Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO147G0325 Selaginella moellendorffii HOM05D004986 ORTHO05D005898 3.6e-222 774.6 403 100.0
Mapoly0024s0125 Marchantia polymorpha HOM05D004986 ORTHO05D005898 7.7e-79 298.5 422 45.0
Zm00001eb072790 Zea mays HOM05D004986 ORTHO05D005898 5.1e-75 285.8 417 42.2
AagrBONN_evm.TU.Sc2ySwM_362.836 Anthoceros agrestis HOM05D004986 ORTHO05D005898 8.8e-75 285.0 477 39.6
Os04g0584800 Oryza sativa ssp. japonica HOM05D004986 ORTHO05D005898 8.8e-75 285.0 417 41.5
Pp3c17_5460 Physcomitrium patens HOM05D004986 ORTHO05D005898 9.7e-74 281.6 451 40.8
PSO170G5246 Papaver somniferum HOM05D004986 ORTHO05D005898 2.9e-70 270.0 407 42.8
SEGI_13138 Sequoiadendron giganteum HOM05D004986 ORTHO05D005898 6.5e-70 268.9 390 43.1
ATR0807G113 Amborella trichopoda HOM05D004986 ORTHO05D005898 5.5e-69 265.8 461 39.7
Migut.B01487 Erythranthe guttata HOM05D004986 ORTHO05D005898 9.4e-69 265.0 398 42.5
Dinv28304 Davidia involucrata HOM05D004986 ORTHO05D005898 1.2e-68 264.6 399 42.4
TAR628G0962 Trochodendron aralioides HOM05D004986 ORTHO05D005898 4.7e-68 262.7 415 41.0
Nitab4.5_0004269g0070 Nicotiana tabacum HOM05D004986 ORTHO05D005898 1.8e-67 260.8 413 41.2
TAR381G0383 Trochodendron aralioides HOM05D004986 ORTHO05D005898 2.3e-67 260.4 397 40.8
Nitab4.5_0000495g0010 Nicotiana tabacum HOM05D004986 ORTHO05D005898 8.8e-67 258.5 415 41.0
GSVIVG01022308001 Vitis vinifera HOM05D004986 ORTHO05D005898 1.1e-66 258.1 403 41.9
SalBow5G3763 Salvia bowleyana HOM05D004986 ORTHO05D005898 2.6e-66 256.9 399 40.9
Aqoxy6G01559 Aquilegia oxysepala HOM05D004986 ORTHO05D005898 3.3e-66 256.5 412 41.0
Manes.02G115500 Manihot esculenta HOM05D004986 ORTHO05D005898 5.7e-66 255.8 411 41.6
Hma1.2p1_0085F.1_g044450 Hydrangea macrophylla HOM05D004986 ORTHO05D005898 2.8e-65 253.4 402 41.8
QL11p035166 Quercus lobata HOM05D004986 ORTHO05D005898 4.8e-65 252.7 409 41.1
AT5G65960 Arabidopsis thaliana HOM05D004986 ORTHO05D005898 8.2e-65 251.9 399 40.6
MD15G1228500 Malus domestica HOM05D004986 ORTHO05D005898 1.4e-64 251.1 414 39.6
DCAR_024399 Daucus carota HOM05D004986 ORTHO05D005898 2.4e-64 250.4 420 41.9
Aa31LG1G14460 Aethionema arabicum HOM05D004986 ORTHO05D005898 7.0e-64 248.8 392 40.3
arahy.Tifrunner.gnm1.ann1.H550X0 Arachis hypogaea HOM05D004986 ORTHO05D005898 7.0e-64 248.8 398 40.2
Rhsim10G0191900 Rhododendron simsii HOM05D004986 ORTHO05D005898 9.1e-64 248.4 398 41.2
RcHm_v2.0_Chr2g0096901 Rosa chinensis HOM05D004986 ORTHO05D005898 9.1e-64 248.4 414 40.6
Lsat_1_v5_gn_2_73561 Lactuca sativa HOM05D004986 ORTHO05D005898 2.6e-63 246.9 397 41.1
Peaxi162Scf00920g00114 Petunia axillaris HOM05D004986 ORTHO05D005898 7.7e-63 245.4 422 37.0
Cc07_g12070 Coffea canephora HOM05D004986 ORTHO05D005898 1.0e-62 245.0 426 40.4
FAN19G1207 Fragaria x ananassa HOM05D004986 ORTHO05D005898 1.0e-62 245.0 405 40.0
Carub.0008s2856 Capsella rubella HOM05D004986 ORTHO05D005898 1.3e-62 244.6 402 39.1
AL8G45680 Arabidopsis lyrata HOM05D004986 ORTHO05D005898 2.2e-62 243.8 405 38.8
Lj3g0020964 Lotus japonicus HOM05D004986 ORTHO05D005898 2.2e-62 243.8 395 40.8
PGR119G1257 Punica granatum HOM05D004986 ORTHO05D005898 2.2e-62 243.8 402 41.0
PGSC0003DMG400018667 Solanum tuberosum HOM05D004986 ORTHO05D005898 2.2e-62 243.8 412 37.9
Actinidia32993 Actinidia chinensis HOM05D004986 ORTHO05D005898 2.9e-62 243.4 405 40.2
Hund21384 Selenicereus undatus HOM05D004986 ORTHO05D005898 2.9e-62 243.4 390 40.8
Cfa007104 Carpinus fangiana HOM05D004986 ORTHO05D005898 3.8e-62 243.0 413 39.7
Lalb_Chr05g0214931 Lupinus albus HOM05D004986 ORTHO05D005898 3.8e-62 243.0 397 39.5
Sopen03g005900 Solanum pennellii HOM05D004986 ORTHO05D005898 3.8e-62 243.0 412 37.4
TWI53G0851 Tripterygium wilfordii HOM05D004986 ORTHO05D005898 3.8e-62 243.0 394 41.1
FvH4_1g10130 Fragaria vesca HOM05D004986 ORTHO05D005898 5.0e-62 242.7 405 39.8
FAN23G1121 Fragaria x ananassa HOM05D004986 ORTHO05D005898 5.0e-62 242.7 424 38.7
HanXRQChr10g0316221 Helianthus annuus HOM05D004986 ORTHO05D005898 5.0e-62 242.7 387 41.6
Nn5g31026 Nelumbo nucifera HOM05D004986 ORTHO05D005898 5.0e-62 242.7 466 36.9
Prupe.7G185600 Prunus persica HOM05D004986 ORTHO05D005898 5.0e-62 242.7 408 38.7
Solyc03g032050.4 Solanum lycopersicum HOM05D004986 ORTHO05D005898 6.5e-62 242.3 412 37.4
Oeu002901.1 Olea europaea HOM05D004986 ORTHO05D005898 8.5e-62 241.9 406 39.9
Actinidia22885 Actinidia chinensis HOM05D004986 ORTHO05D005898 1.1e-61 241.5 413 38.7
Sp2g30730 Schrenkiella parvula HOM05D004986 ORTHO05D005898 1.5e-61 241.1 400 38.8
Ciclev10025602m.g Citrus clementina HOM05D004986 ORTHO05D005898 1.9e-61 240.7 402 41.8
Thhalv10004346m.g Eutrema salsugineum HOM05D004986 ORTHO05D005898 1.9e-61 240.7 398 39.7
Atru.chr10.1816 Acer truncatum HOM05D004986 ORTHO05D005898 2.5e-61 240.4 404 41.1
CAN.G647.4 Capsicum annuum HOM05D004986 ORTHO05D005898 3.2e-61 240.0 410 38.8
Sed0027663 Sechium edule HOM05D004986 ORTHO05D005898 3.2e-61 240.0 397 40.1
CSS0007723 Camellia sinensis var. sinensis HOM05D004986 ORTHO05D005898 4.2e-61 239.6 409 39.9
Atru.chr10.1831 Acer truncatum HOM05D004986 ORTHO05D005898 5.5e-61 239.2 404 40.8
A09p10240 Brassica napus HOM05D004986 ORTHO05D005898 5.5e-61 239.2 385 39.7
FAN26G2552 Fragaria x ananassa HOM05D004986 ORTHO05D005898 5.5e-61 239.2 409 38.1
FAN28G2129 Fragaria x ananassa HOM05D004986 ORTHO05D005898 5.5e-61 239.2 409 38.1
FAN23G2177 Fragaria x ananassa HOM05D004986 ORTHO05D005898 7.2e-61 238.8 406 39.9
Manes.01G157000 Manihot esculenta HOM05D004986 ORTHO05D005898 7.2e-61 238.8 405 37.3
Eucgr.I02210 Eucalyptus grandis HOM05D004986 ORTHO05D005898 3.6e-60 236.5 418 39.0
unitig_26.g8860 Utricularia gibba HOM05D004986 ORTHO05D005898 4.7e-60 236.1 390 41.0
Gorai.003G001100 Gossypium raimondii HOM05D004986 ORTHO05D005898 6.1e-60 235.7 407 38.8
Medtr8g073110 Medicago truncatula HOM05D004986 ORTHO05D005898 1.0e-59 235.0 407 38.3
MSTRG.17107 Avicennia marina HOM05D004986 ORTHO05D005898 1.8e-59 234.2 403 39.5
Psat4g105800 Pisum sativum HOM05D004986 ORTHO05D005898 1.8e-59 234.2 401 39.4
Ca_02840_v3 Cicer arietinum L. HOM05D004986 ORTHO05D005898 3.0e-59 233.4 399 39.8
Gohir.D03G000700 Gossypium hirsutum HOM05D004986 ORTHO05D005898 3.0e-59 233.4 406 38.9
ECA240G4103 Erigeron canadensis HOM05D004986 ORTHO05D005898 5.2e-59 232.6 390 40.3
Glyma.16G112300 Glycine max HOM05D004986 ORTHO05D005898 5.2e-59 232.6 398 38.7
Cpa.g.sc91.49 Carica papaya HOM05D004986 ORTHO05D005898 8.8e-59 231.9 401 38.2
BraA09t36669Z Brassica rapa HOM05D004986 ORTHO05D005898 2.0e-58 230.7 384 39.6
Gorai.005G068600 Gossypium raimondii HOM05D004986 ORTHO05D005898 2.0e-58 230.7 402 36.8
C09p12150 Brassica napus HOM05D004986 ORTHO05D005898 9.7e-58 228.4 380 38.4
Gohir.D02G061000 Gossypium hirsutum HOM05D004986 ORTHO05D005898 9.7e-58 228.4 402 36.6
Gohir.A02G179000 Gossypium hirsutum HOM05D004986 ORTHO05D005898 1.3e-57 228.0 431 37.1
BolC9t54105H Brassica oleracea HOM05D004986 ORTHO05D005898 1.7e-57 227.6 381 38.8
BcaC04g23101 Brassica carinata HOM05D004986 ORTHO05D005898 2.2e-57 227.3 383 38.6
CsaV3_4G027660 Cucumis sativus L. HOM05D004986 ORTHO05D005898 2.8e-57 226.9 392 37.8
Gohir.A02G055800 Gossypium hirsutum HOM05D004986 ORTHO05D005898 2.8e-57 226.9 400 37.2
MELO3C026343.2 Cucumis melo HOM05D004986 ORTHO05D005898 3.7e-57 226.5 403 37.0
Thecc.01G002600 Theobroma cacao HOM05D004986 ORTHO05D005898 3.7e-57 226.5 401 39.4
VMungo0331G1669 Vigna mungo HOM05D004986 ORTHO05D005898 6.3e-57 225.7 403 38.7
HPP92_007280 Vanilla planifolia HOM05D004986 ORTHO05D005898 1.4e-56 224.6 405 37.5
Lj2C503G0 Lonicera japonica HOM05D004986 ORTHO05D005898 3.1e-56 223.4 356 41.0
CiPaw.07G000800 Carya illinoinensis HOM05D004986 ORTHO05D005898 4.1e-56 223.0 402 38.8
CARHR257450 Cardamine hirsuta HOM05D004986 ORTHO05D005898 9.1e-56 221.9 403 38.7
MBI13_g20494_MAGBIO Magnolia biondii HOM05D004986 ORTHO05D005898 1.6e-55 221.1 468 34.8
THA.LOC104826450 Tarenaya hassleriana HOM05D004986 ORTHO05D005898 1.6e-55 221.1 395 37.7
Hma1.2p1_0085F.1_g044460 Hydrangea macrophylla HOM05D004986 ORTHO05D005898 2.7e-55 220.3 232 50.4
Duzib106G1274 Durio zibethinus HOM05D004986 ORTHO05D005898 3.5e-55 219.9 401 39.2
SGA_v2.0_scaffold52G19267 Striga asiatica HOM05D004986 ORTHO05D005898 4.5e-55 219.5 361 39.1
Phvul.010G020700 Phaseolus vulgaris HOM05D004986 ORTHO05D005898 5.9e-55 219.2 401 38.9
ClCG04G005010 Citrullus lanatus HOM05D004986 ORTHO05D005898 7.7e-55 218.8 392 37.8
arahy.Tifrunner.gnm1.ann1.UZ6AL0 Arachis hypogaea HOM05D004986 ORTHO05D005898 1.0e-54 218.4 431 36.7
Glyma.09G196600 Glycine max HOM05D004986 ORTHO05D005898 1.0e-54 218.4 395 37.5
CANSAT21G0416 Cannabis sativa HOM05D004986 ORTHO05D005898 1.7e-54 217.6 409 36.7
vmacro20612 Vaccinium macrocarpon HOM05D004986 ORTHO05D005898 2.9e-54 216.9 386 38.3
Haze_03636 Corylus avellana HOM05D004986 ORTHO05D005898 5.0e-54 216.1 373 38.3
Ah.10g026930 Amaranthus hybridus HOM05D004986 ORTHO05D005898 1.9e-53 214.2 401 38.9
BcaB04g20132 Brassica carinata HOM05D004986 ORTHO05D005898 1.9e-53 214.2 399 37.8
Sabra02G0136200 Salix brachista HOM05D004986 ORTHO05D005898 6.1e-52 209.1 392 39.0
EL10Ac3g05234 Beta vulgaris HOM05D004986 ORTHO05D005898 8.0e-52 208.8 391 38.4
SGA_v2.0_scaffold34G13577 Striga asiatica HOM05D004986 ORTHO05D005898 1.4e-51 208.0 436 34.4
CARHR281810 Cardamine hirsuta HOM05D004986 ORTHO05D005898 1.2e-50 204.9 273 42.5
Potri.002G177100 Populus trichocarpa HOM05D004986 ORTHO05D005898 1.5e-50 204.5 319 42.3
Psat0s3210g0040 Pisum sativum HOM05D004986 ORTHO05D005898 3.4e-50 203.4 276 42.0
CDE07G1230 Ceratophyllum demersum HOM05D004986 ORTHO05D005898 9.8e-50 201.8 250 44.4
AUR62006055 Chenopodium quinoa HOM05D004986 ORTHO05D005898 2.2e-49 200.7 392 37.0
Sc05g0009010 Simmondsia chinensis HOM05D004986 ORTHO05D005898 5.9e-47 192.6 300 41.0
CDE04G0629 Ceratophyllum demersum HOM05D004986 ORTHO05D005898 1.0e-46 191.8 399 34.8
COL.COLO4_34271 Corchorus olitorius HOM05D004986 ORTHO05D005898 5.0e-46 189.5 301 41.5
MD02G1112100 Malus domestica HOM05D004986 ORTHO05D005898 9.5e-37 158.7 177 45.2
Potri.007G064500 Populus trichocarpa HOM05D004986 ORTHO05D005898 2.8e-36 157.1 373 33.2
CBR_g24177 Chara braunii HOM05D004986 ORTHO05D005898 3.0e-35 153.7 327 36.4
Atru.chr3.37 Acer truncatum HOM05D004986 ORTHO05D005898 1.5e-34 151.4 402 32.6
Oeu037412.2 Olea europaea HOM05D004986 ORTHO05D005898 6.4e-33 146.0 404 32.7
Dinv40206 Davidia involucrata HOM05D004986 ORTHO05D005898 3.9e-30 136.7 244 39.3
Lj4g0017944 Lotus japonicus HOM05D004986 ORTHO05D005898 1.9e-29 134.4 308 34.4
MD02G1113000 Malus domestica HOM05D004986 ORTHO05D005898 6.2e-28 129.4 167 41.3
HanXRQChr13g0388301 Helianthus annuus HOM05D004986 ORTHO05D005898 6.8e-27 125.9 166 45.2
MD02G1109300 Malus domestica HOM05D004986 ORTHO05D005898 3.4e-26 123.6 157 41.4
HanXRQChr13g0388311 Helianthus annuus HOM05D004986 ORTHO05D005898 5.8e-26 122.9 204 41.2
Sed0024004 Sechium edule HOM05D004986 ORTHO05D005898 8.3e-25 119.0 294 32.3
Atru.chr3.33 Acer truncatum HOM05D004986 ORTHO05D005898 9.2e-24 115.5 113 53.1
AUR62035574 Chenopodium quinoa HOM05D004986 ORTHO05D005898 6.2e-20 102.8 167 34.7
MD02G1112600 Malus domestica HOM05D004986 ORTHO05D005898 9.5e-13 79.0 72 50.0
MBI15_g18235_MAGBIO Magnolia biondii HOM05D004986 ORTHO05D005898 1.8e-11 74.7 126 38.9
SGA_v2.0_scaffold578G53029 Striga asiatica HOM05D004986 ORTHO05D005898 5.2e-11 73.2 193 32.1
Zm00001eb355160 Zea mays HOM05D004986 ORTHO05D005898 2.3e-06 57.8 86 40.7


User provided reference genes

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