Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO163G0051 Selaginella moellendorffii HOM05D005659 ORTHO05D007059 2.9e-50 201.4 91 100.0
Mapoly0064s0077 Marchantia polymorpha HOM05D005659 ORTHO05D007059 2.2e-42 175.3 89 87.6
Pp3c15_16700 Physcomitrium patens HOM05D005659 ORTHO05D007059 1.9e-41 172.2 89 85.4
Pp3c15_16690 Physcomitrium patens HOM05D005659 ORTHO05D007059 2.4e-41 171.8 89 84.3
Actinidia37070 Actinidia chinensis HOM05D005659 ORTHO05D007059 1.2e-40 169.5 91 82.4
SalBow6G0820 Salvia bowleyana HOM05D005659 ORTHO05D007059 6.0e-40 167.2 90 82.2
MSTRG.18774 Avicennia marina HOM05D005659 ORTHO05D007059 1.0e-39 166.4 90 82.2
HanXRQChr04g0128561 Helianthus annuus HOM05D005659 ORTHO05D007059 1.8e-39 165.6 89 83.1
Hma1.2p1_2164F.1_g315750 Hydrangea macrophylla HOM05D005659 ORTHO05D007059 2.3e-39 165.2 90 81.1
Actinidia35474 Actinidia chinensis HOM05D005659 ORTHO05D007059 3.0e-39 164.9 91 81.3
Lsat_1_v5_gn_7_85921 Lactuca sativa HOM05D005659 ORTHO05D007059 3.0e-39 164.9 90 82.2
ECA236G2734 Erigeron canadensis HOM05D005659 ORTHO05D007059 6.7e-39 163.7 90 81.1
Dinv22811 Davidia involucrata HOM05D005659 ORTHO05D007059 1.5e-38 162.5 90 80.0
HPP92_009876 Vanilla planifolia HOM05D005659 ORTHO05D007059 1.5e-38 162.5 91 78.0
ATR0579G079 Amborella trichopoda HOM05D005659 ORTHO05D007059 1.9e-38 162.2 84 84.5
Cc01_g08780 Coffea canephora HOM05D005659 ORTHO05D007059 1.9e-38 162.2 89 79.8
Lalb_Chr03g0028281 Lupinus albus HOM05D005659 ORTHO05D007059 1.9e-38 162.2 90 81.1
unitig_0.g1472 Utricularia gibba HOM05D005659 ORTHO05D007059 1.9e-38 162.2 90 82.2
Aqoxy4G02709 Aquilegia oxysepala HOM05D005659 ORTHO05D007059 2.5e-38 161.8 90 80.0
GSVIVG01036077001 Vitis vinifera HOM05D005659 ORTHO05D007059 2.5e-38 161.8 90 80.0
CSS0022105 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 5.6e-38 160.6 90 78.9
CSS0045008 Camellia sinensis var. sinensis HOM05D005659 ORTHO05D007059 5.6e-38 160.6 90 78.9
FvH4_3g25770 Fragaria vesca HOM05D005659 ORTHO05D007059 7.4e-38 160.2 91 80.2
FAN11G1786 Fragaria x ananassa HOM05D005659 ORTHO05D007059 7.4e-38 160.2 91 80.2
FAN25G1572 Fragaria x ananassa HOM05D005659 ORTHO05D007059 7.4e-38 160.2 91 80.2
Duzib170G0332 Durio zibethinus HOM05D005659 ORTHO05D007059 9.6e-38 159.8 90 78.9
MBI17_g28186_MAGBIO Magnolia biondii HOM05D005659 ORTHO05D007059 9.6e-38 159.8 90 77.8
Medtr4g052420 Medicago truncatula HOM05D005659 ORTHO05D007059 9.6e-38 159.8 90 80.0
RcHm_v2.0_Chr5g0046981 Rosa chinensis HOM05D005659 ORTHO05D007059 9.6e-38 159.8 91 80.2
SEGI_08129 Sequoiadendron giganteum HOM05D005659 ORTHO05D007059 1.3e-37 159.5 84 84.5
SGA_v2.0_scaffold7G03995 Striga asiatica HOM05D005659 ORTHO05D007059 1.6e-37 159.1 90 76.7
FAN21G2850 Fragaria x ananassa HOM05D005659 ORTHO05D007059 2.1e-37 158.7 91 79.1
PSO339G3866 Papaver somniferum HOM05D005659 ORTHO05D007059 2.1e-37 158.7 90 78.9
PSO384G5049 Papaver somniferum HOM05D005659 ORTHO05D007059 2.1e-37 158.7 90 78.9
CDE02G1582 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 2.8e-37 158.3 89 78.7
PGSC0003DMG400005890 Solanum tuberosum HOM05D005659 ORTHO05D007059 2.8e-37 158.3 89 78.7
TPR.G17220 Trifolium pratense HOM05D005659 ORTHO05D007059 2.8e-37 158.3 91 79.1
Migut.D02409 Erythranthe guttata HOM05D005659 ORTHO05D007059 3.7e-37 157.9 90 77.8
vmacro14338 Vaccinium macrocarpon HOM05D005659 ORTHO05D007059 3.7e-37 157.9 91 79.1
CDE08G1285 Ceratophyllum demersum HOM05D005659 ORTHO05D007059 4.8e-37 157.5 89 78.7
FAN16G1033 Fragaria x ananassa HOM05D005659 ORTHO05D007059 4.8e-37 157.5 91 78.0
Solyc06g074200.4 Solanum lycopersicum HOM05D005659 ORTHO05D007059 4.8e-37 157.5 89 77.5
Sopen06g030620 Solanum pennellii HOM05D005659 ORTHO05D007059 4.8e-37 157.5 89 77.5
Cfa009983 Carpinus fangiana HOM05D005659 ORTHO05D007059 6.2e-37 157.1 90 78.9
Haze_23342 Corylus avellana HOM05D005659 ORTHO05D007059 6.2e-37 157.1 90 80.0
Os04g0414700 Oryza sativa ssp. japonica HOM05D005659 ORTHO05D007059 6.2e-37 157.1 90 74.4
Oeu002356.1 Olea europaea HOM05D005659 ORTHO05D007059 8.1e-37 156.8 90 78.9
Prupe.6G137400 Prunus persica HOM05D005659 ORTHO05D007059 8.1e-37 156.8 91 78.0
EL10Ac4g08175 Beta vulgaris HOM05D005659 ORTHO05D007059 1.1e-36 156.4 90 76.7
THA.LOC104826438 Tarenaya hassleriana HOM05D005659 ORTHO05D007059 1.1e-36 156.4 90 77.8
VMungo1127G0741 Vigna mungo HOM05D005659 ORTHO05D007059 1.1e-36 156.4 90 78.9
CiPaw.14G097600 Carya illinoinensis HOM05D005659 ORTHO05D007059 1.4e-36 156.0 90 77.8
PGR102G0055 Punica granatum HOM05D005659 ORTHO05D007059 1.8e-36 155.6 90 77.8
arahy.Tifrunner.gnm1.ann1.QDSR7W Arachis hypogaea HOM05D005659 ORTHO05D007059 2.4e-36 155.2 90 77.8
MELO3C025587.2 Cucumis melo HOM05D005659 ORTHO05D007059 2.4e-36 155.2 89 78.7
Peaxi162Scf00091g00713 Petunia axillaris HOM05D005659 ORTHO05D007059 2.4e-36 155.2 89 77.5
Potri.004G199400 Populus trichocarpa HOM05D005659 ORTHO05D007059 2.4e-36 155.2 89 77.5
BcaB07g34086 Brassica carinata HOM05D005659 ORTHO05D007059 3.1e-36 154.8 89 77.5
BcaC07g42532 Brassica carinata HOM05D005659 ORTHO05D007059 3.1e-36 154.8 89 78.7
A06p05400 Brassica napus HOM05D005659 ORTHO05D007059 3.1e-36 154.8 89 77.5
C05p06520 Brassica napus HOM05D005659 ORTHO05D007059 3.1e-36 154.8 89 77.5
BolC5t29412H Brassica oleracea HOM05D005659 ORTHO05D007059 3.1e-36 154.8 89 77.5
BraA06t23749Z Brassica rapa HOM05D005659 ORTHO05D007059 3.1e-36 154.8 89 77.5
Ca_26075_v3 Cicer arietinum L. HOM05D005659 ORTHO05D007059 3.1e-36 154.8 90 78.9
DCAR_012226 Daucus carota HOM05D005659 ORTHO05D007059 3.1e-36 154.8 90 77.8
Aa31sc785G10 Aethionema arabicum HOM05D005659 ORTHO05D007059 4.0e-36 154.5 90 77.8
Ciclev10029515m.g Citrus clementina HOM05D005659 ORTHO05D007059 4.0e-36 154.5 89 77.5
Nitab4.5_0006903g0010 Nicotiana tabacum HOM05D005659 ORTHO05D007059 4.0e-36 154.5 90 76.7
AT1G08380 Arabidopsis thaliana HOM05D005659 ORTHO05D007059 5.3e-36 154.1 90 76.7
BcaC07g41946 Brassica carinata HOM05D005659 ORTHO05D007059 5.3e-36 154.1 89 77.5
A09p65930 Brassica napus HOM05D005659 ORTHO05D007059 5.3e-36 154.1 89 77.5
C08p50030 Brassica napus HOM05D005659 ORTHO05D007059 5.3e-36 154.1 89 77.5
BraA09t41937Z Brassica rapa HOM05D005659 ORTHO05D007059 5.3e-36 154.1 89 77.5
Carub.0001s0773 Capsella rubella HOM05D005659 ORTHO05D007059 5.3e-36 154.1 90 76.7
Cpa.g.sc195.32 Carica papaya HOM05D005659 ORTHO05D007059 5.3e-36 154.1 90 76.7
MD03G1150500 Malus domestica HOM05D005659 ORTHO05D007059 5.3e-36 154.1 89 78.7
Thecc.09G277800 Theobroma cacao HOM05D005659 ORTHO05D007059 5.3e-36 154.1 90 76.7
arahy.Tifrunner.gnm1.ann1.MVQ7LV Arachis hypogaea HOM05D005659 ORTHO05D007059 6.9e-36 153.7 90 77.8
A08p35240 Brassica napus HOM05D005659 ORTHO05D007059 6.9e-36 153.7 89 77.5
BolC8t52533H Brassica oleracea HOM05D005659 ORTHO05D007059 6.9e-36 153.7 89 77.5
CANSAT54G0546 Cannabis sativa HOM05D005659 ORTHO05D007059 6.9e-36 153.7 90 77.8
Glyma.12G092000 Glycine max HOM05D005659 ORTHO05D007059 6.9e-36 153.7 90 77.8
Gohir.A05G079200 Gossypium hirsutum HOM05D005659 ORTHO05D007059 6.9e-36 153.7 89 77.5
Gohir.D05G082100 Gossypium hirsutum HOM05D005659 ORTHO05D007059 6.9e-36 153.7 89 77.5
MD11G1169900 Malus domestica HOM05D005659 ORTHO05D007059 6.9e-36 153.7 89 78.7
TWI75G1160 Tripterygium wilfordii HOM05D005659 ORTHO05D007059 6.9e-36 153.7 90 76.7
Zm00001eb083680 Zea mays HOM05D005659 ORTHO05D007059 6.9e-36 153.7 90 74.4
CsaV3_1G015100 Cucumis sativus L. HOM05D005659 ORTHO05D007059 9.0e-36 153.3 89 77.5
Glyma.11G181100 Glycine max HOM05D005659 ORTHO05D007059 9.0e-36 153.3 90 77.8
AL1G18790 Arabidopsis lyrata HOM05D005659 ORTHO05D007059 1.2e-35 152.9 90 75.6
CAN.G919.41 Capsicum annuum HOM05D005659 ORTHO05D007059 1.2e-35 152.9 89 76.4
Eucgr.B03824 Eucalyptus grandis HOM05D005659 ORTHO05D007059 1.2e-35 152.9 90 76.7
Psat7g186640 Pisum sativum HOM05D005659 ORTHO05D007059 1.2e-35 152.9 89 77.5
BcaB03g13338 Brassica carinata HOM05D005659 ORTHO05D007059 2.0e-35 152.1 89 76.4
Sabra04G0134500 Salix brachista HOM05D005659 ORTHO05D007059 2.0e-35 152.1 89 77.5
EL10Ac4g08170 Beta vulgaris HOM05D005659 ORTHO05D007059 2.6e-35 151.8 90 74.4
CARHR008270 Cardamine hirsuta HOM05D005659 ORTHO05D007059 2.6e-35 151.8 89 74.2
Gohir.D07G115000 Gossypium hirsutum HOM05D005659 ORTHO05D007059 2.6e-35 151.8 90 76.7
Gorai.009G083700 Gossypium raimondii HOM05D005659 ORTHO05D007059 2.6e-35 151.8 89 76.4
Sp1g07030 Schrenkiella parvula HOM05D005659 ORTHO05D007059 2.6e-35 151.8 89 75.3
Atru.chr3.3161 Acer truncatum HOM05D005659 ORTHO05D007059 4.5e-35 151.0 90 74.4
Lj3g0027363 Lotus japonicus HOM05D005659 ORTHO05D007059 4.5e-35 151.0 90 75.6
Manes.04G000900 Manihot esculenta HOM05D005659 ORTHO05D007059 4.5e-35 151.0 90 76.7
Sed0025059 Sechium edule HOM05D005659 ORTHO05D007059 4.5e-35 151.0 89 76.4
Phvul.011G096400 Phaseolus vulgaris HOM05D005659 ORTHO05D007059 5.8e-35 150.6 90 75.6
Potri.009G160800 Populus trichocarpa HOM05D005659 ORTHO05D007059 9.9e-35 149.8 90 76.7
Gorai.001G123200 Gossypium raimondii HOM05D005659 ORTHO05D007059 1.3e-34 149.4 90 75.6
Sc12g0004680 Simmondsia chinensis HOM05D005659 ORTHO05D007059 1.3e-34 149.4 90 73.3
ClCG01G011760 Citrullus lanatus HOM05D005659 ORTHO05D007059 1.7e-34 149.1 86 77.9
Sabra09G0125800 Salix brachista HOM05D005659 ORTHO05D007059 2.2e-34 148.7 90 75.6
C08p03620 Brassica napus HOM05D005659 ORTHO05D007059 2.9e-34 148.3 89 74.2
Nitab4.5_0000937g0110 Nicotiana tabacum HOM05D005659 ORTHO05D007059 8.4e-34 146.7 84 77.4
BraA08t35432Z Brassica rapa HOM05D005659 ORTHO05D007059 7.1e-33 143.7 89 75.3
unitig_88.g27645 Utricularia gibba HOM05D005659 ORTHO05D007059 6.5e-26 120.6 68 79.4
TAR633G2174 Trochodendron aralioides HOM05D005659 ORTHO05D007059 8.4e-26 120.2 60 90.0
ATR0772G031 Amborella trichopoda HOM05D005659 ORTHO05D007059 1.9e-25 119.0 61 86.9
BcaB03g13340 Brassica carinata HOM05D005659 ORTHO05D007059 1.3e-23 112.8 89 59.6
Rhsim01G0203000 Rhododendron simsii HOM05D005659 ORTHO05D007059 3.0e-23 111.7 66 77.3
Cre07.g334550 Chlamydomonas reinhardtii HOM05D005659 ORTHO05D007059 1.9e-22 109.0 93 55.9
Nn2g14238 Nelumbo nucifera HOM05D005659 ORTHO05D007059 4.3e-22 107.8 61 77.0
AUR62001528 Chenopodium quinoa HOM05D005659 ORTHO05D007059 1.1e-20 103.2 60 76.7
Hund18778 Selenicereus undatus HOM05D005659 ORTHO05D007059 1.1e-20 103.2 61 73.8
QL01p011787 Quercus lobata HOM05D005659 ORTHO05D007059 2.4e-20 102.1 60 80.0
Ah.08g223250 Amaranthus hybridus HOM05D005659 ORTHO05D007059 6.5e-18 94.0 59 72.9
MCO01G581 Micromonas commoda HOM05D005659 ORTHO05D007059 7.2e-17 90.5 92 46.7
Thhalv10009047m.g Eutrema salsugineum HOM05D005659 ORTHO05D007059 1.8e-15 85.9 51 70.6
Nitab4.5_0005472g0080 Nicotiana tabacum HOM05D005659 ORTHO05D007059 2.9e-10 68.6 59 59.3
Peaxi162Scf00345g01024 Petunia axillaris HOM05D005659 ORTHO05D007059 1.6e-08 62.8 95 42.1
TAR623G1200 Trochodendron aralioides HOM05D005659 ORTHO05D007059 4.7e-08 61.2 31 87.1


User provided reference genes

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