Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO146G0309 Selaginella moellendorffii HOM05D005491 ORTHO05D006973 6.1e-85 317.4 153 100.0
Pp3c7_5080 Physcomitrium patens HOM05D005491 ORTHO05D006973 1.8e-49 199.5 150 63.3
AagrBONN_evm.TU.Sc2ySwM_368.2001 Anthoceros agrestis HOM05D005491 ORTHO05D006973 1.3e-47 193.4 149 61.7
Mapoly0005s0279 Marchantia polymorpha HOM05D005491 ORTHO05D006973 3.6e-45 185.3 149 58.4
Nitab4.5_0001691g0110 Nicotiana tabacum HOM05D005491 ORTHO05D006973 8.3e-34 147.5 145 48.3
Nitab4.5_0002885g0050 Nicotiana tabacum HOM05D005491 ORTHO05D006973 8.3e-34 147.5 145 48.3
Dinv20356 Davidia involucrata HOM05D005491 ORTHO05D006973 1.8e-33 146.4 150 46.0
AUR62025582 Chenopodium quinoa HOM05D005491 ORTHO05D006973 5.4e-33 144.8 145 47.6
CAN.G790.23 Capsicum annuum HOM05D005491 ORTHO05D006973 7.0e-33 144.4 145 47.6
Eucgr.F04012 Eucalyptus grandis HOM05D005491 ORTHO05D006973 7.0e-33 144.4 148 45.9
Oeu023761.1 Olea europaea HOM05D005491 ORTHO05D006973 9.2e-33 144.1 149 43.0
Sc15g0000930 Simmondsia chinensis HOM05D005491 ORTHO05D006973 1.2e-32 143.7 145 49.0
vmacro17061 Vaccinium macrocarpon HOM05D005491 ORTHO05D006973 1.6e-32 143.3 149 45.6
Ah.15g094670 Amaranthus hybridus HOM05D005491 ORTHO05D006973 2.0e-32 142.9 145 46.2
ATR0580G202 Amborella trichopoda HOM05D005491 ORTHO05D006973 2.0e-32 142.9 149 44.3
Peaxi162Scf00038g02533 Petunia axillaris HOM05D005491 ORTHO05D006973 2.0e-32 142.9 145 46.9
Hund18611 Selenicereus undatus HOM05D005491 ORTHO05D006973 2.0e-32 142.9 150 45.3
Duzib192G0032 Durio zibethinus HOM05D005491 ORTHO05D006973 2.7e-32 142.5 151 43.7
MD09G1158800 Malus domestica HOM05D005491 ORTHO05D006973 3.5e-32 142.1 149 45.6
AUR62001366 Chenopodium quinoa HOM05D004422 ORTHO05D007331 4.6e-32 141.7 143 46.9
PGSC0003DMG400009162 Solanum tuberosum HOM05D005491 ORTHO05D006973 7.8e-32 141.0 145 46.2
Haze_10760 Corylus avellana HOM05D005491 ORTHO05D006973 1.0e-31 140.6 153 42.5
Gorai.009G118600 Gossypium raimondii HOM05D005491 ORTHO05D006973 1.0e-31 140.6 149 45.0
Lalb_Chr04g0264721 Lupinus albus HOM05D005491 ORTHO05D006973 1.0e-31 140.6 145 46.9
Sed0002659 Sechium edule HOM05D005491 ORTHO05D006973 2.3e-31 139.4 145 49.0
Thecc.06G064400 Theobroma cacao HOM05D005491 ORTHO05D006973 2.3e-31 139.4 150 43.3
Gohir.A05G114100 Gossypium hirsutum HOM05D005491 ORTHO05D006973 3.0e-31 139.0 149 44.3
Rhsim12G0214300 Rhododendron simsii HOM05D005491 ORTHO05D006973 3.0e-31 139.0 149 45.0
arahy.Tifrunner.gnm1.ann1.5V72PU Arachis hypogaea HOM05D005491 ORTHO05D006973 3.9e-31 138.7 144 44.4
MELO3C006296.2 Cucumis melo HOM05D005491 ORTHO05D006973 3.9e-31 138.7 150 47.3
CsaV3_3G010780 Cucumis sativus L. HOM05D005491 ORTHO05D006973 5.0e-31 138.3 150 47.3
VMungo0647G0411 Vigna mungo HOM05D005491 ORTHO05D006973 5.0e-31 138.3 148 45.9
FAN02G3895 Fragaria x ananassa HOM05D005491 ORTHO05D006973 6.6e-31 137.9 150 44.7
ClCG05G003150 Citrullus lanatus HOM05D005491 ORTHO05D006973 8.6e-31 137.5 150 46.7
Gohir.D05G114500 Gossypium hirsutum HOM05D005491 ORTHO05D006973 8.6e-31 137.5 149 44.3
Nn2g12576 Nelumbo nucifera HOM05D005491 ORTHO05D006973 8.6e-31 137.5 149 43.0
GSVIVG01016137001 Vitis vinifera HOM05D005491 ORTHO05D006973 8.6e-31 137.5 150 44.7
Actinidia31136 Actinidia chinensis HOM05D005491 ORTHO05D006973 1.1e-30 137.1 148 43.9
MBI14_g30702_MAGBIO Magnolia biondii HOM05D005491 ORTHO05D006973 1.1e-30 137.1 149 43.0
EL10Ac7g18224 Beta vulgaris HOM05D005491 ORTHO05D006973 1.9e-30 136.3 145 46.2
Manes.16G045400 Manihot esculenta HOM05D005491 ORTHO05D006973 1.9e-30 136.3 148 45.3
Sed0027406 Sechium edule HOM05D005491 ORTHO05D006973 1.9e-30 136.3 145 48.3
Atru.chr1.2698 Acer truncatum HOM05D005491 ORTHO05D006973 2.5e-30 136.0 149 43.6
arahy.Tifrunner.gnm1.ann1.PDFG4L Arachis hypogaea HOM05D005491 ORTHO05D006973 2.5e-30 136.0 144 43.8
CiPaw.02G049600 Carya illinoinensis HOM05D005491 ORTHO05D006973 2.5e-30 136.0 149 43.6
FAN09G1743 Fragaria x ananassa HOM05D005491 ORTHO05D006973 2.5e-30 136.0 150 44.0
Lj6A3G42 Lonicera japonica HOM05D005491 ORTHO05D006973 2.5e-30 136.0 149 43.6
Lj6C21T3 Lonicera japonica HOM05D005491 ORTHO05D006973 2.5e-30 136.0 149 43.6
FvH4_6g37280 Fragaria vesca HOM05D005491 ORTHO05D006973 3.3e-30 135.6 150 44.0
FAN14G5581 Fragaria x ananassa HOM05D005491 ORTHO05D005725 3.3e-30 135.6 150 44.0
Glyma.08G222600 Glycine max HOM05D005491 ORTHO05D006973 3.3e-30 135.6 149 43.6
CSS0040638 Camellia sinensis var. sinensis HOM05D005491 ORTHO05D006973 4.3e-30 135.2 149 43.6
Ciclev10026115m.g Citrus clementina HOM05D005491 ORTHO05D006973 4.3e-30 135.2 151 43.0
Cc04_g00370 Coffea canephora HOM05D005491 ORTHO05D006973 4.3e-30 135.2 152 42.1
PGR102G1295 Punica granatum HOM05D005491 ORTHO05D006973 4.3e-30 135.2 149 45.0
RcHm_v2.0_Chr2g0150111 Rosa chinensis HOM05D005491 ORTHO05D006973 4.3e-30 135.2 150 43.3
BcaC05g28263 Brassica carinata HOM05D005491 ORTHO05D006973 5.6e-30 134.8 144 44.4
C05p42580 Brassica napus HOM05D005491 ORTHO05D006973 5.6e-30 134.8 144 44.4
BolC5t32978H Brassica oleracea HOM05D005491 ORTHO05D006973 5.6e-30 134.8 144 44.4
Ca_20955_v3 Cicer arietinum L. HOM05D005491 ORTHO05D006973 9.5e-30 134.0 142 43.0
SalBow7G0632 Salvia bowleyana HOM05D005491 ORTHO05D006973 9.5e-30 134.0 144 45.8
Sopen03g041620 Solanum pennellii HOM05D005491 ORTHO05D006973 9.5e-30 134.0 145 44.1
BcaB06g26202 Brassica carinata HOM05D005491 ORTHO05D006973 1.2e-29 133.7 144 45.1
TAR383G0879 Trochodendron aralioides HOM05D005491 ORTHO05D006973 1.2e-29 133.7 149 43.0
A05p27490 Brassica napus HOM05D005491 ORTHO05D006973 1.6e-29 133.3 144 43.8
Carub.0003s2116 Capsella rubella HOM05D005491 ORTHO05D006973 1.6e-29 133.3 144 44.4
Solyc03g123880.3 Solanum lycopersicum HOM05D005491 ORTHO05D006973 1.6e-29 133.3 145 44.1
Phvul.008G255600 Phaseolus vulgaris HOM05D005491 ORTHO05D006973 2.1e-29 132.9 142 44.4
Psat7g263520 Pisum sativum HOM05D005491 ORTHO05D006973 2.1e-29 132.9 144 41.7
AL3G35200 Arabidopsis lyrata HOM05D005491 ORTHO05D006973 2.8e-29 132.5 144 43.8
BraA01t03481Z Brassica rapa HOM05D005491 ORTHO05D006973 2.8e-29 132.5 149 43.0
BraA05t21640Z Brassica rapa HOM05D005491 ORTHO05D006973 2.8e-29 132.5 144 43.8
Potri.010G250200 Populus trichocarpa HOM05D005491 ORTHO05D006973 2.8e-29 132.5 143 44.1
A01p33690 Brassica napus HOM05D005491 ORTHO05D006973 6.2e-29 131.3 144 43.8
TPR.G38706 Trifolium pratense HOM05D005491 ORTHO05D006973 6.2e-29 131.3 144 41.0
AT3G21200 Arabidopsis thaliana HOM05D005491 ORTHO05D006973 8.0e-29 131.0 144 43.1
Sabra10G0194700 Salix brachista HOM05D005491 ORTHO05D006973 8.0e-29 131.0 143 43.4
Sp3g19180 Schrenkiella parvula HOM05D005491 ORTHO05D006973 8.0e-29 131.0 144 43.8
Aa31LG8G7890 Aethionema arabicum HOM05D005491 ORTHO05D006973 1.0e-28 130.6 144 42.4
BcaC09g49056 Brassica carinata HOM05D005491 ORTHO05D006973 1.4e-28 130.2 144 43.1
Lj3g0002967 Lotus japonicus HOM05D005491 ORTHO05D006973 1.4e-28 130.2 149 43.0
Medtr4g006200 Medicago truncatula HOM05D005491 ORTHO05D006973 1.4e-28 130.2 144 41.7
TWI18G1464 Tripterygium wilfordii HOM05D005491 ORTHO05D006973 1.4e-28 130.2 149 40.9
Thhalv10021146m.g Eutrema salsugineum HOM05D005491 ORTHO05D006973 1.8e-28 129.8 144 43.8
Thhalv10021148m.g Eutrema salsugineum HOM05D005491 ORTHO05D006973 1.8e-28 129.8 144 43.8
Lsat_1_v5_gn_4_88641 Lactuca sativa HOM05D005491 ORTHO05D006973 1.8e-28 129.8 145 43.4
CANSAT01G1753 Cannabis sativa HOM05D005491 ORTHO05D006973 2.3e-28 129.4 149 43.0
DCAR_007669 Daucus carota HOM05D005491 ORTHO05D006973 2.3e-28 129.4 152 42.8
HanXRQChr09g0277401 Helianthus annuus HOM05D005491 ORTHO05D006973 3.1e-28 129.0 143 42.7
CARHR097080 Cardamine hirsuta HOM05D005491 ORTHO05D006973 4.0e-28 128.6 144 43.1
CDE05G1859 Ceratophyllum demersum HOM05D005491 ORTHO05D006973 4.0e-28 128.6 149 40.9
C01p43060 Brassica napus HOM05D005491 ORTHO05D006973 8.9e-28 127.5 144 42.4
BolC1t04253H Brassica oleracea HOM05D005491 ORTHO05D006973 8.9e-28 127.5 144 42.4
CDE02G1684 Ceratophyllum demersum HOM05D005491 ORTHO05D006973 1.2e-27 127.1 149 40.3
SGA_v2.0_scaffold4G02103 Striga asiatica HOM05D005491 ORTHO05D006973 1.2e-27 127.1 144 42.4
BcaB04g20605 Brassica carinata HOM05D005491 ORTHO05D006973 2.0e-27 126.3 139 45.3
Migut.D00894 Erythranthe guttata HOM05D005491 ORTHO05D006973 4.4e-27 125.2 145 40.7
THA.LOC104817926 Tarenaya hassleriana HOM05D005491 ORTHO05D006973 1.3e-26 123.6 149 40.3
PSO063G4509 Papaver somniferum HOM05D005491 ORTHO05D006973 1.7e-26 123.2 147 40.1
PSO782G2961 Papaver somniferum HOM05D005491 ORTHO05D006973 8.3e-26 120.9 147 39.5
Zm00001eb319280 Zea mays HOM05D005491 ORTHO05D006973 9.2e-25 117.5 149 38.3
unitig_8.g3563 Utricularia gibba HOM05D006979 ORTHO05D008857 2.7e-24 115.9 149 38.9
Aqoxy7G03200 Aquilegia oxysepala HOM05D005491 ORTHO05D006973 6.0e-24 114.8 150 39.3
MSTRG.4527 Avicennia marina HOM05D005491 ORTHO05D006973 1.3e-23 113.6 122 45.1
BcaNung05297 Brassica carinata HOM05D005491 ORTHO05D006973 3.9e-23 112.1 144 39.6
ECA232G0321 Erigeron canadensis HOM05D005491 ORTHO05D006973 3.9e-23 112.1 129 41.1
HPP92_013427 Vanilla planifolia HOM05D005491 ORTHO05D006973 2.5e-22 109.4 140 37.9
Zm00001eb170870 Zea mays HOM05D005491 ORTHO05D006973 1.5e-19 100.1 119 38.7
SEGI_08052 Sequoiadendron giganteum HOM05D005491 ORTHO05D006973 8.3e-18 94.4 103 44.7
MCO13G019 Micromonas commoda HOM05D005491 ORTHO05D006973 9.2e-17 90.9 132 35.6
arahy.Tifrunner.gnm1.ann1.S1MR2L Arachis hypogaea HOM05D005491 ORTHO05D006973 3.0e-15 85.9 77 53.2
Cre03.g156600 Chlamydomonas reinhardtii HOM05D005491 ORTHO05D006973 4.3e-14 82.0 122 39.3
COL.COLO4_31205 Corchorus olitorius HOM05D005491 ORTHO05D006973 4.3e-14 82.0 86 41.9
Glyma.14G098400 Glycine max HOM05D005491 ORTHO05D006973 1.2e-13 80.5 105 37.1
Actinidia00637 Actinidia chinensis HOM05D005491 ORTHO05D006973 8.1e-13 77.8 86 40.7
CBR_g22384 Chara braunii HOM05D005491 ORTHO05D006973 8.1e-13 77.8 60 65.0
Medtr4g005800 Medicago truncatula HOM05D005491 ORTHO05D006973 2.2e-10 69.7 68 39.7
Medtr3g006055 Medicago truncatula HOM05D005491 ORTHO05D006973 2.9e-10 69.3 112 31.2
PRCOL_00005430 Prasinoderma coloniale HOM05D005491 ORTHO05D006973 3.8e-10 68.9 112 34.8
Cpa.g.c36201.2 Carica papaya HOM05D005491 ORTHO05D006973 2.7e-08 62.8 64 46.9
RcHm_v2.0_Chr3g0481151 Rosa chinensis HOM05D000090 ORTHO05D000083 3.5e-08 62.4 65 47.7
MD17G1145100 Malus domestica HOM05D005491 ORTHO05D006973 3.9e-07 58.9 52 48.1


User provided reference genes

Program Settings