Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO147G0155 Selaginella moellendorffii HOM05D007224 ORTHO05D009169 1.6e-97 359.4 180 100.0
Mapoly0039s0075 Marchantia polymorpha HOM05D007224 ORTHO05D009169 3.4e-55 218.8 173 61.3
Pp3c6_15140 Physcomitrium patens HOM05D007224 ORTHO05D009169 2.5e-53 212.6 183 56.3
THA.LOC104799830 Tarenaya hassleriana HOM05D007224 ORTHO05D009169 3.7e-49 198.7 183 53.0
Sp1g33790 Schrenkiella parvula HOM05D007224 ORTHO05D009169 1.4e-48 196.8 181 52.5
Duzib116G0584 Durio zibethinus HOM05D007224 ORTHO05D009169 4.1e-48 195.3 181 52.5
Gohir.D06G023300 Gossypium hirsutum HOM05D007224 ORTHO05D009169 5.3e-48 194.9 182 52.2
TWI56G1112 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 5.3e-48 194.9 182 52.7
A10p07160 Brassica napus HOM05D007224 ORTHO05D009169 7.0e-48 194.5 181 51.9
Gorai.010G028000 Gossypium raimondii HOM05D007224 ORTHO05D009169 7.0e-48 194.5 182 51.6
TWI12G0175 Tripterygium wilfordii HOM05D007224 ORTHO05D009169 7.0e-48 194.5 182 52.2
Thhalv10011734m.g Eutrema salsugineum HOM05D007224 ORTHO05D009169 9.1e-48 194.1 181 52.5
Gohir.A06G026200 Gossypium hirsutum HOM05D007224 ORTHO05D009169 9.1e-48 194.1 182 51.1
GSVIVG01009296001 Vitis vinifera HOM05D007224 ORTHO05D009169 1.2e-47 193.7 182 51.6
CARHR036150 Cardamine hirsuta HOM05D007224 ORTHO05D009169 2.0e-47 193.0 183 51.9
Actinidia10224 Actinidia chinensis HOM05D007224 ORTHO05D009169 2.6e-47 192.6 179 54.2
Carub.0001s3542 Capsella rubella HOM05D007224 ORTHO05D009169 3.5e-47 192.2 184 51.6
Ciclev10002194m.g Citrus clementina HOM05D007224 ORTHO05D009169 3.5e-47 192.2 182 51.1
ATR0739G089 Amborella trichopoda HOM05D007224 ORTHO05D009169 4.5e-47 191.8 178 55.1
BcaC08g42889 Brassica carinata HOM05D007224 ORTHO05D009169 4.5e-47 191.8 181 51.9
CsaV3_2G025920 Cucumis sativus L. HOM05D007224 ORTHO05D009169 5.9e-47 191.4 182 51.6
MELO3C010785.2 Cucumis melo HOM05D007224 ORTHO05D009169 1.7e-46 189.9 182 51.6
AT1G44920 Arabidopsis thaliana HOM05D007224 ORTHO05D009169 2.2e-46 189.5 184 51.1
AL1G52590 Arabidopsis lyrata HOM05D007224 ORTHO05D009169 3.8e-46 188.7 184 51.1
Ah.11g039150 Amaranthus hybridus HOM05D007224 ORTHO05D009169 6.5e-46 188.0 180 52.2
Atru.chr13.874 Acer truncatum HOM05D007224 ORTHO05D009169 8.5e-46 187.6 182 51.1
RcHm_v2.0_Chr6g0310081 Rosa chinensis HOM05D007224 ORTHO05D009169 8.5e-46 187.6 180 52.8
MD08G1077300 Malus domestica HOM05D007224 ORTHO05D009169 1.9e-45 186.4 178 52.2
PSO541G3785 Papaver somniferum HOM05D007224 ORTHO05D009169 2.5e-45 186.0 182 49.5
MSTRG.22207 Avicennia marina HOM05D007224 ORTHO05D009169 5.5e-45 184.9 178 52.2
PSO675G4824 Papaver somniferum HOM05D007224 ORTHO05D009169 5.5e-45 184.9 182 49.5
Zm00001eb056020 Zea mays HOM05D007224 ORTHO05D009169 7.2e-45 184.5 181 51.9
CiPaw.07G171700 Carya illinoinensis HOM05D007224 ORTHO05D009169 1.2e-44 183.7 184 49.5
Ca_06981_v3 Cicer arietinum L. HOM05D007224 ORTHO05D009169 2.1e-44 183.0 182 50.5
CSS0049759 Camellia sinensis var. sinensis HOM05D007224 ORTHO05D009169 2.7e-44 182.6 178 51.1
DCAR_009866 Daucus carota HOM05D007224 ORTHO05D009169 2.7e-44 182.6 171 53.8
Lj5g0004917 Lotus japonicus HOM05D007224 ORTHO05D009169 3.6e-44 182.2 181 51.4
Sc26g0004240 Simmondsia chinensis HOM05D007224 ORTHO05D009169 4.7e-44 181.8 173 50.9
TPR.G13169 Trifolium pratense HOM05D007224 ORTHO05D009169 6.1e-44 181.4 182 50.5
FvH4_2g32650 Fragaria vesca HOM05D007224 ORTHO05D009169 1.4e-43 180.3 178 51.1
HanXRQChr04g0110471 Helianthus annuus HOM05D007224 ORTHO05D009169 1.4e-43 180.3 178 49.4
MD15G1064800 Malus domestica HOM05D007224 ORTHO05D009169 1.8e-43 179.9 178 51.7
PGR083G2708 Punica granatum HOM05D007224 ORTHO05D009169 1.8e-43 179.9 178 50.6
Hund05274 Selenicereus undatus HOM05D007224 ORTHO05D009169 2.3e-43 179.5 182 50.5
HPP92_007712 Vanilla planifolia HOM05D007224 ORTHO05D009169 4.0e-43 178.7 182 48.9
Psat6g017040 Pisum sativum HOM05D007224 ORTHO05D009169 5.2e-43 178.3 182 49.5
BolC6t35243H Brassica oleracea HOM05D007224 ORTHO05D009169 6.7e-43 177.9 199 46.7
BcaB07g33899 Brassica carinata HOM05D007224 ORTHO05D009169 8.8e-43 177.6 181 48.6
CAN.G1239.16 Capsicum annuum HOM05D007224 ORTHO05D009169 1.2e-42 177.2 181 50.3
Solyc04g077500.4 Solanum lycopersicum HOM05D007224 ORTHO05D009169 1.2e-42 177.2 181 50.3
SalBow7G4028 Salvia bowleyana HOM05D007224 ORTHO05D009169 1.5e-42 176.8 178 51.1
CANSAT56G0920 Cannabis sativa HOM05D007224 ORTHO05D009169 2.0e-42 176.4 178 50.0
Sopen04g031100 Solanum pennellii HOM05D007224 ORTHO05D009169 2.0e-42 176.4 181 50.3
C06p01100 Brassica napus HOM05D007224 ORTHO05D009169 4.4e-42 175.3 173 49.7
vmacro21415 Vaccinium macrocarpon HOM05D007224 ORTHO05D009169 7.5e-42 174.5 194 48.5
CDE04G2175 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 9.7e-42 174.1 178 47.2
ClCG08G016710 Citrullus lanatus HOM05D007224 ORTHO05D009169 1.7e-41 173.3 173 49.1
Rhsim06G0064800 Rhododendron simsii HOM05D007224 ORTHO05D009169 2.2e-41 172.9 170 50.6
Lj4A752T19 Lonicera japonica HOM05D007224 ORTHO05D009169 2.8e-41 172.6 178 48.3
Nitab4.5_0001494g0030 Nicotiana tabacum HOM05D007224 ORTHO05D009169 2.8e-41 172.6 181 49.2
PGSC0003DMG400004920 Solanum tuberosum HOM05D007224 ORTHO05D009169 3.7e-41 172.2 181 48.1
Dinv44928 Davidia involucrata HOM05D007224 ORTHO05D009169 8.2e-41 171.0 178 49.4
Cfa013733 Carpinus fangiana HOM05D007224 ORTHO05D009169 1.4e-40 170.2 183 46.4
unitig_52.g17426 Utricularia gibba HOM05D007224 ORTHO05D009169 1.4e-40 170.2 178 48.9
BraA10t42965Z Brassica rapa HOM05D007224 ORTHO05D009169 1.8e-40 169.9 198 44.9
Glyma.17G232300 Glycine max HOM05D007224 ORTHO05D009169 2.4e-40 169.5 182 46.7
Thecc.08G084200 Theobroma cacao HOM05D007224 ORTHO05D009169 2.4e-40 169.5 182 48.4
CBR_g45556 Chara braunii HOM05D000019 ORTHO05D000002 5.3e-40 168.3 179 48.0
Manes.18G049850 Manihot esculenta HOM05D007224 ORTHO05D009169 5.3e-40 168.3 178 48.9
Os03g0729100 Oryza sativa ssp. japonica HOM05D007224 ORTHO05D009169 3.5e-39 165.6 175 49.7
FAN24G0100 Fragaria x ananassa HOM05D007224 ORTHO05D009169 5.9e-39 164.9 175 47.4
Migut.C00453 Erythranthe guttata HOM05D007224 ORTHO05D009169 7.7e-39 164.5 178 48.9
FAN20G0095 Fragaria x ananassa HOM05D007224 ORTHO05D009169 7.7e-39 164.5 178 47.2
EL10Ac1g02348 Beta vulgaris HOM05D007224 ORTHO05D009169 1.0e-38 164.1 181 46.4
Potri.002G114900 Populus trichocarpa HOM05D007224 ORTHO05D009169 1.0e-38 164.1 178 47.8
VMungo0647G2475 Vigna mungo HOM05D007224 ORTHO05D009169 2.2e-38 162.9 178 46.6
FAN15G3290 Fragaria x ananassa HOM05D007224 ORTHO05D009169 3.8e-38 162.2 178 47.2
Nn5g30669 Nelumbo nucifera HOM05D007224 ORTHO05D009169 3.8e-38 162.2 182 45.1
Phvul.001G031100 Phaseolus vulgaris HOM05D007224 ORTHO05D009169 3.8e-38 162.2 175 46.3
Lalb_Chr22g0355811 Lupinus albus HOM05D007224 ORTHO05D009169 5.0e-38 161.8 183 45.9
Medtr1g017450 Medicago truncatula HOM05D007224 ORTHO05D009169 1.1e-37 160.6 175 45.7
FAN27G0962 Fragaria x ananassa HOM05D007224 ORTHO05D009169 1.5e-37 160.2 175 46.9
MBI16_g06074_MAGBIO Magnolia biondii HOM05D007224 ORTHO05D009169 2.5e-37 159.5 171 45.6
arahy.Tifrunner.gnm1.ann1.TQ0B6U Arachis hypogaea HOM05D007224 ORTHO05D009169 9.4e-37 157.5 185 47.0
Prupe.1G418700 Prunus persica HOM05D007224 ORTHO05D009169 9.4e-37 157.5 180 45.6
COL.COLO4_28456 Corchorus olitorius HOM05D007224 ORTHO05D009169 1.2e-36 157.1 188 45.7
Peaxi162Scf01161g00120 Petunia axillaris HOM05D007224 ORTHO05D009169 1.5e-34 150.2 181 43.6
Lsat_1_v5_gn_0_47281 Lactuca sativa HOM05D007224 ORTHO05D009169 2.6e-34 149.4 170 41.2
Aa31LG7G10090 Aethionema arabicum HOM05D007224 ORTHO05D009169 3.4e-34 149.1 203 40.4
ECA232G4225 Erigeron canadensis HOM05D007224 ORTHO05D009169 3.4e-34 149.1 136 50.7
SGA_v2.0_scaffold238G43907 Striga asiatica HOM05D007224 ORTHO05D009169 3.4e-34 149.1 175 45.1
Haze_22381 Corylus avellana HOM05D007224 ORTHO05D009169 7.5e-34 147.9 173 43.4
Cc10_g07670 Coffea canephora HOM05D007224 ORTHO05D009169 9.8e-34 147.5 181 45.3
Aqoxy6G02448 Aquilegia oxysepala HOM05D007224 ORTHO05D009169 1.8e-32 143.3 174 43.7
TAR628G0831 Trochodendron aralioides HOM05D007224 ORTHO05D009169 1.6e-31 140.2 175 40.0
Nitab4.5_0010252g0010 Nicotiana tabacum HOM05D007224 ORTHO05D009169 1.9e-29 133.3 173 42.2
Cre13.g569250 Chlamydomonas reinhardtii HOM05D007224 ORTHO05D009169 2.5e-29 132.9 183 44.3
Sabra02G0090900 Salix brachista HOM05D007224 ORTHO05D009169 1.6e-28 130.2 229 34.9
Actinidia19293 Actinidia chinensis HOM05D007224 ORTHO05D009169 8.0e-28 127.9 118 54.2
arahy.Tifrunner.gnm1.ann1.XZQ8AB Arachis hypogaea HOM05D007224 ORTHO05D009169 8.0e-28 127.9 160 43.1
CDE07G0245 Ceratophyllum demersum HOM05D007224 ORTHO05D009169 2.8e-25 119.4 168 36.9
Sed0020426 Sechium edule HOM05D007224 ORTHO05D009169 3.7e-25 119.0 115 53.9
MCO05G240 Micromonas commoda HOM05D007224 ORTHO05D009169 1.1e-21 107.5 181 39.8
AUR62024535 Chenopodium quinoa HOM05D007224 ORTHO05D009169 4.4e-18 95.5 89 50.6
Haze_22389 Corylus avellana HOM05D007224 ORTHO05D009169 9.8e-18 94.4 113 45.1
Glyma.14G089100 Glycine max HOM05D007224 ORTHO05D009169 2.4e-16 89.7 89 47.2
AUR62033890 Chenopodium quinoa HOM05D007224 ORTHO05D009169 7.0e-16 88.2 74 55.4
Zm00001eb035950 Zea mays HOM05D007224 ORTHO05D009169 4.6e-15 85.5 76 52.6
Cpa.g.sc2059.2 Carica papaya HOM05D007224 ORTHO05D009169 3.7e-09 65.9 72 50.0
Zm00001eb141580 Zea mays HOM05D007224 ORTHO05D445531 1.6e-07 60.5 121 35.5


User provided reference genes

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