Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO147G0093 Selaginella moellendorffii HOM05D001594 ORTHO05D037554 3.0e-49 198.4 111 100.0
SMO132G0007 Selaginella moellendorffii HOM05D001594 ORTHO05D037554 1.8e-38 162.5 109 85.3
SMO147G0368 Selaginella moellendorffii HOM05D001594 ORTHO05D037554 2.2e-36 155.6 110 80.0
arahy.Tifrunner.gnm1.ann1.XZA3Z3 Arachis hypogaea HOM05D001594 ORTHO05D002862 8.8e-09 63.9 81 46.9
Rhsim05G0216900 Rhododendron simsii HOM05D001594 ORTHO05D002862 1.1e-08 63.5 76 50.0
THA.LOC104826848 Tarenaya hassleriana HOM05D001594 ORTHO05D002862 1.5e-08 63.2 97 43.3
Sabra08G0051300 Salix brachista HOM05D001594 ORTHO05D002862 1.9e-08 62.8 74 50.0
THA.LOC104823185 Tarenaya hassleriana HOM05D001594 ORTHO05D002862 3.3e-08 62.0 97 42.3
COL.COLO4_25745 Corchorus olitorius HOM05D001594 ORTHO05D002862 4.3e-08 61.6 94 42.6
Duzib128G1282 Durio zibethinus HOM05D001594 ORTHO05D002862 5.7e-08 61.2 99 41.4
vmacro20290 Vaccinium macrocarpon HOM05D001594 ORTHO05D002862 7.4e-08 60.8 76 47.4
Duzib093G0392 Durio zibethinus HOM05D001594 ORTHO05D002862 9.7e-08 60.5 74 50.0
Lj1g0012009 Lotus japonicus HOM05D001594 ORTHO05D002862 9.7e-08 60.5 91 41.8
Manes.08G093100 Manihot esculenta HOM05D001594 ORTHO05D002862 9.7e-08 60.5 93 44.1
TPR.G20368 Trifolium pratense HOM05D001594 ORTHO05D002862 9.7e-08 60.5 80 46.2
Dinv21741 Davidia involucrata HOM05D001594 ORTHO05D002862 1.3e-07 60.1 75 46.7
Thecc.05G014100 Theobroma cacao HOM05D001594 ORTHO05D002862 1.7e-07 59.7 96 43.8
Manes.10G011200 Manihot esculenta HOM05D001594 ORTHO05D002862 2.2e-07 59.3 74 48.6
Psat3g127240 Pisum sativum HOM05D001594 ORTHO05D002862 2.2e-07 59.3 76 47.4
COL.COLO4_14516 Corchorus olitorius HOM05D001594 ORTHO05D002862 2.8e-07 58.9 96 43.8
Potri.008G069700 Populus trichocarpa HOM05D001594 ORTHO05D002862 2.8e-07 58.9 74 47.3
Potri.010G187700 Populus trichocarpa HOM05D001594 ORTHO05D002862 2.8e-07 58.9 74 45.9
EL10Ac2g04845 Beta vulgaris HOM05D001594 ORTHO05D002862 3.7e-07 58.5 94 42.6
Potri.016G117800 Populus trichocarpa HOM05D001594 ORTHO05D002862 3.7e-07 58.5 97 41.2
MELO3C026791.2 Cucumis melo HOM05D001594 ORTHO05D002862 4.8e-07 58.2 98 38.8
Duzib106G0141 Durio zibethinus HOM05D001594 ORTHO05D002862 4.8e-07 58.2 97 43.3
Gohir.A05G329933 Gossypium hirsutum HOM05D001594 ORTHO05D002862 4.8e-07 58.2 90 44.4
Glyma.18G202700 Glycine max HOM05D001594 ORTHO05D002862 6.3e-07 57.8 110 40.9
HanXRQChr10g0294031 Helianthus annuus HOM05D001594 ORTHO05D002862 6.3e-07 57.8 76 47.4
CsaV3_5G010240 Cucumis sativus L. HOM05D001594 ORTHO05D002862 8.2e-07 57.4 97 39.2
Lsat_1_v5_gn_9_35340 Lactuca sativa HOM05D001594 ORTHO05D002862 8.2e-07 57.4 74 48.6
Phvul.008G098000 Phaseolus vulgaris HOM05D001594 ORTHO05D002862 8.2e-07 57.4 100 40.0
TWI74G0921 Tripterygium wilfordii HOM05D001594 ORTHO05D002862 8.2e-07 57.4 96 41.7
VMungo1383G3732 Vigna mungo HOM05D001594 ORTHO05D002862 8.2e-07 57.4 100 40.0
CiPaw.02G193300 Carya illinoinensis HOM05D001594 ORTHO05D002862 1.4e-06 56.6 93 41.9
AUR62022896 Chenopodium quinoa HOM05D001594 ORTHO05D002862 1.4e-06 56.6 101 38.6
Gohir.D04G068000 Gossypium hirsutum HOM05D001594 ORTHO05D002862 1.8e-06 56.2 90 43.3
Gorai.012G077100 Gossypium raimondii HOM05D001594 ORTHO05D002862 1.8e-06 56.2 90 43.3
Lsat_1_v5_gn_8_11660 Lactuca sativa HOM05D001594 ORTHO05D002862 1.8e-06 56.2 87 42.5
unitig_0.g243 Utricularia gibba HOM05D001594 ORTHO05D002862 1.8e-06 56.2 75 46.7
GSVIVG01032802001 Vitis vinifera HOM05D001594 ORTHO05D002862 1.8e-06 56.2 104 39.4
Ca_26556_v3 Cicer arietinum L. HOM05D001594 ORTHO05D002862 2.4e-06 55.8 76 46.1
Gohir.A04G092000 Gossypium hirsutum HOM05D001594 ORTHO05D002862 2.4e-06 55.8 97 43.3
RcHm_v2.0_Chr1g0370431 Rosa chinensis HOM05D001594 ORTHO05D002862 2.4e-06 55.8 91 41.8
ClCG07G004300 Citrullus lanatus HOM05D001594 ORTHO05D002862 3.1e-06 55.5 97 38.1
Dinv05667 Davidia involucrata HOM05D001594 ORTHO05D002862 3.1e-06 55.5 75 46.7
Lalb_Chr04g0250541 Lupinus albus HOM05D001594 ORTHO05D002862 3.1e-06 55.5 75 44.0
Sed0018377 Sechium edule HOM05D001594 ORTHO05D002862 3.1e-06 55.5 89 41.6
SMO115G0087 Selaginella moellendorffii HOM05D001594 ORTHO05D002862 3.1e-06 55.5 80 45.0
Haze_21018 Corylus avellana HOM05D001594 ORTHO05D002862 4.1e-06 55.1 94 41.5
Hma1.2p1_0523F.1_g172240 Hydrangea macrophylla HOM05D001594 ORTHO05D002862 4.1e-06 55.1 97 38.1
Nitab4.5_0005018g0040 Nicotiana tabacum HOM05D001594 ORTHO05D002862 4.1e-06 55.1 75 48.0
Nitab4.5_0012190g0010 Nicotiana tabacum HOM05D001594 ORTHO05D002862 4.1e-06 55.1 75 48.0
Rhsim03G0144700 Rhododendron simsii HOM05D001594 ORTHO05D002862 4.1e-06 55.1 98 41.8
TWI09G1043 Tripterygium wilfordii HOM05D001594 ORTHO05D002862 4.1e-06 55.1 96 39.6
vmacro06960 Vaccinium macrocarpon HOM05D001594 ORTHO05D002862 4.1e-06 55.1 75 46.7
GSVIVG01011173001 Vitis vinifera HOM05D001594 ORTHO05D002862 4.1e-06 55.1 99 41.4
AUR62012263 Chenopodium quinoa HOM05D001594 ORTHO05D002862 5.3e-06 54.7 105 40.0
Gohir.D04G131200 Gossypium hirsutum HOM05D001594 ORTHO05D002862 5.3e-06 54.7 105 41.0
Lalb_Chr03g0043221 Lupinus albus HOM05D001594 ORTHO05D002862 5.3e-06 54.7 99 42.4
Nitab4.5_0000261g0050 Nicotiana tabacum HOM05D001594 ORTHO05D002862 5.3e-06 54.7 78 44.9
PGR031G3904 Punica granatum HOM05D001594 ORTHO05D002862 5.3e-06 54.7 75 48.0
VMungo0647G1485 Vigna mungo HOM05D001594 ORTHO05D002862 5.3e-06 54.7 77 42.9
MSTRG.8337 Avicennia marina HOM05D001594 ORTHO05D002862 6.9e-06 54.3 81 40.7
CANSAT56G2210 Cannabis sativa HOM05D001594 ORTHO05D002862 6.9e-06 54.3 76 40.8
HanXRQChr08g0221751 Helianthus annuus HOM05D001594 ORTHO05D002862 6.9e-06 54.3 77 44.2
Medtr7g068810 Medicago truncatula HOM05D001594 ORTHO05D002862 6.9e-06 54.3 100 38.0
Os07g0693700 Oryza sativa ssp. japonica HOM05D001594 ORTHO05D002862 6.9e-06 54.3 74 44.6
TPR.G38423 Trifolium pratense HOM05D001594 ORTHO05D002862 6.9e-06 54.3 77 44.2
TAR623G1719 Trochodendron aralioides HOM05D001594 ORTHO05D002862 6.9e-06 54.3 99 41.4
CSS0047942 Camellia sinensis var. sinensis HOM05D001594 ORTHO05D002862 9.1e-06 53.9 75 42.7
CANSAT35G1569 Cannabis sativa HOM05D001594 ORTHO05D002862 9.1e-06 53.9 97 41.2
Gorai.012G115100 Gossypium raimondii HOM05D001594 ORTHO05D002862 9.1e-06 53.9 97 42.3


User provided reference genes

Program Settings