Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 1.2e-125 453.0 206 100.0
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 4.2e-73 278.5 209 60.8
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 5.7e-70 268.1 216 57.9
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 1.6e-69 266.5 214 57.9
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 1.6e-69 266.5 211 57.3
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 2.2e-69 266.2 215 54.9
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 3.7e-69 265.4 207 56.0
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 4.8e-69 265.0 225 54.2
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 4.8e-69 265.0 218 56.0
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 6.3e-69 264.6 212 54.7
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 6.3e-69 264.6 218 56.4
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 1.1e-68 263.8 211 59.7
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 1.4e-68 263.5 222 57.2
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 1.4e-68 263.5 214 56.1
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 1.4e-68 263.5 218 56.0
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 2.4e-68 262.7 205 57.1
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 3.1e-68 262.3 214 55.6
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 3.1e-68 262.3 222 56.8
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 4.1e-68 261.9 214 57.0
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 6.9e-68 261.2 212 58.5
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 9.1e-68 260.8 214 56.5
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 1.2e-67 260.4 217 56.7
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 1.2e-67 260.4 219 57.1
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 1.5e-67 260.0 220 56.4
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 2.0e-67 259.6 216 54.6
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 2.6e-67 259.2 212 54.2
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 2.6e-67 259.2 211 56.4
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 4.5e-67 258.5 216 55.6
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 4.5e-67 258.5 217 55.8
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 4.5e-67 258.5 209 55.0
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 5.9e-67 258.1 209 55.5
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 5.9e-67 258.1 213 57.3
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 7.7e-67 257.7 217 56.2
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 7.7e-67 257.7 213 55.4
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 7.7e-67 257.7 211 55.9
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 1.0e-66 257.3 219 53.4
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 1.0e-66 257.3 210 54.8
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 1.3e-66 256.9 217 54.8
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 1.7e-66 256.5 214 54.2
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 1.7e-66 256.5 222 53.2
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 3.8e-66 255.4 217 56.2
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 3.8e-66 255.4 212 55.7
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 5.0e-66 255.0 218 53.7
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 6.5e-66 254.6 219 53.9
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 6.5e-66 254.6 215 54.9
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 1.1e-65 253.8 211 55.0
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 1.4e-65 253.4 223 54.3
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 2.5e-65 252.7 215 53.5
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 2.5e-65 252.7 212 52.8
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 2.5e-65 252.7 215 52.6
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 2.5e-65 252.7 216 52.8
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 5.5e-65 251.5 212 53.8
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 7.2e-65 251.1 218 53.7
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 7.2e-65 251.1 208 54.8
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 9.4e-65 250.8 220 53.6
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 9.4e-65 250.8 218 52.8
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 9.4e-65 250.8 215 56.3
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 1.2e-64 250.4 216 53.7
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 2.1e-64 249.6 217 52.5
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 2.1e-64 249.6 211 53.1
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 2.1e-64 249.6 211 53.1
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 3.6e-64 248.8 220 51.8
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 4.6e-64 248.4 215 53.5
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 4.6e-64 248.4 215 53.5
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 6.1e-64 248.1 215 51.2
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 1.4e-63 246.9 214 55.6
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 2.3e-63 246.1 216 53.2
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 2.3e-63 246.1 212 54.7
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 3.0e-63 245.7 223 53.4
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 3.9e-63 245.4 217 54.4
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 5.1e-63 245.0 211 53.6
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 1.1e-62 243.8 217 53.0
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 3.3e-62 242.3 188 60.1
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 9.7e-62 240.7 260 46.5
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 2.2e-61 239.6 212 52.4
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 2.8e-61 239.2 231 48.1
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 2.8e-61 239.2 193 54.9
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 1.1e-60 237.3 213 50.7
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 3.1e-60 235.7 253 47.4
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 1.2e-59 233.8 186 56.5
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 4.5e-59 231.9 185 57.8
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 6.5e-58 228.0 191 52.9
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 1.1e-57 227.3 191 53.9
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 1.1e-57 227.3 184 57.1
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 1.1e-57 227.3 185 56.2
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 1.4e-57 226.9 231 48.1
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 1.9e-57 226.5 185 54.6
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 1.2e-56 223.8 188 54.3
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 1.6e-56 223.4 178 57.3
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 3.6e-56 222.2 180 58.3
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 3.6e-56 222.2 223 49.8
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 3.6e-56 222.2 187 54.0
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 3.6e-56 222.2 179 55.9
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 4.7e-56 221.9 183 54.1
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 6.1e-56 221.5 176 58.5
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 1.0e-55 220.7 187 53.5
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 8.8e-55 217.6 179 57.5
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 2.0e-54 216.5 176 56.8
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 1.3e-53 213.8 209 49.3
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 2.2e-53 213.0 179 54.7
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 3.7e-53 212.2 177 54.2
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 4.1e-52 208.8 181 53.6
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 4.1e-52 208.8 181 53.6
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 4.1e-52 208.8 183 54.6
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 1.6e-51 206.8 214 47.2
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 1.9e-49 199.9 175 52.6
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 6.1e-48 194.9 208 47.1
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 8.2e-45 184.5 214 44.4
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 8.2e-45 184.5 214 44.4
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 1.8e-44 183.3 197 48.7
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 3.1e-44 182.6 218 44.5
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 2.8e-37 159.5 141 51.1
SMO146G0045 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 4.1e-36 155.6 178 52.8
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 5.9e-35 151.8 137 50.4
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 7.7e-35 151.4 120 55.0
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 2.6e-30 136.3 70 71.4
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 2.2e-29 133.3 70 72.9
PRCOL_00002330 Prasinoderma coloniale HOM05D006795 ORTHO05D008573 3.1e-07 59.7 61 39.3


User provided reference genes

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