Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO147G0037 Selaginella moellendorffii HOM05D006025 ORTHO05D008547 7.2e-105 384.0 210 100.0
Hund25274 Selenicereus undatus HOM05D006025 ORTHO05D008547 6.2e-64 248.1 202 60.4
AagrBONN_evm.TU.Sc2ySwM_117.678 Anthoceros agrestis HOM05D006025 ORTHO05D008547 5.2e-63 245.0 198 62.6
Mapoly0001s0092 Marchantia polymorpha HOM05D006025 ORTHO05D008547 3.4e-62 242.3 195 60.0
Ciclev10032129m.g Citrus clementina HOM05D006025 ORTHO05D008547 4.4e-62 241.9 211 58.8
MELO3C012062.2 Cucumis melo HOM05D006025 ORTHO05D008547 7.6e-62 241.1 208 58.7
DCAR_024490 Daucus carota HOM05D006025 ORTHO05D008547 1.3e-61 240.4 210 59.5
AUR62026262 Chenopodium quinoa HOM05D006025 ORTHO05D008547 1.7e-61 240.0 197 58.9
PGR119G0173 Punica granatum HOM05D006025 ORTHO05D008547 1.7e-61 240.0 211 59.2
SEGI_16485 Sequoiadendron giganteum HOM05D006025 ORTHO05D008547 1.7e-61 240.0 195 59.5
QL03p065944 Quercus lobata HOM05D006025 ORTHO05D008547 2.2e-61 239.6 208 60.6
EL10Ac6g13142 Beta vulgaris HOM05D006025 ORTHO05D008547 2.9e-61 239.2 194 58.8
Lj6A795T74 Lonicera japonica HOM05D006025 ORTHO05D008547 2.9e-61 239.2 208 57.7
Cfa009042 Carpinus fangiana HOM05D006025 ORTHO05D008547 4.9e-61 238.4 211 58.8
CsaV3_5G032300 Cucumis sativus L. HOM05D006025 ORTHO05D008547 4.9e-61 238.4 208 57.7
Dinv34195 Davidia involucrata HOM05D006025 ORTHO05D008547 6.4e-61 238.0 211 58.3
MD13G1079600 Malus domestica HOM05D006025 ORTHO05D008547 6.4e-61 238.0 215 57.7
CiPaw.05G140400 Carya illinoinensis HOM05D006025 ORTHO05D008547 8.4e-61 237.7 206 58.7
ClCG05G024630 Citrullus lanatus HOM05D006025 ORTHO05D008547 8.4e-61 237.7 208 57.7
CSS0050443 Camellia sinensis var. sinensis HOM05D006025 ORTHO05D008547 1.1e-60 237.3 189 60.3
COL.COLO4_36182 Corchorus olitorius HOM05D006025 ORTHO05D008547 1.1e-60 237.3 215 56.3
MD16G1079500 Malus domestica HOM05D006025 ORTHO05D008547 1.1e-60 237.3 203 58.1
Sed0022227 Sechium edule HOM05D006025 ORTHO05D008547 1.1e-60 237.3 208 57.7
Manes.05G096000 Manihot esculenta HOM05D006025 ORTHO05D008547 1.4e-60 236.9 211 56.9
Actinidia31175 Actinidia chinensis HOM05D006025 ORTHO05D008547 1.9e-60 236.5 211 56.4
Prupe.1G267200 Prunus persica HOM05D006025 ORTHO05D008547 1.9e-60 236.5 215 55.3
Thecc.02G232800 Theobroma cacao HOM05D006025 ORTHO05D008547 1.9e-60 236.5 202 57.9
TAR481G0011 Trochodendron aralioides HOM05D006025 ORTHO05D008547 1.9e-60 236.5 212 56.6
ATR0665G167 Amborella trichopoda HOM05D006025 ORTHO05D008547 2.4e-60 236.1 206 57.8
Ah.03g132040 Amaranthus hybridus HOM05D006025 ORTHO05D008547 3.2e-60 235.7 203 59.1
FvH4_4g32070 Fragaria vesca HOM05D006025 ORTHO05D008547 4.2e-60 235.3 202 55.9
Nitab4.5_0000679g0100 Nicotiana tabacum HOM05D006025 ORTHO05D008547 4.2e-60 235.3 199 58.3
MBI04_g22196_MAGBIO Magnolia biondii HOM05D006025 ORTHO05D008547 7.1e-60 234.6 195 59.5
AT2G02590 Arabidopsis thaliana HOM05D006025 ORTHO05D008547 9.3e-60 234.2 211 56.9
ECA246G2177 Erigeron canadensis HOM05D006025 ORTHO05D008547 9.3e-60 234.2 190 60.0
FAN12G1990 Fragaria x ananassa HOM05D006025 ORTHO05D008547 1.2e-59 233.8 212 54.7
FAN22G0508 Fragaria x ananassa HOM05D006025 ORTHO05D008547 1.6e-59 233.4 202 55.4
Sabra10G0030400 Salix brachista HOM05D006025 ORTHO05D008547 1.6e-59 233.4 210 56.7
Sc11g0001660 Simmondsia chinensis HOM05D006025 ORTHO05D008547 1.6e-59 233.4 197 57.4
VMungo1215G1908 Vigna mungo HOM05D006025 ORTHO05D008547 1.6e-59 233.4 197 57.4
BolC7t43841H Brassica oleracea HOM05D006025 ORTHO05D008547 2.7e-59 232.6 211 57.3
Migut.E00118 Erythranthe guttata HOM05D006025 ORTHO05D008547 2.7e-59 232.6 205 56.1
Os03g0800500 Oryza sativa ssp. japonica HOM05D006025 ORTHO05D008547 2.7e-59 232.6 207 58.0
Carub.0005s0158 Capsella rubella HOM05D006025 ORTHO05D008547 3.5e-59 232.3 211 56.9
FAN07G0827 Fragaria x ananassa HOM05D006025 ORTHO05D008547 4.6e-59 231.9 206 56.3
THA.LOC104805137 Tarenaya hassleriana HOM05D000131 ORTHO05D000086 6.0e-59 231.5 211 56.9
TWI18G0579 Tripterygium wilfordii HOM05D006025 ORTHO05D008547 6.0e-59 231.5 205 56.6
Gohir.D05G323300 Gossypium hirsutum HOM05D006025 ORTHO05D008547 7.8e-59 231.1 209 56.5
HanXRQChr15g0478181 Helianthus annuus HOM05D006025 ORTHO05D008547 7.8e-59 231.1 196 57.7
CAN.G27.7 Capsicum annuum HOM05D006025 ORTHO05D008547 1.0e-58 230.7 201 56.7
Lalb_Chr05g0217521 Lupinus albus HOM05D006025 ORTHO05D008547 1.0e-58 230.7 197 56.9
Nn4g23031 Nelumbo nucifera HOM05D006025 ORTHO05D008547 1.0e-58 230.7 204 56.4
Sp2g13810 Schrenkiella parvula HOM05D006025 ORTHO05D008547 1.0e-58 230.7 211 55.9
arahy.Tifrunner.gnm1.ann1.1ZL8TB Arachis hypogaea HOM05D006025 ORTHO05D008547 1.3e-58 230.3 200 58.0
arahy.Tifrunner.gnm1.ann1.V5YJYF Arachis hypogaea HOM05D006025 ORTHO05D008547 1.3e-58 230.3 200 58.0
A09p23920 Brassica napus HOM05D006025 ORTHO05D008547 1.3e-58 230.3 209 56.0
BraA09t37996Z Brassica rapa HOM05D006025 ORTHO05D008547 1.3e-58 230.3 209 56.0
Glyma.01G040500 Glycine max HOM05D006025 ORTHO05D008547 1.3e-58 230.3 202 56.9
Gorai.009G347000 Gossypium raimondii HOM05D006025 ORTHO05D008547 1.3e-58 230.3 209 56.5
PSO478G1322 Papaver somniferum HOM05D006025 ORTHO05D008547 1.3e-58 230.3 211 56.4
RcHm_v2.0_Chr4g0440761 Rosa chinensis HOM05D006025 ORTHO05D008547 1.3e-58 230.3 203 56.2
SalBow8G3437 Salvia bowleyana HOM05D006025 ORTHO05D008547 1.3e-58 230.3 204 56.9
BcaC06g31223 Brassica carinata HOM05D006025 ORTHO05D008547 1.7e-58 229.9 211 56.4
Thhalv10004613m.g Eutrema salsugineum HOM05D006025 ORTHO05D008547 1.7e-58 229.9 211 55.9
BcaC06g34048 Brassica carinata HOM05D006025 ORTHO05D008547 2.3e-58 229.6 211 56.9
C07p33300 Brassica napus HOM05D006025 ORTHO05D008547 2.3e-58 229.6 211 56.9
Phvul.002G080900 Phaseolus vulgaris HOM05D006025 ORTHO05D008547 2.3e-58 229.6 194 57.7
A06p43550 Brassica napus HOM05D006025 ORTHO05D008547 3.0e-58 229.2 211 56.4
BolC9t55941H Brassica oleracea HOM05D006025 ORTHO05D008547 3.0e-58 229.2 204 57.4
BraA06t27240Z Brassica rapa HOM05D006025 ORTHO05D008547 3.0e-58 229.2 211 56.4
Gohir.A05G321100 Gossypium hirsutum HOM05D006025 ORTHO05D008547 3.0e-58 229.2 209 55.5
Rhsim12G0129700 Rhododendron simsii HOM05D006025 ORTHO05D008547 3.0e-58 229.2 212 54.2
AL5G11850 Arabidopsis lyrata HOM05D006025 ORTHO05D008547 3.9e-58 228.8 211 55.0
Migut.L01348 Erythranthe guttata HOM05D006025 ORTHO05D008547 3.9e-58 228.8 200 57.5
Potri.010G034400 Populus trichocarpa HOM05D006025 ORTHO05D008547 3.9e-58 228.8 208 56.2
GSVIVG01020079001 Vitis vinifera HOM05D006025 ORTHO05D008547 5.1e-58 228.4 202 57.4
Atru.chr11.1861 Acer truncatum HOM05D006025 ORTHO05D008547 1.1e-57 227.3 202 55.4
CANSAT78G1034 Cannabis sativa HOM05D006025 ORTHO05D008547 2.5e-57 226.1 211 53.6
AUR62026454 Chenopodium quinoa HOM05D006025 ORTHO05D008547 4.3e-57 225.3 210 55.7
Lsat_1_v5_gn_3_49700 Lactuca sativa HOM05D006025 ORTHO05D008547 5.6e-57 224.9 209 55.0
Medtr5g037600 Medicago truncatula HOM05D006025 ORTHO05D008547 5.6e-57 224.9 199 55.8
HanXRQChr17g0544581 Helianthus annuus HOM05D006025 ORTHO05D008547 7.3e-57 224.6 202 55.4
Lj2g0002167 Lotus japonicus HOM05D006025 ORTHO05D008547 7.3e-57 224.6 198 55.6
Aa31LG2G7560 Aethionema arabicum HOM05D006025 ORTHO05D008547 1.3e-56 223.8 211 55.5
C09p30780 Brassica napus HOM05D006025 ORTHO05D008547 1.3e-56 223.8 209 55.5
BcaC04g21520 Brassica carinata HOM05D006025 ORTHO05D008547 2.1e-56 223.0 209 55.0
Duzib268G1145 Durio zibethinus HOM05D006025 ORTHO05D008547 4.8e-56 221.9 197 55.8
Pp3c22_2360 Physcomitrium patens HOM05D006025 ORTHO05D008547 8.1e-56 221.1 206 57.3
Aqoxy3G00786 Aquilegia oxysepala HOM05D006025 ORTHO05D008547 9.0e-55 217.6 203 55.7
CARHR145110 Cardamine hirsuta HOM05D006025 ORTHO05D008547 9.0e-55 217.6 211 53.6
Sopen05g002930 Solanum pennellii HOM05D006025 ORTHO05D008547 9.0e-55 217.6 203 55.7
Oeu044566.1 Olea europaea HOM05D006025 ORTHO05D008547 1.5e-54 216.9 191 56.5
TPR.G26717 Trifolium pratense HOM05D006025 ORTHO05D008547 2.0e-54 216.5 202 54.5
CBR_g39595 Chara braunii HOM05D006025 ORTHO05D008547 3.4e-54 215.7 195 53.3
Cpa.g.sc73.14 Carica papaya HOM05D006025 ORTHO05D008547 4.4e-54 215.3 211 51.2
Cc11_g13550 Coffea canephora HOM05D006025 ORTHO05D008547 4.4e-54 215.3 205 53.2
vmacro16324 Vaccinium macrocarpon HOM05D006025 ORTHO05D008547 2.9e-53 212.6 254 45.7
Ca_04692_v3 Cicer arietinum L. HOM05D006025 ORTHO05D008547 3.8e-53 212.2 202 54.5
PGSC0003DMG400017619 Solanum tuberosum HOM05D006025 ORTHO05D008547 1.1e-52 210.7 205 54.1
Zm00001eb212770 Zea mays HOM05D006025 ORTHO05D008547 2.4e-52 209.5 197 54.8
BcaB07g30697 Brassica carinata HOM05D006025 ORTHO05D008547 3.2e-52 209.1 188 56.9
MSTRG.7831 Avicennia marina HOM05D006025 ORTHO05D008547 5.4e-52 208.4 189 55.0
Haze_12072 Corylus avellana HOM05D006025 ORTHO05D008547 9.3e-52 207.6 193 56.5
Psat2g115440 Pisum sativum HOM05D006025 ORTHO05D008547 1.2e-51 207.2 202 52.5
Eucgr.B02589 Eucalyptus grandis HOM05D006025 ORTHO05D008547 3.5e-51 205.7 177 59.3
unitig_62.g23684 Utricularia gibba HOM05D006025 ORTHO05D008547 1.7e-50 203.4 249 45.8
Nitab4.5_0002969g0040 Nicotiana tabacum HOM05D006025 ORTHO05D008547 2.3e-50 203.0 202 52.0
Peaxi162Scf00209g00517 Petunia axillaris HOM05D006025 ORTHO05D008547 8.7e-50 201.1 205 51.2
SGA_v2.0_scaffold87G26972 Striga asiatica HOM05D006025 ORTHO05D008547 4.8e-48 195.3 203 51.7
CDE07G0470 Ceratophyllum demersum HOM05D006025 ORTHO05D008547 8.1e-48 194.5 145 63.4
SalBow2G1916 Salvia bowleyana HOM05D006025 ORTHO05D008547 2.4e-47 193.0 201 47.3
HPP92_018837 Vanilla planifolia HOM05D006025 ORTHO05D008547 4.5e-38 162.2 142 54.2
SEGI_34054 Sequoiadendron giganteum HOM05D006025 ORTHO05D008547 3.0e-26 122.9 112 53.6
CDE06G2488 Ceratophyllum demersum HOM05D006025 ORTHO05D008547 1.3e-24 117.5 169 42.6
Solyc05g006965.1 Solanum lycopersicum HOM05D006025 ORTHO05D008547 3.9e-18 95.9 176 36.9
Glyma.02G024100 Glycine max HOM05D006025 ORTHO05D008547 1.3e-16 90.9 91 54.9
Hma1.2p1_0808F.1_g221580 Hydrangea macrophylla HOM05D006025 ORTHO05D008547 2.7e-11 73.2 71 56.3
Hma1.2p1_0513F.1_g169540 Hydrangea macrophylla HOM05D006025 ORTHO05D008547 4.7e-11 72.4 71 56.3
Zm00001eb151370 Zea mays HOM05D006025 ORTHO05D443914 1.5e-06 57.4 73 52.1


User provided reference genes

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