Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO147G0274 Selaginella moellendorffii HOM05D001937 ORTHO05D007024 0.0e+00 2559.3 1285 100.0
Mapoly0035s0055 Marchantia polymorpha HOM05D001937 ORTHO05D007024 0.0e+00 1983.4 1279 77.4
AagrBONN_evm.TU.Sc2ySwM_368.2008 Anthoceros agrestis HOM05D001937 ORTHO05D007024 0.0e+00 1939.9 1254 77.0
SEGI_01532 Sequoiadendron giganteum HOM05D001937 ORTHO05D007024 0.0e+00 1924.8 1276 75.0
Prupe.2G098100 Prunus persica HOM05D001937 ORTHO05D007024 0.0e+00 1848.2 1265 72.4
Haze_10549 Corylus avellana HOM05D001937 ORTHO05D007024 0.0e+00 1846.6 1266 72.9
Manes.11G123000 Manihot esculenta HOM05D001937 ORTHO05D007024 0.0e+00 1844.3 1268 72.5
Nitab4.5_0000761g0030 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 1843.2 1275 71.8
Thhalv10027622m.g Eutrema salsugineum HOM05D001937 ORTHO05D007024 0.0e+00 1842.4 1265 72.0
Lsat_1_v5_gn_6_11080 Lactuca sativa HOM05D001937 ORTHO05D007024 0.0e+00 1840.9 1260 72.7
Medtr4g093870 Medicago truncatula HOM05D001937 ORTHO05D007024 0.0e+00 1840.9 1268 72.6
COL.COLO4_33143 Corchorus olitorius HOM05D001937 ORTHO05D007024 0.0e+00 1840.5 1274 71.7
Hma1.2p1_0587F.1_g184190 Hydrangea macrophylla HOM05D001937 ORTHO05D007024 0.0e+00 1840.1 1266 72.4
Thecc.02G153900 Theobroma cacao HOM05D001937 ORTHO05D007024 0.0e+00 1840.1 1274 72.0
Cfa005699 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 1839.7 1266 72.6
Lj1P823T23 Lonicera japonica HOM05D001937 ORTHO05D007024 0.0e+00 1839.7 1267 72.7
Lj4g0006057 Lotus japonicus HOM05D001937 ORTHO05D007024 0.0e+00 1838.5 1273 72.0
CARHR214920 Cardamine hirsuta HOM05D001937 ORTHO05D007024 0.0e+00 1837.4 1265 72.0
Aqoxy4G02972 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1836.2 1265 72.1
TWI12G0886 Tripterygium wilfordii HOM05D001937 ORTHO05D007024 0.0e+00 1835.8 1269 72.0
BraA07t29656Z Brassica rapa HOM05D001937 ORTHO05D007024 0.0e+00 1835.5 1265 71.9
Eucgr.I01066 Eucalyptus grandis HOM05D001937 ORTHO05D007024 0.0e+00 1835.5 1272 72.2
QL11p024047 Quercus lobata HOM05D001937 ORTHO05D007024 0.0e+00 1835.5 1266 72.5
A07p19500 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 1834.7 1265 71.8
MD07G1077100 Malus domestica HOM05D001937 ORTHO05D007024 0.0e+00 1834.7 1265 71.9
Duzib132G1189 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 1833.2 1269 71.6
RcHm_v2.0_Chr1g0337071 Rosa chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1833.2 1267 72.1
EL10Ac7g17851 Beta vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 1832.8 1270 72.6
FvH4_7g07120 Fragaria vesca HOM05D001937 ORTHO05D007024 0.0e+00 1832.8 1262 72.2
FAN06G4695 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 1832.8 1262 72.2
Sp7g04200 Schrenkiella parvula HOM05D001937 ORTHO05D007024 0.0e+00 1832.8 1265 71.5
BolC6t36984H Brassica oleracea HOM05D001937 ORTHO05D007024 0.0e+00 1832.4 1266 71.7
CSS0034620 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 1832.4 1271 71.5
ATR0559G108 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 1832.0 1264 72.5
MBI05_g10862_MAGBIO Magnolia biondii HOM05D001937 ORTHO05D007024 0.0e+00 1832.0 1269 71.7
Aa31LG9G17330 Aethionema arabicum HOM05D001937 ORTHO05D007024 0.0e+00 1831.6 1271 71.5
AT5G37830 Arabidopsis thaliana HOM05D001937 ORTHO05D007024 0.0e+00 1830.1 1265 71.7
AUR62001097 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 1830.1 1270 72.4
Migut.N00430 Erythranthe guttata HOM05D001937 ORTHO05D007024 0.0e+00 1829.7 1267 72.1
Sopen09g005280 Solanum pennellii HOM05D001937 ORTHO05D007024 0.0e+00 1829.7 1274 70.8
AUR62008924 Chenopodium quinoa HOM05D001937 ORTHO05D007024 0.0e+00 1829.3 1270 72.4
Gorai.005G213100 Gossypium raimondii HOM05D001937 ORTHO05D007024 0.0e+00 1829.3 1272 71.4
C06p17940 Brassica napus HOM05D001937 ORTHO05D007024 0.0e+00 1828.9 1266 71.6
CSS0040995 Camellia sinensis var. sinensis HOM05D001937 ORTHO05D007024 0.0e+00 1828.9 1271 71.4
FAN03G1993 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 1828.9 1262 72.2
Aqoxy2G01413 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1828.5 1265 71.8
Carub.0007s3301 Capsella rubella HOM05D001937 ORTHO05D007024 0.0e+00 1828.5 1265 71.3
CAN.G97.40 Capsicum annuum HOM05D001937 ORTHO05D007024 0.0e+00 1828.5 1274 71.0
Solyc09g010560.3 Solanum lycopersicum HOM05D001937 ORTHO05D007024 0.0e+00 1828.5 1274 70.8
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 1828.1 1258 72.3
AL7G46730 Arabidopsis lyrata HOM05D001937 ORTHO05D007024 0.0e+00 1827.4 1265 71.7
MELO3C021250.2 Cucumis melo HOM05D001937 ORTHO05D007024 0.0e+00 1827.4 1279 71.2
Gohir.D02G190400 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 1826.6 1272 71.2
Sabra04G0061200 Salix brachista HOM05D001937 ORTHO05D007024 0.0e+00 1825.1 1276 71.5
Ciclev10018533m.g Citrus clementina HOM05D001937 ORTHO05D007024 0.0e+00 1824.7 1267 72.0
Atru.chr12.1853 Acer truncatum HOM05D001937 ORTHO05D007024 0.0e+00 1823.1 1271 71.7
Gohir.A03G167300 Gossypium hirsutum HOM05D001937 ORTHO05D007024 0.0e+00 1823.1 1272 71.1
Ca_18373_v3 Cicer arietinum L. HOM05D001937 ORTHO05D007024 0.0e+00 1822.8 1271 71.8
CsaV3_6G000030 Cucumis sativus L. HOM05D001937 ORTHO05D007024 0.0e+00 1822.8 1284 70.8
Glyma.08G069400 Glycine max HOM05D001937 ORTHO05D007024 0.0e+00 1822.4 1268 71.7
Potri.004G091000 Populus trichocarpa HOM05D001937 ORTHO05D007024 0.0e+00 1822.0 1274 71.6
Ah.08g214380 Amaranthus hybridus HOM05D001937 ORTHO05D007024 0.0e+00 1821.6 1270 71.7
Sc14g0006180 Simmondsia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1821.6 1267 72.1
PSO017G7212 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 1820.4 1267 71.7
THA.LOC104823845 Tarenaya hassleriana HOM05D001937 ORTHO05D007024 0.0e+00 1820.4 1269 71.6
PGSC0003DMG400008847 Solanum tuberosum HOM05D001937 ORTHO05D007024 0.0e+00 1818.5 1274 70.6
Duzib248G1173 Durio zibethinus HOM05D001937 ORTHO05D007024 0.0e+00 1817.0 1274 70.8
Phvul.002G211700 Phaseolus vulgaris HOM05D001937 ORTHO05D007024 0.0e+00 1816.6 1267 71.8
SalBow1G8218 Salvia bowleyana HOM05D001937 ORTHO05D007024 0.0e+00 1815.8 1268 71.2
DCAR_003140 Daucus carota HOM05D001937 ORTHO05D007024 0.0e+00 1815.0 1274 71.4
HanXRQChr10g0312981 Helianthus annuus HOM05D001937 ORTHO05D007024 0.0e+00 1815.0 1263 72.1
CiPaw.10G131100 Carya illinoinensis HOM05D001937 ORTHO05D007024 0.0e+00 1814.3 1266 71.5
Cc09_g08410 Coffea canephora HOM05D001937 ORTHO05D007024 0.0e+00 1812.7 1266 71.3
VMungo0251G0821 Vigna mungo HOM05D001937 ORTHO05D007024 0.0e+00 1812.7 1268 71.5
CANSAT01G0692 Cannabis sativa HOM05D001937 ORTHO05D007024 0.0e+00 1812.0 1266 71.0
ECA233G4596 Erigeron canadensis HOM05D001937 ORTHO05D007024 0.0e+00 1810.4 1258 72.1
Nn2g12806 Nelumbo nucifera HOM05D001937 ORTHO05D007024 0.0e+00 1810.0 1255 71.8
Os01g0966000 Oryza sativa ssp. japonica HOM05D001937 ORTHO05D007024 0.0e+00 1810.0 1268 71.7
PGR142G3997 Punica granatum HOM05D001937 ORTHO05D007024 0.0e+00 1808.9 1265 71.2
Cpa.g.sc41.77 Carica papaya HOM05D001937 ORTHO05D007024 0.0e+00 1808.5 1270 71.0
PSO478G1455 Papaver somniferum HOM05D001937 ORTHO05D007024 0.0e+00 1808.5 1266 71.5
Rhsim09G0056700 Rhododendron simsii HOM05D001937 ORTHO05D007024 0.0e+00 1808.5 1264 71.1
arahy.Tifrunner.gnm1.ann1.EYG9NG Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 1807.3 1274 70.5
FAN01G0178 Fragaria x ananassa HOM05D001937 ORTHO05D007024 0.0e+00 1807.0 1262 71.9
Sed0024188 Sechium edule HOM05D001937 ORTHO05D007024 0.0e+00 1805.0 1276 70.4
Zm00001eb021240 Zea mays HOM05D001937 ORTHO05D007024 0.0e+00 1802.3 1268 71.4
BcaB02g08024 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 1799.3 1266 70.6
ClCG05G003000 Citrullus lanatus HOM05D001937 ORTHO05D007024 0.0e+00 1798.1 1262 70.8
MSTRG.3701 Avicennia marina HOM05D001937 ORTHO05D007024 0.0e+00 1797.3 1269 70.4
unitig_0.g658 Utricularia gibba HOM05D001937 ORTHO05D007024 0.0e+00 1796.6 1272 69.9
TPR.G2837 Trifolium pratense HOM05D001937 ORTHO05D007024 0.0e+00 1787.7 1268 70.6
Actinidia06125 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1771.5 1239 70.5
ATR0559G369 Amborella trichopoda HOM05D001937 ORTHO05D007024 0.0e+00 1762.7 1263 69.8
Dinv02213 Davidia involucrata HOM05D001937 ORTHO05D007024 0.0e+00 1762.3 1217 72.3
arahy.Tifrunner.gnm1.ann1.TT5FZ7 Arachis hypogaea HOM05D001937 ORTHO05D007024 0.0e+00 1748.8 1270 68.2
Lalb_Chr05g0217681 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1745.3 1268 69.0
Peaxi162Scf00165g01826 Petunia axillaris HOM05D001937 ORTHO05D007024 0.0e+00 1693.7 1274 66.6
Aqoxy2G01407 Aquilegia oxysepala HOM05D001937 ORTHO05D007024 0.0e+00 1680.6 1158 71.8
SHI12658 Sapria himalayana HOM05D001937 ORTHO05D007024 0.0e+00 1677.9 1279 65.8
CDE04G1916 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1647.1 1276 65.2
CDE07G0097 Ceratophyllum demersum HOM05D001937 ORTHO05D007024 0.0e+00 1608.6 1204 67.2
Pp3c19_22940 Physcomitrium patens HOM05D001937 ORTHO05D007024 0.0e+00 1608.2 1046 76.9
MCO14G182 Micromonas commoda HOM05D001937 ORTHO05D007024 0.0e+00 1605.1 1316 64.0
SGA_v2.0_scaffold14G07136 Striga asiatica HOM05D001937 ORTHO05D007024 0.0e+00 1560.8 1125 70.3
BcaC08g44352 Brassica carinata HOM05D001937 ORTHO05D007024 0.0e+00 1560.0 1077 71.6
Psat7g100640 Pisum sativum HOM05D001937 ORTHO05D007024 0.0e+00 1549.3 1090 71.2
Nitab4.5_0004091g0060 Nicotiana tabacum HOM05D001937 ORTHO05D007024 0.0e+00 1490.7 1275 61.3
Actinidia11252 Actinidia chinensis HOM05D001937 ORTHO05D007024 0.0e+00 1462.2 1266 59.7
Lalb_Chr16g0382831 Lupinus albus HOM05D001937 ORTHO05D007024 0.0e+00 1372.1 971 69.6
Cre07.g325748 Chlamydomonas reinhardtii HOM05D001937 ORTHO05D007024 0.0e+00 1345.1 1403 53.5
Cfa025426 Carpinus fangiana HOM05D001937 ORTHO05D007024 0.0e+00 1308.9 1343 54.0
Oeu029564.1 Olea europaea HOM05D001937 ORTHO05D007024 0.0e+00 1159.8 822 69.7
GSVIVG01034203001 Vitis vinifera HOM05D001937 ORTHO05D007024 0.0e+00 1138.6 1270 51.1
TAR636G0878 Trochodendron aralioides HOM05D001937 ORTHO05D007024 6.2e-300 1034.6 734 71.0
VMungo0251G0025 Vigna mungo HOM05D001937 ORTHO05D007024 1.2e-287 993.8 1109 52.1
Dinv02208 Davidia involucrata HOM05D001937 ORTHO05D007024 1.6e-258 897.1 804 58.3
PRCOL_00004137 Prasinoderma coloniale HOM05D001937 ORTHO05D007024 1.5e-253 880.6 1253 41.3
CBR_g26054 Chara braunii HOM05D000019 ORTHO05D000002 2.2e-236 823.5 692 63.0
Dinv10935 Davidia involucrata HOM05D001937 ORTHO05D007024 3.4e-229 799.7 577 70.9
TAR636G1691 Trochodendron aralioides HOM05D001937 ORTHO05D007024 6.8e-214 748.8 493 73.8
MD02G1239500 Malus domestica HOM05D001937 ORTHO05D007024 4.8e-191 672.9 528 66.7
TAR636G2433 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.3e-159 568.5 461 65.3
TAR636G1243 Trochodendron aralioides HOM05D001937 ORTHO05D007024 1.7e-159 568.2 389 74.0
CBR_g26059 Chara braunii HOM05D001937 ORTHO05D007024 1.4e-129 468.8 359 67.4
Potri.017G124400 Populus trichocarpa HOM05D001937 ORTHO05D007024 9.5e-99 366.3 311 65.0
Lalb_Chr16g0382841 Lupinus albus HOM05D001937 ORTHO05D007024 6.9e-89 333.6 261 66.7
SalBow2G0807 Salvia bowleyana HOM05D001937 ORTHO05D007024 6.0e-61 240.7 161 72.0
SalBow1G2752 Salvia bowleyana HOM05D001937 ORTHO05D007024 4.3e-59 234.6 161 70.8
Oeu061583.3 Olea europaea HOM05D001937 ORTHO05D007024 7.4e-59 233.8 478 35.1
HPP92_019823 Vanilla planifolia HOM05D001937 ORTHO05D007024 9.7e-59 233.4 145 78.6
SalBow1G1280 Salvia bowleyana HOM05D001937 ORTHO05D007024 1.6e-58 232.6 161 70.2
ECA234G0635 Erigeron canadensis HOM05D001937 ORTHO05D007024 6.9e-49 200.7 234 49.6
TAR636G3286 Trochodendron aralioides HOM05D001937 ORTHO05D043971 5.2e-36 157.9 115 71.3
HPP92_019822 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.3e-34 153.3 153 58.2
TAR636G2347 Trochodendron aralioides HOM05D001937 ORTHO05D007024 8.2e-34 150.6 90 72.2
ECA234G4540 Erigeron canadensis HOM05D016619 ORTHO05D007024 4.5e-32 144.8 182 49.5
CBR_g39219 Chara braunii HOM05D001937 ORTHO05D043971 2.8e-26 125.6 98 62.2
HPP92_019824 Vanilla planifolia HOM05D001937 ORTHO05D007024 1.4e-20 106.7 97 58.8


User provided reference genes

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