-23 114.0 148 44.6
Ciclev10030909m.g Citrus clementina HOM05D005895 ORTHO05D007916 1.3e-23 114.0 174 41.4
DCAR_007061 Daucus carota HOM05D005895 ORTHO05D007916 1.3e-23 114.0 136 45.6
FAN12G1268 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.3e-23 114.0 138 47.8
Gohir.A03G136300 Gossypium hirsutum HOM05D005895 ORTHO05D007916 1.7e-23 113.6 131 48.1
Aqoxy5G03807 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 2.3e-23 113.2 135 47.4
Carub.0002s1729 Capsella rubella HOM05D005895 ORTHO05D007916 2.3e-23 113.2 174 41.4
Phvul.003G063900 Phaseolus vulgaris HOM05D005895 ORTHO05D007916 2.3e-23 113.2 136 46.3
unitig_52.g17177 Utricularia gibba HOM05D005895 ORTHO05D007916 2.3e-23 113.2 177 40.7
AagrBONN_evm.TU.Sc2ySwM_368.1304 Anthoceros agrestis HOM05D005895 ORTHO05D007916 3.0e-23 112.8 65 75.4
C02p27920 Brassica napus HOM05D005895 ORTHO05D007916 3.0e-23 112.8 174 41.4
BolC2t08837H Brassica oleracea HOM05D005895 ORTHO05D007916 3.0e-23 112.8 174 41.4
CARHR063780 Cardamine hirsuta HOM05D005895 ORTHO05D007916 3.0e-23 112.8 174 41.4
Gorai.005G179700 Gossypium raimondii HOM05D005895 ORTHO05D007916 3.0e-23 112.8 176 41.5
MD16G1098900 Malus domestica HOM05D005895 ORTHO05D007916 3.0e-23 112.8 175 40.0
CSS0018548 Camellia sinensis var. sinensis HOM05D005895 ORTHO05D007916 3.9e-23 112.5 136 46.3
AUR62024296 Chenopodium quinoa HOM05D005895 ORTHO05D007916 3.9e-23 112.5 136 45.6
FAN17G0264 Fragaria x ananassa HOM05D005895 ORTHO05D007916 3.9e-23 112.5 138 47.1
PGR119G2505 Punica granatum HOM05D005895 ORTHO05D007916 3.9e-23 112.5 174 41.4
Atru.chr11.2133 Acer truncatum HOM05D005895 ORTHO05D007916 5.1e-23 112.1 175 40.0
BcaC03g15207 Brassica carinata HOM05D005895 ORTHO05D007916 5.1e-23 112.1 136 45.6
Hund06020 Selenicereus undatus HOM05D005895 ORTHO05D007916 5.1e-23 112.1 177 40.7
Sc04g0009430 Simmondsia chinensis HOM05D005895 ORTHO05D007916 5.1e-23 112.1 136 45.6
vmacro01130 Vaccinium macrocarpon HOM05D005895 ORTHO05D007916 5.1e-23 112.1 174 40.8
PSO017G6602 Papaver somniferum HOM05D005895 ORTHO05D007916 6.6e-23 111.7 177 41.8
PSO478G2260 Papaver somniferum HOM05D005895 ORTHO05D007916 6.6e-23 111.7 177 41.8
Thecc.02G257400 Theobroma cacao HOM05D005895 ORTHO05D007916 6.6e-23 111.7 138 45.7
GSVIVG01004086001 Vitis vinifera HOM05D005895 ORTHO05D007916 6.6e-23 111.7 136 45.6
Ah.03g133150 Amaranthus hybridus HOM05D005895 ORTHO05D007916 8.7e-23 111.3 136 44.9
AUR62005446 Chenopodium quinoa HOM05D005895 ORTHO05D007916 8.7e-23 111.3 136 45.6
Nitab4.5_0006332g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 8.7e-23 111.3 181 38.7
Atru.chr11.2117 Acer truncatum HOM05D005895 ORTHO05D007916 1.1e-22 110.9 175 40.0
COL.COLO4_24246 Corchorus olitorius HOM05D005895 ORTHO05D007916 1.1e-22 110.9 166 41.6
Gorai.012G172600 Gossypium raimondii HOM05D005895 ORTHO05D007916 1.1e-22 110.9 176 40.3
TWI36G0590 Tripterygium wilfordii HOM05D005895 ORTHO05D007916 1.1e-22 110.9 177 40.7
VMungo0251G0514 Vigna mungo HOM05D005895 ORTHO05D007916 1.5e-22 110.5 136 46.3
Glyma.08G283100 Glycine max HOM05D005895 ORTHO05D007916 1.9e-22 110.2 177 40.7
Os02g0131200 Oryza sativa ssp. japonica HOM05D005895 ORTHO05D007916 1.9e-22 110.2 174 42.0
FAN07G1086 Fragaria x ananassa HOM05D005895 ORTHO05D007916 2.5e-22 109.8 138 46.4
TAR371G0306 Trochodendron aralioides HOM05D005895 ORTHO05D007916 2.5e-22 109.8 136 46.3
Aa31LG4G10380 Aethionema arabicum HOM05D005895 ORTHO05D007916 4.3e-22 109.0 174 41.4
Gohir.D02G159600 Gossypium hirsutum HOM05D005895 ORTHO05D007916 4.3e-22 109.0 176 40.9
THA.LOC104822982 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 4.3e-22 109.0 175 39.4
Aqoxy3G01161 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 5.6e-22 108.6 136 44.9
Gohir.A04G136400 Gossypium hirsutum HOM05D005895 ORTHO05D007916 5.6e-22 108.6 176 39.2
Gohir.D04G179500 Gossypium hirsutum HOM05D005895 ORTHO05D007916 5.6e-22 108.6 138 44.2
QL03p058522 Quercus lobata HOM05D005895 ORTHO05D007916 7.3e-22 108.2 174 39.1
RcHm_v2.0_Chr4g0433361 Rosa chinensis HOM05D005895 ORTHO05D007916 7.3e-22 108.2 182 39.6
SalBow8G2958 Salvia bowleyana HOM05D005895 ORTHO05D007916 9.6e-22 107.8 177 38.4
HPP92_003081 Vanilla planifolia HOM05D005895 ORTHO05D007916 9.6e-22 107.8 180 39.4
ATR0585G083 Amborella trichopoda HOM05D005895 ORTHO05D007916 1.6e-21 107.1 176 42.0
Lj4g0008127 Lotus japonicus HOM05D005895 ORTHO05D007916 1.6e-21 107.1 174 40.2
Medtr8g069525 Medicago truncatula HOM05D005895 ORTHO05D007916 1.6e-21 107.1 174 40.8
FAN22G0931 Fragaria x ananassa HOM05D005895 ORTHO05D007916 2.1e-21 106.7 183 40.4
TPR.G34672 Trifolium pratense HOM05D005895 ORTHO05D007916 2.1e-21 106.7 174 40.8
CiPaw.05G183400 Carya illinoinensis HOM05D005895 ORTHO05D007916 1.1e-20 104.4 179 38.5
SHI17741 Sapria himalayana HOM05D000002 ORTHO05D000001 3.4e-19 99.4 141 38.3
Sed0009772 Sechium edule HOM05D005895 ORTHO05D007916 1.7e-18 97.1 65 69.2
EL10Ac6g13787 Beta vulgaris HOM05D005895 ORTHO05D007916 2.9e-18 96.3 199 34.2
Manes.12G024300 Manihot esculenta HOM05D005895 ORTHO05D007916 4.2e-17 92.4 65 63.1
arahy.Tifrunner.gnm1.ann1.0I87EX Arachis hypogaea HOM05D005895 ORTHO05D007916 7.1e-17 91.7 65 61.5
THA.LOC104818151 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 9.3e-17 91.3 65 61.5
Psat0s3772g0040 Pisum sativum HOM05D005895 ORTHO05D007916 2.7e-16 89.7 65 64.6
Ca_22578_v3 Cicer arietinum L. HOM05D005895 ORTHO05D007916 3.5e-16 89.4 65 64.6
Zm00001eb209010 Zea mays HOM05D005895 ORTHO05D007916 2.3e-15 86.7 136 39.0
HanXRQChr08g0208071 Helianthus annuus HOM05D005895 ORTHO05D007916 1.9e-14 83.6 136 36.8
Manes.13G025800 Manihot esculenta HOM05D005895 ORTHO05D007916 2.8e-13 79.7 65 60.0
Oeu059911.1 Olea europaea HOM05D005895 ORTHO05D007916 2.4e-09 66.6 125 38.4
Peaxi162Scf01242g00143 Petunia axillaris HOM05D005895 ORTHO05D007916 1.8e-07 60.5 34 73.5
Nn4g22655 Nelumbo nucifera HOM05D005895 ORTHO05D007916 6.7e-07 58.5 104 37.5
ClCG05G025660 Citrullus lanatus HOM05D005895 ORTHO05D007916 1.5e-06 57.4 100 40.0


User provided reference genes

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