Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO147G0191 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 9.7e-295 1016.1 543 100.0
SMO147G0158 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 7.1e-96 355.5 334 67.4
SMO132G0009 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 1.4e-70 271.6 258 63.6
SMO132G0001 Selaginella moellendorffii HOM05D006965 ORTHO05D008652 2.2e-57 227.6 156 77.6
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 2.3e-33 147.9 204 43.1
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 8.6e-33 146.0 181 44.8
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 8.6e-33 146.0 183 44.3
SMO169G0042 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 3.3e-32 144.1 322 34.5
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 4.3e-32 143.7 191 41.4
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.2e-31 142.1 218 38.1
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 1.6e-31 141.7 212 39.2
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 2.1e-31 141.4 218 38.1
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 2.8e-31 141.0 186 41.4
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 3.6e-31 140.6 220 39.5
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 4.7e-31 140.2 185 42.7
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 1.0e-30 139.0 180 42.2
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 1.4e-30 138.7 221 37.1
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 2.3e-30 137.9 183 42.1
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 2.3e-30 137.9 213 34.7
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 2.3e-30 137.9 191 40.8
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 3.0e-30 137.5 185 40.0
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 3.0e-30 137.5 185 42.2
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 3.0e-30 137.5 186 40.3
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 4.0e-30 137.1 197 39.1
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 5.2e-30 136.7 214 36.9
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 6.8e-30 136.3 182 42.3
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 6.8e-30 136.3 201 38.8
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 1.2e-29 135.6 190 42.1
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 1.2e-29 135.6 190 42.1
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 1.5e-29 135.2 219 37.4
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 1.5e-29 135.2 214 36.9
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 2.0e-29 134.8 185 40.0
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 2.6e-29 134.4 217 36.9
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 3.4e-29 134.0 217 35.5
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 5.7e-29 133.3 194 39.7
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 7.5e-29 132.9 183 41.0
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 7.5e-29 132.9 197 38.6
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 9.8e-29 132.5 219 35.6
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 9.8e-29 132.5 196 39.8
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 1.3e-28 132.1 205 37.1
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 1.3e-28 132.1 203 38.9
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 2.2e-28 131.3 196 38.3
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 2.2e-28 131.3 236 35.6
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 2.9e-28 131.0 192 38.0
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 2.9e-28 131.0 196 37.2
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 3.7e-28 130.6 201 40.3
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 4.9e-28 130.2 180 40.0
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 6.4e-28 129.8 181 40.9
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 6.4e-28 129.8 181 40.9
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 6.4e-28 129.8 181 40.9
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 6.4e-28 129.8 196 37.2
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 8.3e-28 129.4 202 38.6
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 8.3e-28 129.4 236 35.2
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 8.3e-28 129.4 190 38.9
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 1.1e-27 129.0 195 37.9
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 1.1e-27 129.0 181 40.9
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 1.4e-27 128.6 220 35.0
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 1.4e-27 128.6 195 39.5
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 1.8e-27 128.3 217 35.5
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.8e-27 128.3 202 38.6
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 1.8e-27 128.3 212 38.2
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 1.8e-27 128.3 195 39.0
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 2.4e-27 127.9 216 37.0
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 2.4e-27 127.9 190 38.4
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 3.2e-27 127.5 196 38.8
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 5.4e-27 126.7 208 35.1
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 5.4e-27 126.7 208 35.1
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 5.4e-27 126.7 206 37.4
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 5.4e-27 126.7 211 36.5
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 7.0e-27 126.3 190 38.4
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 7.0e-27 126.3 198 37.4
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 7.0e-27 126.3 221 34.8
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 7.0e-27 126.3 175 38.3
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 7.0e-27 126.3 212 36.3
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 9.2e-27 125.9 187 41.2
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 9.2e-27 125.9 213 35.7
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 1.2e-26 125.6 208 36.5
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 2.0e-26 124.8 217 34.1
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 2.0e-26 124.8 210 36.2
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 2.7e-26 124.4 189 39.2
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 2.7e-26 124.4 219 34.7
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 2.7e-26 124.4 221 34.4
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 3.5e-26 124.0 186 39.2
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 3.5e-26 124.0 192 37.0
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 4.6e-26 123.6 199 36.2
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 4.6e-26 123.6 199 36.2
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 4.6e-26 123.6 219 36.5
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 4.6e-26 123.6 203 36.5
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 7.8e-26 122.9 213 34.7
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 7.8e-26 122.9 189 36.0
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 1.3e-25 122.1 183 38.3
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 1.7e-25 121.7 182 36.8
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 3.0e-25 120.9 182 37.4
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 3.0e-25 120.9 227 35.2
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 3.9e-25 120.6 222 35.1
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 6.6e-25 119.8 209 35.9
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 6.6e-25 119.8 210 36.2
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 3.3e-24 117.5 201 36.3
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 3.3e-24 117.5 188 37.2
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 2.8e-23 114.4 189 39.2
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 1.0e-22 112.5 156 37.8
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 4.0e-22 110.5 202 36.1
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 4.9e-20 103.6 198 34.8
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 6.4e-20 103.2 150 40.7
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 3.2e-19 100.9 136 40.4
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 5.4e-19 100.1 144 38.2
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 1.3e-17 95.5 198 28.8
SMO202G0027 Selaginella moellendorffii HOM05D020017 ORTHO05D022314 4.7e-15 87.0 202 34.2
DCAR_029603 Daucus carota HOM05D006965 ORTHO05D008652 1.3e-12 79.0 121 39.7


User provided reference genes

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