Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO146G0235 Selaginella moellendorffii HOM05D020292 ORTHO05D030583 1.4e-164 582.8 283 100.0
SMO173G0076 Selaginella moellendorffii HOM05D020292 ORTHO05D030583 2.8e-91 339.3 240 74.6
SMO361G0781 Selaginella moellendorffii HOM05D020292 ORTHO05D030583 3.3e-68 262.7 227 65.6
SMO163G0092 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 6.8e-66 255.0 201 69.7
SMO265G0018 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 6.0e-62 241.9 185 69.7
SMO196G0003 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 8.7e-45 184.9 131 71.8
SMO163G0069 Selaginella moellendorffii HOM05D020292 ORTHO05D007481 9.6e-44 181.4 157 64.3
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.2e-41 174.5 89 89.9
SMO340G0002 Selaginella moellendorffii HOM05D020292 ORTHO05D377625 1.2e-33 147.9 76 89.5
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 2.6e-25 120.2 77 76.6
SMO118G0229 Selaginella moellendorffii HOM05D020292 ORTHO05D030583 5.8e-25 119.0 99 66.7
Pp3c3_16750 Physcomitrium patens HOM05D005909 ORTHO05D007481 2.1e-22 110.5 112 42.0
Pp3c12_7340 Physcomitrium patens HOM05D005909 ORTHO05D007481 1.0e-21 108.2 112 41.1
AagrBONN_evm.TU.Sc2ySwM_362.1435 Anthoceros agrestis HOM05D004406 ORTHO05D005660 1.9e-20 104.0 112 42.0
Mapoly0100s0051 Marchantia polymorpha HOM05D005909 ORTHO05D007481 4.3e-20 102.8 113 44.2
Lsat_1_v5_gn_3_62021 Lactuca sativa HOM05D005909 ORTHO05D007481 5.9e-17 92.4 112 41.1
Aqoxy3G04056 Aquilegia oxysepala HOM05D005909 ORTHO05D007481 6.5e-16 89.0 110 40.0
Ciclev10015519m.g Citrus clementina HOM05D005909 ORTHO05D007481 8.5e-16 88.6 111 40.5
Eucgr.G02238 Eucalyptus grandis HOM05D005909 ORTHO05D007481 8.5e-16 88.6 111 44.1
MD16G1037200 Malus domestica HOM05D005909 ORTHO05D007481 8.5e-16 88.6 111 40.5
PSO063G1187 Papaver somniferum HOM05D005909 ORTHO05D007481 8.5e-16 88.6 111 43.2
PSO782G5715 Papaver somniferum HOM05D005909 ORTHO05D007481 8.5e-16 88.6 111 43.2
SalBow8G0352 Salvia bowleyana HOM05D005909 ORTHO05D007481 8.5e-16 88.6 111 43.2
SalBow8G3248 Salvia bowleyana HOM05D005909 ORTHO05D007481 8.5e-16 88.6 111 43.2
AL5G17030 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 1.1e-15 88.2 112 39.3
Carub.0005s0605 Capsella rubella HOM05D005909 ORTHO05D007481 1.1e-15 88.2 112 40.2
Actinidia14921 Actinidia chinensis HOM05D005909 ORTHO05D007481 1.4e-15 87.8 111 41.4
ECA246G0525 Erigeron canadensis HOM05D005909 ORTHO05D007481 1.4e-15 87.8 118 39.0
Prupe.1G316800 Prunus persica HOM05D005909 ORTHO05D007481 1.4e-15 87.8 111 40.5
MBI16_g44832_MAGBIO Magnolia biondii HOM05D005909 ORTHO05D007481 1.9e-15 87.4 111 40.5
CSS0033004 Camellia sinensis var. sinensis HOM05D005909 ORTHO05D007481 2.5e-15 87.0 112 42.0
Nn4g23953 Nelumbo nucifera HOM05D005909 ORTHO05D007481 2.5e-15 87.0 112 41.1
Migut.E00369 Erythranthe guttata HOM05D005909 ORTHO05D007481 3.2e-15 86.7 111 40.5
Oeu027686.1 Olea europaea HOM05D005909 ORTHO05D007481 3.2e-15 86.7 110 42.7
Os01g0691500 Oryza sativa ssp. japonica HOM05D005909 ORTHO05D007481 4.2e-15 86.3 108 40.7
Atru.chr11.237 Acer truncatum HOM05D005909 ORTHO05D007481 5.5e-15 85.9 111 40.5
HanXRQChr15g0477421 Helianthus annuus HOM05D005909 ORTHO05D007481 5.5e-15 85.9 112 40.2
TAR622G1259 Trochodendron aralioides HOM05D005909 ORTHO05D007481 7.2e-15 85.5 108 41.7
COL.COLO4_32148 Corchorus olitorius HOM05D005909 ORTHO05D007481 9.4e-15 85.1 111 40.5
Manes.06G064900 Manihot esculenta HOM05D005909 ORTHO05D007481 9.4e-15 85.1 112 42.0
TWI79G1572 Tripterygium wilfordii HOM05D005909 ORTHO05D007481 9.4e-15 85.1 111 39.6
AL5G10170 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 1.2e-14 84.7 111 40.5
CDE08G1136 Ceratophyllum demersum HOM05D005909 ORTHO05D007481 1.6e-14 84.3 113 42.5
Cc11_g09670 Coffea canephora HOM05D005909 ORTHO05D007481 1.6e-14 84.3 111 41.4
Gohir.A03G148900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 1.6e-14 84.3 110 38.2
Gorai.005G193400 Gossypium raimondii HOM05D005909 ORTHO05D007481 1.6e-14 84.3 110 38.2
Hma1.2p1_2306F.1_g319360 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 1.6e-14 84.3 113 38.1
Aa31LG2G8670 Aethionema arabicum HOM05D005909 ORTHO05D007481 2.1e-14 84.0 113 41.6
Thecc.02G222000 Theobroma cacao HOM05D005909 ORTHO05D007481 2.1e-14 84.0 110 40.0
Duzib248G1493 Durio zibethinus HOM05D005909 ORTHO05D007481 2.7e-14 83.6 111 38.7
Gohir.D02G171900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 2.7e-14 83.6 110 37.3
Hma1.2p1_1314F.1_g274990 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 2.7e-14 83.6 113 37.2
Sc14g0007280 Simmondsia chinensis HOM05D005909 ORTHO05D007481 2.7e-14 83.6 111 39.6
GSVIVG01011843001 Vitis vinifera HOM05D005909 ORTHO05D007481 2.7e-14 83.6 112 41.1
CARHR143760 Cardamine hirsuta HOM05D005909 ORTHO05D007481 3.6e-14 83.2 111 39.6
ClCG01G005900 Citrullus lanatus HOM05D005909 ORTHO05D007481 3.6e-14 83.2 112 40.2
vmacro10599 Vaccinium macrocarpon HOM05D005909 ORTHO05D007481 3.6e-14 83.2 114 39.5
Ca_06889_v3 Cicer arietinum L. HOM05D005909 ORTHO05D007481 4.6e-14 82.8 111 39.6
CsaV3_5G028790 Cucumis sativus L. HOM05D005909 ORTHO05D007481 4.6e-14 82.8 112 39.3
Lj5g0016761 Lotus japonicus HOM05D005909 ORTHO05D007481 4.6e-14 82.8 111 39.6
AT3G27610 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 6.1e-14 82.4 111 37.8
DCAR_007264 Daucus carota HOM05D005909 ORTHO05D007481 6.1e-14 82.4 110 42.7
Lalb_Chr21g0308731 Lupinus albus HOM05D005909 ORTHO05D007481 6.1e-14 82.4 110 40.9
QL01p010815 Quercus lobata HOM05D005909 ORTHO05D007481 6.1e-14 82.4 113 38.9
QL93p0145_0024 Quercus lobata HOM05D005909 ORTHO05D007481 6.1e-14 82.4 113 38.9
CARHR148990 Cardamine hirsuta HOM05D005909 ORTHO05D007481 7.9e-14 82.0 111 37.8
Haze_00654 Corylus avellana HOM05D005909 ORTHO05D007481 7.9e-14 82.0 114 38.6
MELO3C005340.2 Cucumis melo HOM05D005909 ORTHO05D007481 7.9e-14 82.0 111 37.8
Sed0017467 Sechium edule HOM05D005909 ORTHO05D007481 7.9e-14 82.0 111 39.6
TPR.G4906 Trifolium pratense HOM05D005909 ORTHO05D007481 7.9e-14 82.0 110 39.1
Zm00001eb360650 Zea mays HOM05D005909 ORTHO05D007481 7.9e-14 82.0 109 38.5
Phvul.007G032000 Phaseolus vulgaris HOM05D005909 ORTHO05D007481 1.0e-13 81.6 110 39.1
RcHm_v2.0_Chr4g0434411 Rosa chinensis HOM05D005909 ORTHO05D007481 1.4e-13 81.3 109 38.5
Sp2g12680 Schrenkiella parvula HOM05D005909 ORTHO05D007481 1.4e-13 81.3 111 36.9
MSTRG.13555 Avicennia marina HOM05D005909 ORTHO05D007481 1.8e-13 80.9 111 41.4
CANSAT01G0643 Cannabis sativa HOM05D005909 ORTHO05D007481 1.8e-13 80.9 110 42.7
HPP92_024514 Vanilla planifolia HOM05D005909 ORTHO05D007481 1.8e-13 80.9 113 38.9
AT2G01220 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 2.3e-13 80.5 110 40.0
FAN22G0620 Fragaria x ananassa HOM05D005909 ORTHO05D007481 2.3e-13 80.5 109 39.4
Ah.03g138370 Amaranthus hybridus HOM05D005909 ORTHO05D007481 3.0e-13 80.1 111 42.3
CiPaw.05G242600 Carya illinoinensis HOM05D005909 ORTHO05D007481 3.0e-13 80.1 114 38.6
FvH4_4g26720 Fragaria vesca HOM05D005909 ORTHO05D007481 3.0e-13 80.1 109 38.5
FAN12G0127 Fragaria x ananassa HOM05D005909 ORTHO05D007481 3.0e-13 80.1 109 38.5
SGA_v2.0_scaffold14G06904 Striga asiatica HOM05D005909 ORTHO05D007481 3.0e-13 80.1 110 39.1
A06p44550 Brassica napus HOM05D005909 ORTHO05D007481 3.9e-13 79.7 111 36.0
BraA06t27329Z Brassica rapa HOM05D005909 ORTHO05D007481 3.9e-13 79.7 111 36.0
Cfa015837 Carpinus fangiana HOM05D005909 ORTHO05D007481 3.9e-13 79.7 113 37.2
Glyma.20G120600 Glycine max HOM05D005909 ORTHO05D007481 3.9e-13 79.7 113 39.8
Hund20744 Selenicereus undatus HOM05D005909 ORTHO05D007481 3.9e-13 79.7 111 36.9
VMungo0720G1068 Vigna mungo HOM05D005909 ORTHO05D007481 3.9e-13 79.7 110 38.2
CBR_g39317 Chara braunii HOM05D005909 ORTHO05D007481 5.1e-13 79.3 105 41.0
Medtr1g109590 Medicago truncatula HOM05D005909 ORTHO05D007481 5.1e-13 79.3 112 37.5
C07p31670 Brassica napus HOM05D005909 ORTHO05D007481 8.8e-13 78.6 111 36.0
BolC7t43706H Brassica oleracea HOM05D005909 ORTHO05D007481 8.8e-13 78.6 111 36.0
Potri.010G120200 Populus trichocarpa HOM05D005909 ORTHO05D007481 8.8e-13 78.6 108 37.0
PGR119G2457 Punica granatum HOM05D005909 ORTHO05D007481 8.8e-13 78.6 111 38.7
BcaC06g34207 Brassica carinata HOM05D005909 ORTHO05D007481 1.1e-12 78.2 111 36.0
Dinv31596 Davidia involucrata HOM05D005909 ORTHO05D007481 1.1e-12 78.2 109 39.4
Nitab4.5_0002112g0090 Nicotiana tabacum HOM05D005909 ORTHO05D007481 1.5e-12 77.8 111 39.6
Sopen05g004630 Solanum pennellii HOM05D005909 ORTHO05D007481 1.5e-12 77.8 111 39.6
Carub.0005s0021 Capsella rubella HOM05D005909 ORTHO05D007481 2.0e-12 77.4 111 36.9
CAN.G610.24 Capsicum annuum HOM05D005909 ORTHO05D007481 2.0e-12 77.4 110 38.2
Nitab4.5_0000694g0120 Nicotiana tabacum HOM05D005909 ORTHO05D007481 2.0e-12 77.4 111 39.6
Solyc05g008870.3 Solanum lycopersicum HOM05D005909 ORTHO05D007481 2.0e-12 77.4 111 39.6
arahy.Tifrunner.gnm1.ann1.IU6D7D Arachis hypogaea HOM05D005909 ORTHO05D007481 2.5e-12 77.0 113 39.8
Thhalv10000909m.g Eutrema salsugineum HOM05D005909 ORTHO05D007481 5.7e-12 75.9 112 36.6
Sabra10G0090400 Salix brachista HOM05D005909 ORTHO05D007481 5.7e-12 75.9 109 36.7
arahy.Tifrunner.gnm1.ann1.W577BF Arachis hypogaea HOM05D005909 ORTHO05D007481 9.7e-12 75.1 111 39.6
THA.LOC104823950 Tarenaya hassleriana HOM05D005909 ORTHO05D007481 1.3e-11 74.7 98 42.9
Psat6g224680 Pisum sativum HOM05D005909 ORTHO05D007481 2.2e-11 73.9 110 35.5
Actinidia16683 Actinidia chinensis HOM05D005909 ORTHO05D007481 4.8e-11 72.8 112 36.6
ATR0807G244 Amborella trichopoda HOM05D005909 ORTHO05D007481 8.2e-11 72.0 109 36.7
AUR62037268 Chenopodium quinoa HOM05D005909 ORTHO05D007481 1.8e-10 70.9 115 37.4
AUR62002812 Chenopodium quinoa HOM05D005909 ORTHO05D007481 4.1e-10 69.7 119 37.8
EL10Ac6g14305 Beta vulgaris HOM05D005909 ORTHO05D007481 6.9e-10 68.9 109 37.6
FAN12G0185 Fragaria x ananassa HOM05D005909 ORTHO05D007481 6.9e-10 68.9 126 34.1
Rhsim09G0103900 Rhododendron simsii HOM05D005909 ORTHO05D007481 6.9e-10 68.9 129 31.8
SEGI_32432 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 6.9e-10 68.9 63 52.4
FAN17G2694 Fragaria x ananassa HOM05D005909 ORTHO05D007481 2.6e-09 67.0 85 40.0
FAN07G1481 Fragaria x ananassa HOM05D005909 ORTHO05D007481 4.5e-09 66.2 85 40.0
TAR622G0977 Trochodendron aralioides HOM05D005909 ORTHO05D007481 1.7e-08 64.3 82 40.2
Lj6A753G52 Lonicera japonica HOM05D005909 ORTHO05D007481 9.4e-07 58.5 57 50.9
unitig_699.g19483 Utricularia gibba HOM05D005909 ORTHO05D007481 9.4e-07 58.5 90 36.7
Cpa.g.sc65.66 Carica papaya HOM05D005909 ORTHO05D007481 2.1e-06 57.4 110 36.4
Carub.0005s0593 Capsella rubella HOM05D005909 ORTHO05D007481 2.7e-06 57.0 100 33.0


User provided reference genes

Program Settings