Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO147G0408 Selaginella moellendorffii HOM05D023475 ORTHO05D026126 0.0e+00 1187.9 581 100.0
SMO330G0051 Selaginella moellendorffii HOM05D023475 ORTHO05D026126 1.8e-177 626.7 363 85.7
SMO115G0133 Selaginella moellendorffii HOM05D023475 ORTHO05D026126 5.2e-129 465.7 313 74.4
SMO166G0022 Selaginella moellendorffii HOM05D023475 ORTHO05D026126 7.5e-128 461.8 314 73.2
SMO107G0003 Selaginella moellendorffii HOM05D023475 ORTHO05D026126 8.6e-31 139.4 276 37.3
C07p17870 Brassica napus HOM05D002809 ORTHO05D004563 2.9e-10 71.2 189 31.2
BolC7t42293H Brassica oleracea HOM05D002809 ORTHO05D004563 2.9e-10 71.2 189 31.2
Duzib268G1054 Durio zibethinus HOM05D002809 ORTHO05D004563 3.7e-10 70.9 184 29.9
Duzib248G0261 Durio zibethinus HOM05D002809 ORTHO05D004563 8.3e-10 69.7 184 29.3
RcHm_v2.0_Chr4g0430081 Rosa chinensis HOM05D002809 ORTHO05D004563 1.1e-09 69.3 181 30.9
Migut.K00952 Erythranthe guttata HOM05D002809 ORTHO05D004563 1.4e-09 68.9 140 35.0
Cc11_g17010 Coffea canephora HOM05D002809 ORTHO05D004563 1.9e-09 68.6 188 30.9
Migut.M00305 Erythranthe guttata HOM05D000007 ORTHO05D000039 2.4e-09 68.2 186 27.4
Pp3c11_18710 Physcomitrium patens HOM05D004302 ORTHO05D004939 2.4e-09 68.2 361 24.9
Hund25470 Selenicereus undatus HOM05D002809 ORTHO05D004563 2.4e-09 68.2 240 27.5
Lalb_Chr23g0278141 Lupinus albus HOM05D002809 ORTHO05D004563 3.2e-09 67.8 187 31.0
Migut.M00306 Erythranthe guttata HOM05D000007 ORTHO05D000039 5.4e-09 67.0 195 27.2
FvH4_4g23620 Fragaria vesca HOM05D002809 ORTHO05D004563 5.4e-09 67.0 181 30.4
FAN17G0774 Fragaria x ananassa HOM05D002809 ORTHO05D004563 5.4e-09 67.0 181 30.4
Nn3g16449 Nelumbo nucifera HOM05D002809 ORTHO05D004563 5.4e-09 67.0 140 33.6
CAN.G70.10 Capsicum annuum HOM05D002809 ORTHO05D004563 7.1e-09 66.6 184 28.8
FAN12G0247 Fragaria x ananassa HOM05D002809 ORTHO05D004563 7.1e-09 66.6 181 30.4
BcaC05g26739 Brassica carinata HOM05D002809 ORTHO05D004563 9.2e-09 66.2 185 29.2
Mapoly0101s0058 Marchantia polymorpha HOM05D002809 ORTHO05D004939 1.2e-08 65.9 176 30.7
FAN07G0920 Fragaria x ananassa HOM05D002809 ORTHO05D004563 1.6e-08 65.5 137 35.0
SEGI_08933 Sequoiadendron giganteum HOM05D002809 ORTHO05D004563 1.6e-08 65.5 140 33.6
THA.LOC104807128 Tarenaya hassleriana HOM05D002809 ORTHO05D004563 1.6e-08 65.5 179 31.8
THA.LOC104807136 Tarenaya hassleriana HOM05D002809 ORTHO05D004563 1.6e-08 65.5 179 31.8
BraA09t39366Z Brassica rapa HOM05D002809 ORTHO05D004563 2.1e-08 65.1 185 28.6
CARHR026910 Cardamine hirsuta HOM05D002809 ORTHO05D004563 2.1e-08 65.1 185 28.1
Nitab4.5_0004914g0010 Nicotiana tabacum HOM05D002809 ORTHO05D004563 2.1e-08 65.1 181 28.7
BcaC05g26549 Brassica carinata HOM05D002809 ORTHO05D004563 2.7e-08 64.7 185 28.6
C05p26040 Brassica napus HOM05D002809 ORTHO05D004563 2.7e-08 64.7 185 28.6
CANSAT01G2827 Cannabis sativa HOM05D002809 ORTHO05D004563 2.7e-08 64.7 140 32.9
Lj3P1070T8 Lonicera japonica HOM05D002809 ORTHO05D004563 2.7e-08 64.7 184 28.8
Prupe.1G224600 Prunus persica HOM05D002809 ORTHO05D004563 2.7e-08 64.7 137 34.3
MSTRG.8011 Avicennia marina HOM05D002809 ORTHO05D004563 3.5e-08 64.3 183 30.1
A09p38610 Brassica napus HOM05D002809 ORTHO05D004563 3.5e-08 64.3 185 28.6
Sp1g23570 Schrenkiella parvula HOM05D002809 ORTHO05D004563 3.5e-08 64.3 185 28.6
AL1G40740 Arabidopsis lyrata HOM05D002809 ORTHO05D004563 4.6e-08 63.9 185 28.6
BolC5t31323H Brassica oleracea HOM05D002809 ORTHO05D004563 4.6e-08 63.9 185 28.6
BraA07t28977Z Brassica rapa HOM05D002809 ORTHO05D004563 4.6e-08 63.9 200 29.0
MBI07_g18750_MAGBIO Magnolia biondii HOM05D002809 ORTHO05D004563 4.6e-08 63.9 184 31.0
Dinv17569 Davidia involucrata HOM05D002809 ORTHO05D004563 6.0e-08 63.5 140 32.9
Glyma.08G104800 Glycine max HOM05D002809 ORTHO05D004563 6.0e-08 63.5 178 29.2
MD13G1120600 Malus domestica HOM05D002809 ORTHO05D004563 6.0e-08 63.5 181 28.7
Sc11g0000420 Simmondsia chinensis HOM05D002809 ORTHO05D004563 6.0e-08 63.5 233 29.6
AT1G27340 Arabidopsis thaliana HOM05D002809 ORTHO05D004563 7.8e-08 63.2 185 28.6
Thhalv10007553m.g Eutrema salsugineum HOM05D002809 ORTHO05D004563 1.3e-07 62.4 185 28.6
Oeu006522.1 Olea europaea HOM05D002809 ORTHO05D004563 1.3e-07 62.4 137 32.8
SalBow2G0967 Salvia bowleyana HOM05D002809 ORTHO05D004563 1.3e-07 62.4 184 28.8
Actinidia20715 Actinidia chinensis HOM05D002809 ORTHO05D004563 1.7e-07 62.0 184 28.3
HanXRQChr12g0361241 Helianthus annuus HOM05D002809 ORTHO05D004563 1.7e-07 62.0 127 32.3
Peaxi162Scf00128g00136 Petunia axillaris HOM05D002809 ORTHO05D004563 3.0e-07 61.2 184 29.3
Solyc05g015520.3 Solanum lycopersicum HOM05D002809 ORTHO05D004563 3.0e-07 61.2 184 28.3
Sopen12g034970 Solanum pennellii HOM05D002809 ORTHO05D004563 3.0e-07 61.2 184 28.3
THA.LOC104825498 Tarenaya hassleriana HOM05D002809 ORTHO05D004563 3.0e-07 61.2 179 30.2
Pp3c7_9930 Physcomitrium patens HOM05D002809 ORTHO05D004939 3.9e-07 60.8 195 29.2
HanXRQChr08g0209511 Helianthus annuus HOM05D000007 ORTHO05D000039 5.1e-07 60.5 131 30.5
Rhsim12G0092200 Rhododendron simsii HOM05D002809 ORTHO05D004563 6.6e-07 60.1 138 34.1
Hund06095 Selenicereus undatus HOM05D002809 ORTHO05D004563 8.6e-07 59.7 184 27.7
CSS0014036 Camellia sinensis var. sinensis HOM05D002809 ORTHO05D004563 1.1e-06 59.3 140 31.4
ECA233G5207 Erigeron canadensis HOM05D002809 ORTHO05D004563 1.1e-06 59.3 130 32.3
PGSC0003DMG400034305 Solanum tuberosum HOM05D002809 ORTHO05D004563 1.1e-06 59.3 140 32.1
vmacro16104 Vaccinium macrocarpon HOM05D002809 ORTHO05D004563 1.1e-06 59.3 184 27.7
Lsat_1_v5_gn_7_3280 Lactuca sativa HOM05D000007 ORTHO05D000039 1.5e-06 58.9 135 32.6
SMO364G0869 Selaginella moellendorffii HOM05D003005 ORTHO05D004563 1.5e-06 58.9 124 33.1
HanXRQChr12g0379041 Helianthus annuus HOM05D000007 ORTHO05D000039 1.9e-06 58.5 139 32.4
EL10Ac6g13516 Beta vulgaris HOM05D002809 ORTHO05D004563 2.5e-06 58.2 126 33.3
HanXRQChr07g0186181 Helianthus annuus HOM05D000007 ORTHO05D000039 2.5e-06 58.2 132 31.1
Oeu004454.1 Olea europaea HOM05D002809 ORTHO05D004563 3.3e-06 57.8 156 28.8
SGA_v2.0_scaffold5G02617 Striga asiatica HOM05D000007 ORTHO05D000039 3.3e-06 57.8 182 31.9
CAN.G500.22 Capsicum annuum HOM05D000007 ORTHO05D000017 4.3e-06 57.4 203 29.1
Ah.04g164550 Amaranthus hybridus HOM05D005977 ORTHO05D007546 5.6e-06 57.0 120 30.8
BraA09t36769Z Brassica rapa HOM05D000209 ORTHO05D000129 5.6e-06 57.0 126 31.7
Medtr7g055977 Medicago truncatula HOM05D000007 ORTHO05D000017 5.6e-06 57.0 129 32.6
unitig_747.g21123 Utricularia gibba HOM05D002809 ORTHO05D004563 5.6e-06 57.0 184 30.4
Actinidia09645 Actinidia chinensis HOM05D002809 ORTHO05D004563 7.3e-06 56.6 140 30.7
HanXRQChr05g0159581 Helianthus annuus HOM05D000007 ORTHO05D000039 7.3e-06 56.6 129 27.9
HanXRQChr08g0209471 Helianthus annuus HOM05D000007 ORTHO05D000039 7.3e-06 56.6 129 27.9
Mapoly0003s0155 Marchantia polymorpha HOM05D002809 ORTHO05D004563 7.3e-06 56.6 177 29.4
A09p11310 Brassica napus HOM05D000209 ORTHO05D000129 9.6e-06 56.2 126 31.7


User provided reference genes

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