Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO147G0228 Selaginella moellendorffii HOM05D005985 ORTHO05D007403 5.8e-129 464.2 222 100.0
Pp3c10_21340 Physcomitrium patens HOM05D005985 ORTHO05D007403 2.0e-89 332.8 221 67.0
SEGI_03003 Sequoiadendron giganteum HOM05D005985 ORTHO05D007403 4.5e-89 331.6 222 67.1
AagrBONN_evm.TU.Sc2ySwM_117.1081 Anthoceros agrestis HOM05D005985 ORTHO05D007403 2.5e-87 325.9 222 65.3
Mapoly0042s0090 Marchantia polymorpha HOM05D005985 ORTHO05D007403 3.2e-87 325.5 222 65.3
Pp3c20_21100 Physcomitrium patens HOM05D005985 ORTHO05D007403 1.2e-86 323.6 221 65.2
AagrBONN_evm.TU.Sc2ySwM_228.1273 Anthoceros agrestis HOM05D005985 ORTHO05D007403 7.2e-79 297.7 220 60.9
TWI09G1588 Tripterygium wilfordii HOM05D005985 ORTHO05D007403 2.0e-73 279.6 213 56.8
PRCOL_00004927 Prasinoderma coloniale HOM05D005985 ORTHO05D007403 2.7e-73 279.3 221 56.6
ClCG05G006800 Citrullus lanatus HOM05D005985 ORTHO05D007403 1.7e-72 276.6 213 57.3
QL06p013713 Quercus lobata HOM05D005985 ORTHO05D007403 1.1e-71 273.9 216 55.6
CANSAT78G1051 Cannabis sativa HOM05D005985 ORTHO05D007403 1.9e-71 273.1 216 53.2
Gohir.D10G182600 Gossypium hirsutum HOM05D005985 ORTHO05D007403 1.9e-71 273.1 213 53.5
Haze_00800 Corylus avellana HOM05D005985 ORTHO05D007403 2.5e-71 272.7 213 54.9
Gorai.011G204600 Gossypium raimondii HOM05D005985 ORTHO05D007403 2.5e-71 272.7 213 53.1
SEGI_14508 Sequoiadendron giganteum HOM05D005985 ORTHO05D007403 3.2e-71 272.3 213 54.0
MBI18_g28902_MAGBIO Magnolia biondii HOM05D005985 ORTHO05D007403 9.4e-71 270.8 213 54.9
arahy.Tifrunner.gnm1.ann1.7BH383 Arachis hypogaea HOM05D005985 ORTHO05D007403 1.2e-70 270.4 216 52.3
arahy.Tifrunner.gnm1.ann1.BM2Q5K Arachis hypogaea HOM05D005985 ORTHO05D007403 1.2e-70 270.4 216 52.3
Eucgr.G02036 Eucalyptus grandis HOM05D005985 ORTHO05D007403 1.2e-70 270.4 213 53.5
Gohir.A10G176000 Gossypium hirsutum HOM05D005985 ORTHO05D007403 2.1e-70 269.6 213 51.6
CsaV3_3G015450 Cucumis sativus L. HOM05D005985 ORTHO05D007403 4.7e-70 268.5 213 54.0
ATR0796G055 Amborella trichopoda HOM05D005985 ORTHO05D007403 6.1e-70 268.1 216 52.3
Cfa015714 Carpinus fangiana HOM05D005985 ORTHO05D007403 8.0e-70 267.7 214 55.1
Potri.008G099900 Populus trichocarpa HOM05D005985 ORTHO05D007403 1.4e-69 266.9 213 55.4
Glyma.08G088000 Glycine max HOM05D005985 ORTHO05D007403 3.0e-69 265.8 216 53.7
Dinv29531 Davidia involucrata HOM05D005985 ORTHO05D007403 4.0e-69 265.4 213 53.1
Nn3g21870 Nelumbo nucifera HOM05D005985 ORTHO05D007403 4.0e-69 265.4 213 53.1
Atru.chr4.3125 Acer truncatum HOM05D005985 ORTHO05D007403 1.5e-68 263.5 213 52.6
GSVIVG01017666001 Vitis vinifera HOM05D005985 ORTHO05D007403 1.5e-68 263.5 216 52.3
PSO144G0010 Papaver somniferum HOM05D005985 ORTHO05D007403 2.6e-68 262.7 213 52.6
SMO367G0796 Selaginella moellendorffii HOM05D005985 ORTHO05D007403 2.6e-68 262.7 216 50.5
Solyc03g096040.3 Solanum lycopersicum HOM05D005985 ORTHO05D007403 5.7e-68 261.5 213 53.1
Os07g0638300 Oryza sativa ssp. japonica HOM05D005985 ORTHO05D007403 7.5e-68 261.2 216 51.4
Sopen03g026120 Solanum pennellii HOM05D005985 ORTHO05D007403 7.5e-68 261.2 213 53.1
Lalb_Chr07g0188301 Lupinus albus HOM05D005985 ORTHO05D007403 9.8e-68 260.8 216 52.3
EL10Ac3g06274 Beta vulgaris HOM05D005985 ORTHO05D007403 1.3e-67 260.4 216 51.4
Mapoly0057s0102 Marchantia polymorpha HOM05D005985 ORTHO05D007403 1.3e-67 260.4 216 53.2
Nitab4.5_0000204g0010 Nicotiana tabacum HOM05D005985 ORTHO05D007403 1.3e-67 260.4 214 52.8
Sc24g0001290 Simmondsia chinensis HOM05D005985 ORTHO05D007403 1.3e-67 260.4 216 51.4
Manes.15G003600 Manihot esculenta HOM05D005985 ORTHO05D007403 1.7e-67 260.0 214 53.7
PSO210G5602 Papaver somniferum HOM05D005985 ORTHO05D007403 1.7e-67 260.0 213 52.1
Phvul.002G189300 Phaseolus vulgaris HOM05D005985 ORTHO05D007403 1.7e-67 260.0 216 52.3
PGSC0003DMG400027720 Solanum tuberosum HOM05D005985 ORTHO05D007403 1.7e-67 260.0 213 53.1
PSO761G0261 Papaver somniferum HOM05D005985 ORTHO05D007403 2.2e-67 259.6 213 52.1
Peaxi162Scf00103g01922 Petunia axillaris HOM05D005985 ORTHO05D007403 2.2e-67 259.6 213 51.2
Sabra08G0075600 Salix brachista HOM05D005985 ORTHO05D007403 2.2e-67 259.6 213 54.0
Pp3c22_8470 Physcomitrium patens HOM05D005985 ORTHO05D007403 3.7e-67 258.8 214 52.3
MELO3C006744.2 Cucumis melo HOM05D005985 ORTHO05D007403 4.8e-67 258.5 230 49.6
HPP92_020535 Vanilla planifolia HOM05D005985 ORTHO05D007403 4.8e-67 258.5 213 52.6
AUR62029991 Chenopodium quinoa HOM05D005985 ORTHO05D007403 8.3e-67 257.7 216 50.0
MD13G1144500 Malus domestica HOM05D005985 ORTHO05D007403 8.3e-67 257.7 216 51.9
Manes.03G210400 Manihot esculenta HOM05D005985 ORTHO05D007403 8.3e-67 257.7 214 52.8
Nitab4.5_0000781g0010 Nicotiana tabacum HOM05D005985 ORTHO05D007403 8.3e-67 257.7 213 53.5
VMungo0251G0059 Vigna mungo HOM05D005985 ORTHO05D007403 1.1e-66 257.3 213 52.6
RcHm_v2.0_Chr4g0426681 Rosa chinensis HOM05D005985 ORTHO05D007403 1.4e-66 256.9 213 53.1
Actinidia02521 Actinidia chinensis HOM05D005985 ORTHO05D007403 1.8e-66 256.5 215 53.0
CDE02G0842 Ceratophyllum demersum HOM05D005985 ORTHO05D007403 1.8e-66 256.5 213 52.1
Psat7g085840 Pisum sativum HOM05D005985 ORTHO05D007403 2.4e-66 256.1 213 50.2
Ca_18238_v3 Cicer arietinum L. HOM05D005985 ORTHO05D007403 3.1e-66 255.8 213 50.7
Medtr4g094720 Medicago truncatula HOM05D005985 ORTHO05D007403 3.1e-66 255.8 213 49.8
Prupe.1G109000 Prunus persica HOM05D005985 ORTHO05D007403 3.1e-66 255.8 214 51.9
THA.LOC104821806 Tarenaya hassleriana HOM05D005985 ORTHO05D007403 3.1e-66 255.8 213 50.2
ECA233G5395 Erigeron canadensis HOM05D005985 ORTHO05D007403 4.1e-66 255.4 213 51.6
HanXRQChr07g0194341 Helianthus annuus HOM05D005985 ORTHO05D007403 4.1e-66 255.4 213 50.7
Lj4g0025954 Lotus japonicus HOM05D005985 ORTHO05D007403 4.1e-66 255.4 216 51.4
AUR62002570 Chenopodium quinoa HOM05D005985 ORTHO05D007403 5.4e-66 255.0 216 50.0
TPR.G31247 Trifolium pratense HOM05D005985 ORTHO05D007403 5.4e-66 255.0 213 49.8
PGR031G1426 Punica granatum HOM05D005985 ORTHO05D007403 7.0e-66 254.6 216 49.5
DCAR_023383 Daucus carota HOM05D005985 ORTHO05D007403 1.2e-65 253.8 215 51.6
Duzib128G0500 Durio zibethinus HOM05D005985 ORTHO05D007403 2.7e-65 252.7 213 49.8
FAN17G1815 Fragaria x ananassa HOM05D005985 ORTHO05D007403 2.7e-65 252.7 213 52.1
CSS0012631 Camellia sinensis var. sinensis HOM05D005985 ORTHO05D007403 3.5e-65 252.3 222 50.9
Duzib128G2054 Durio zibethinus HOM05D005985 ORTHO05D007403 3.5e-65 252.3 213 49.8
Duzib212G0534 Durio zibethinus HOM05D005985 ORTHO05D007403 4.5e-65 251.9 213 49.8
SalBow8G2871 Salvia bowleyana HOM05D005985 ORTHO05D007403 4.5e-65 251.9 213 52.6
SGA_v2.0_scaffold64G22045 Striga asiatica HOM05D005985 ORTHO05D007403 4.5e-65 251.9 213 51.2
Lsat_1_v5_gn_6_69481 Lactuca sativa HOM05D005985 ORTHO05D007403 1.3e-64 250.4 213 50.2
Lj6A699T60 Lonicera japonica HOM05D005985 ORTHO05D007403 2.2e-64 249.6 213 50.7
AL1G54700 Arabidopsis lyrata HOM05D005985 ORTHO05D007403 2.9e-64 249.2 215 48.8
Aqoxy2G02563 Aquilegia oxysepala HOM05D005985 ORTHO05D007403 5.0e-64 248.4 213 51.6
FvH4_4g21120 Fragaria vesca HOM05D005985 ORTHO05D007403 8.5e-64 247.7 209 52.6
TAR362G0466 Trochodendron aralioides HOM05D005985 ORTHO05D007403 8.5e-64 247.7 239 47.3
Ciclev10007138m.g Citrus clementina HOM05D005985 ORTHO05D007403 1.1e-63 247.3 210 51.9
Zm00001eb328770 Zea mays HOM05D005985 ORTHO05D007403 1.1e-63 247.3 226 49.1
Oeu020283.1 Olea europaea HOM05D005985 ORTHO05D007403 1.5e-63 246.9 213 50.7
Os07g0638400 Oryza sativa ssp. japonica HOM05D005985 ORTHO05D007403 1.5e-63 246.9 216 48.6
Sp1g35100 Schrenkiella parvula HOM05D005985 ORTHO05D007403 1.5e-63 246.9 218 47.7
CARHR037770 Cardamine hirsuta HOM05D005985 ORTHO05D007403 2.5e-63 246.1 218 46.8
Cpa.g.sc146.45 Carica papaya HOM05D005985 ORTHO05D007403 4.2e-63 245.4 218 46.3
unitig_88.g27789 Utricularia gibba HOM05D000412 ORTHO05D007403 5.5e-63 245.0 213 49.3
Aa31LG10G5610 Aethionema arabicum HOM05D005985 ORTHO05D007403 1.2e-62 243.8 217 48.8
Carub.0001s3723 Capsella rubella HOM05D005985 ORTHO05D007403 1.2e-62 243.8 218 47.2
AT1G48130 Arabidopsis thaliana HOM05D005985 ORTHO05D007403 2.1e-62 243.0 218 47.2
Thhalv10012121m.g Eutrema salsugineum HOM05D005985 ORTHO05D007403 2.1e-62 243.0 218 46.3
BolC6t37315H Brassica oleracea HOM05D005985 ORTHO05D007403 4.7e-62 241.9 218 46.3
BcaC05g27595 Brassica carinata HOM05D005985 ORTHO05D007403 1.8e-61 240.0 218 45.4
A05p21210 Brassica napus HOM05D005985 ORTHO05D007403 2.3e-61 239.6 218 45.4
AagrBONN_evm.TU.Sc2ySwM_228.1443 Anthoceros agrestis HOM05D005985 ORTHO05D007403 3.0e-61 239.2 212 48.1
BcaB02g10720 Brassica carinata HOM05D005985 ORTHO05D007403 5.2e-61 238.4 218 45.4
C05p35800 Brassica napus HOM05D005985 ORTHO05D007403 8.8e-61 237.7 218 45.0
AagrBONN_evm.TU.Sc2ySwM_344.4472 Anthoceros agrestis HOM05D005985 ORTHO05D007403 1.2e-60 237.3 210 53.3
BolC5t32296H Brassica oleracea HOM05D005985 ORTHO05D007403 2.6e-60 236.1 218 45.0
CBR_g8949 Chara braunii HOM05D005985 ORTHO05D007403 2.2e-59 233.0 215 49.3
Nn4g25416 Nelumbo nucifera HOM05D005985 ORTHO05D007403 4.9e-59 231.9 293 38.2
Rhsim02G0000600 Rhododendron simsii HOM05D005985 ORTHO05D007403 6.3e-59 231.5 213 49.3
BraA05t21027Z Brassica rapa HOM05D005985 ORTHO05D007403 1.8e-58 229.9 233 42.5
BraA05t20750Z Brassica rapa HOM05D005985 ORTHO05D007403 3.1e-58 229.2 233 42.1
Duzib212G0439 Durio zibethinus HOM05D005985 ORTHO05D007403 9.2e-58 227.6 211 46.9
Migut.O00392 Erythranthe guttata HOM05D005985 ORTHO05D007403 2.0e-57 226.5 217 47.5
Migut.G00012 Erythranthe guttata HOM05D005985 ORTHO05D007403 1.0e-53 214.2 216 46.8
CAN.G546.41 Capsicum annuum HOM05D005985 ORTHO05D007403 2.0e-52 209.9 213 45.1
Cfa026758 Carpinus fangiana HOM05D005985 ORTHO05D007403 1.8e-50 203.4 221 44.3
COL.COLO4_34540 Corchorus olitorius HOM05D005985 ORTHO05D007403 2.3e-48 196.4 163 50.3
Haze_27189 Corylus avellana HOM05D005985 ORTHO05D007403 1.7e-43 180.3 213 41.3
Thecc.04G309900 Theobroma cacao HOM05D005985 ORTHO05D007403 1.3e-35 154.1 126 52.4
Glyma.05G133500 Glycine max HOM05D005985 ORTHO05D007403 1.2e-30 137.5 104 52.9
GSVIVG01034909001 Vitis vinifera HOM05D005985 ORTHO05D007403 7.6e-28 128.3 117 48.7
Glyma.05G133466 Glycine max HOM05D005985 ORTHO05D007403 9.9e-28 127.9 107 55.1
C06p21300 Brassica napus HOM05D005985 ORTHO05D007403 1.1e-23 114.4 85 50.6
MD16G1139600 Malus domestica HOM05D005985 ORTHO05D007403 7.3e-23 111.7 178 35.4
Nn1g05419 Nelumbo nucifera HOM05D005985 ORTHO05D007403 1.6e-22 110.5 86 50.0
Nn1g05808 Nelumbo nucifera HOM05D005985 ORTHO05D007403 1.2e-20 104.4 86 51.2
PRCOL_00005818 Prasinoderma coloniale HOM05D003127 ORTHO05D003709 5.8e-20 102.1 180 30.6
GSVIVG01017665001 Vitis vinifera HOM05D005985 ORTHO05D007403 8.4e-19 98.2 98 43.9
Gohir.A04G061100 Gossypium hirsutum HOM05D003127 ORTHO05D003709 2.4e-18 96.7 184 28.3
Cre02.g114600 Chlamydomonas reinhardtii HOM05D003127 ORTHO05D003709 7.1e-18 95.1 192 30.7
Gorai.001G249700 Gossypium raimondii HOM05D005985 ORTHO05D007403 2.7e-17 93.2 73 49.3
Haze_27581 Corylus avellana HOM05D003127 ORTHO05D003709 2.3e-16 90.1 199 29.1
Gohir.D01G126866 Gossypium hirsutum HOM05D005985 ORTHO05D007403 3.9e-16 89.4 77 46.8
PRCOL_00002734 Prasinoderma coloniale HOM05D003127 ORTHO05D003709 5.1e-16 89.0 228 27.6
Gorai.002G157500 Gossypium raimondii HOM05D005985 ORTHO05D007403 7.3e-15 85.1 77 44.2
CBR_g34275 Chara braunii HOM05D003127 ORTHO05D003709 1.3e-14 84.3 185 25.4
Cc03_g00310 Coffea canephora HOM05D005985 ORTHO05D007403 6.9e-13 78.6 62 56.5
Glyma.19G198200 Glycine max HOM05D003127 ORTHO05D003709 7.1e-10 68.6 117 26.5


User provided reference genes

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