Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO146G0189 Selaginella moellendorffii HOM05D004964 ORTHO05D005918 2.4e-226 788.5 393 100.0
Rhsim09G0136900 Rhododendron simsii HOM05D004964 ORTHO05D005918 2.6e-39 167.2 458 34.1
CiPaw.07G072600 Carya illinoinensis HOM05D004964 ORTHO05D005918 1.6e-36 157.9 432 29.9
Glyma.03G113500 Glycine max HOM05D004964 ORTHO05D005918 2.1e-36 157.5 430 30.9
Cfa006356 Carpinus fangiana HOM05D004964 ORTHO05D005918 3.5e-36 156.8 428 31.1
RcHm_v2.0_Chr3g0449661 Rosa chinensis HOM05D004964 ORTHO05D005918 4.6e-36 156.4 442 30.3
Hund13719 Selenicereus undatus HOM05D004964 ORTHO05D005918 6.0e-36 156.0 346 36.1
Lalb_Chr03g0040321 Lupinus albus HOM05D004964 ORTHO05D005918 7.8e-36 155.6 434 31.1
Pp3c7_7610 Physcomitrium patens HOM05D004964 ORTHO05D005918 7.8e-36 155.6 543 27.6
FvH4_6g01921 Fragaria vesca HOM05D004964 ORTHO05D005918 1.3e-35 154.8 439 30.3
CSS0014360 Camellia sinensis var. sinensis HOM05D004964 ORTHO05D005918 2.3e-35 154.1 457 30.6
QL03p029942 Quercus lobata HOM05D004964 ORTHO05D005918 2.3e-35 154.1 385 32.7
Oeu016533.1 Olea europaea HOM05D004964 ORTHO05D005918 3.0e-35 153.7 329 37.1
arahy.Tifrunner.gnm1.ann1.J3Q9FM Arachis hypogaea HOM05D004964 ORTHO05D005918 5.1e-35 152.9 404 30.9
TPR.G33137 Trifolium pratense HOM05D004964 ORTHO05D005918 5.1e-35 152.9 443 32.3
Ciclev10020293m.g Citrus clementina HOM05D004964 ORTHO05D005918 6.6e-35 152.5 437 31.8
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 8.7e-35 152.1 439 30.1
Ca_14064_v3 Cicer arietinum L. HOM05D004964 ORTHO05D005918 1.1e-34 151.8 448 31.9
Phvul.010G051000 Phaseolus vulgaris HOM05D004964 ORTHO05D005918 1.1e-34 151.8 400 32.0
AagrBONN_evm.TU.Sc2ySwM_340.245 Anthoceros agrestis HOM05D004964 ORTHO05D005918 2.5e-34 150.6 340 34.1
VMungo0331G1958 Vigna mungo HOM05D004964 ORTHO05D005918 3.3e-34 150.2 401 30.9
QL03p029974 Quercus lobata HOM05D004964 ORTHO05D005918 4.3e-34 149.8 388 30.9
FAN14G5822 Fragaria x ananassa HOM05D004964 ORTHO05D005918 5.6e-34 149.4 420 31.9
Glyma.07G113400 Glycine max HOM05D004964 ORTHO05D005918 5.6e-34 149.4 401 31.9
arahy.Tifrunner.gnm1.ann1.H9CC2T Arachis hypogaea HOM05D004964 ORTHO05D005918 9.6e-34 148.7 336 32.7
AUR62023306 Chenopodium quinoa HOM05D004964 ORTHO05D005918 9.6e-34 148.7 374 32.4
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.2e-33 148.3 419 31.0
Lj3g0015193 Lotus japonicus HOM05D004964 ORTHO05D005918 1.2e-33 148.3 397 31.5
GSVIVG01023502001 Vitis vinifera HOM05D004964 ORTHO05D005918 1.2e-33 148.3 405 31.4
MBI07_g16903_MAGBIO Magnolia biondii HOM05D004964 ORTHO05D005918 2.1e-33 147.5 442 29.4
MELO3C008708.2 Cucumis melo HOM05D004964 ORTHO05D005918 2.8e-33 147.1 396 31.3
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 2.8e-33 147.1 442 30.1
MD04G1230400 Malus domestica HOM05D004964 ORTHO05D005918 3.6e-33 146.7 440 31.4
AUR62008995 Chenopodium quinoa HOM05D004964 ORTHO05D005918 4.7e-33 146.4 374 32.6
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 4.7e-33 146.4 419 30.8
Psat4g225120 Pisum sativum HOM05D004964 ORTHO05D005918 8.1e-33 145.6 406 32.0
Manes.08G139500 Manihot esculenta HOM05D004964 ORTHO05D005918 1.8e-32 144.4 438 31.1
Sed0000191 Sechium edule HOM05D004964 ORTHO05D005918 4.0e-32 143.3 439 29.2
Sc10g0001190 Simmondsia chinensis HOM05D004964 ORTHO05D005918 5.2e-32 142.9 429 29.8
Aqoxy5G02134 Aquilegia oxysepala HOM05D004964 ORTHO05D005918 6.9e-32 142.5 442 27.6
TPR.G17496 Trifolium pratense HOM05D004964 ORTHO05D005918 6.9e-32 142.5 435 30.3
QL03p030425 Quercus lobata HOM05D004964 ORTHO05D005918 9.0e-32 142.1 370 31.9
Solyc01g111410.3 Solanum lycopersicum HOM05D004964 ORTHO05D005918 9.0e-32 142.1 441 30.2
ATR0736G161 Amborella trichopoda HOM05D004964 ORTHO05D005918 1.2e-31 141.7 457 30.2
Cc02_g08800 Coffea canephora HOM05D004964 ORTHO05D005918 1.5e-31 141.4 333 35.7
Thecc.05G270700 Theobroma cacao HOM05D004964 ORTHO05D005918 1.5e-31 141.4 438 29.7
unitig_46.g18500 Utricularia gibba HOM05D004964 ORTHO05D005918 1.5e-31 141.4 321 34.3
unitig_47.g30763 Utricularia gibba HOM05D004964 ORTHO05D005918 1.5e-31 141.4 321 34.3
CAN.G588.60 Capsicum annuum HOM05D004964 ORTHO05D005918 2.0e-31 141.0 441 29.9
Sopen01g053470 Solanum pennellii HOM05D004964 ORTHO05D005918 5.8e-31 139.4 441 29.5
Aqoxy4G00649 Aquilegia oxysepala HOM05D004964 ORTHO05D005918 7.6e-31 139.0 442 27.6
Lj2A43G39 Lonicera japonica HOM05D004964 ORTHO05D005918 9.9e-31 138.7 429 30.8
TAR362G0358 Trochodendron aralioides HOM05D004964 ORTHO05D005918 9.9e-31 138.7 459 30.1
Pp3c11_21460 Physcomitrium patens HOM05D004964 ORTHO05D005918 1.3e-30 138.3 427 28.6
Medtr8g006785 Medicago truncatula HOM05D004964 ORTHO05D005918 2.2e-30 137.5 471 29.9
Duzib106G0302 Durio zibethinus HOM05D004964 ORTHO05D005918 2.9e-30 137.1 402 32.1
Mapoly0082s0051 Marchantia polymorpha HOM05D004964 ORTHO05D005918 2.9e-30 137.1 396 30.1
PGSC0003DMG401006195 Solanum tuberosum HOM05D004964 ORTHO05D005918 2.9e-30 137.1 441 29.5
A06p47210 Brassica napus HOM05D004964 ORTHO05D005918 6.4e-30 136.0 398 30.2
HanXRQChr07g0204481 Helianthus annuus HOM05D004964 ORTHO05D005918 6.4e-30 136.0 446 29.6
AL1G20790 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 1.4e-29 134.8 399 29.8
CANSAT01G0497 Cannabis sativa HOM05D004964 ORTHO05D005918 1.4e-29 134.8 362 30.1
Prupe.6G350300 Prunus persica HOM05D004964 ORTHO05D005918 1.4e-29 134.8 432 29.6
Atru.chr2.987 Acer truncatum HOM05D004964 ORTHO05D005918 1.9e-29 134.4 324 33.0
BcaC06g34559 Brassica carinata HOM05D004964 ORTHO05D005918 1.9e-29 134.4 396 29.5
C07p27180 Brassica napus HOM05D004964 ORTHO05D005918 1.9e-29 134.4 396 29.5
BolC7t43245H Brassica oleracea HOM05D004964 ORTHO05D005918 1.9e-29 134.4 396 29.5
BraA06t27592Z Brassica rapa HOM05D004964 ORTHO05D005918 1.9e-29 134.4 398 29.9
Migut.F00800 Erythranthe guttata HOM05D004964 ORTHO05D005918 2.4e-29 134.0 391 30.4
AT1G10095 Arabidopsis thaliana HOM05D004964 ORTHO05D005918 3.2e-29 133.7 397 29.2
Lsat_1_v5_gn_8_24860 Lactuca sativa HOM05D004964 ORTHO05D005918 5.4e-29 132.9 327 32.7
Cpa.g.sc162.40 Carica papaya HOM05D004964 ORTHO05D005918 7.1e-29 132.5 388 30.7
Eucgr.H04227 Eucalyptus grandis HOM05D004964 ORTHO05D005918 7.1e-29 132.5 322 33.9
Gorai.004G249200 Gossypium raimondii HOM05D004964 ORTHO05D005918 9.3e-29 132.1 396 30.8
Thhalv10000880m.g Eutrema salsugineum HOM05D004964 ORTHO05D005918 1.6e-28 131.3 392 31.1
Gohir.D08G234400 Gossypium hirsutum HOM05D004964 ORTHO05D005918 2.1e-28 131.0 396 30.6
CARHR010210 Cardamine hirsuta HOM05D004964 ORTHO05D005918 3.5e-28 130.2 380 29.5
HPP92_003061 Vanilla planifolia HOM05D004964 ORTHO05D005918 3.5e-28 130.2 403 29.0
EL10Ac2g04577 Beta vulgaris HOM05D004964 ORTHO05D005918 4.6e-28 129.8 371 31.3
AL1G47560 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 7.8e-28 129.0 373 32.2
A09p21080 Brassica napus HOM05D004964 ORTHO05D005918 1.0e-27 128.6 396 29.5
BcaC06g31621 Brassica carinata HOM05D004964 ORTHO05D005918 1.3e-27 128.3 391 29.4
Nn4g26424 Nelumbo nucifera HOM05D004964 ORTHO05D005918 1.7e-27 127.9 450 26.0
BraA09t37709Z Brassica rapa HOM05D004964 ORTHO05D005918 2.3e-27 127.5 396 29.5
Peaxi162Scf00407g00626 Petunia axillaris HOM05D004964 ORTHO05D005918 2.3e-27 127.5 426 29.3
vmacro10367 Vaccinium macrocarpon HOM05D004964 ORTHO05D005918 3.9e-27 126.7 308 36.4
DCAR_022832 Daucus carota HOM05D004964 ORTHO05D005918 6.6e-27 125.9 329 33.1
COL.COLO4_00075 Corchorus olitorius HOM05D004964 ORTHO05D005918 1.1e-26 125.2 253 36.4
Carub.0001s0952 Capsella rubella HOM05D004964 ORTHO05D005918 1.5e-26 124.8 401 29.4
BcaB07g30949 Brassica carinata HOM05D004964 ORTHO05D005918 1.9e-26 124.4 330 29.4
Sabra13G0043100 Salix brachista HOM05D004964 ORTHO05D005918 4.3e-26 123.2 367 30.2
CsaV3_2G009770 Cucumis sativus L. HOM05D004964 ORTHO05D005918 5.6e-26 122.9 314 30.9
Dinv18988 Davidia involucrata HOM05D004964 ORTHO05D005918 2.8e-25 120.6 307 35.5
SGA_v2.0_scaffold295G47511 Striga asiatica HOM05D004964 ORTHO05D005918 6.2e-25 119.4 398 30.4
FAN09G0282 Fragaria x ananassa HOM05D004964 ORTHO05D005918 8.1e-25 119.0 233 36.9
Sp2g09220 Schrenkiella parvula HOM05D004964 ORTHO05D005918 6.9e-24 115.9 330 28.8
ECA233G3630 Erigeron canadensis HOM05D004964 ORTHO05D005918 9.0e-24 115.5 361 27.7
PSO210G1919 Papaver somniferum HOM05D004964 ORTHO05D005918 9.0e-24 115.5 465 26.9
Zm00001eb229480 Zea mays HOM05D004964 ORTHO05D005918 2.0e-23 114.4 304 31.6
Potri.013G047100 Populus trichocarpa HOM05D004964 ORTHO05D005918 1.3e-22 111.7 226 33.2
Gohir.A08G217400 Gossypium hirsutum HOM05D004964 ORTHO05D005918 1.7e-22 111.3 334 31.1
SGA_v2.0_scaffold26G11247 Striga asiatica HOM05D004964 ORTHO05D005918 2.2e-22 110.9 310 29.7
CSS0038343 Camellia sinensis var. sinensis HOM05D004964 ORTHO05D005918 4.9e-22 109.8 397 29.2
QL03p030368 Quercus lobata HOM05D004964 ORTHO05D005918 6.4e-22 109.4 225 31.6
PSO210G0659 Papaver somniferum HOM05D004964 ORTHO05D005918 1.1e-21 108.6 351 29.3
AL1G47570 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 7.1e-21 105.9 365 29.0
Ah.10g037790 Amaranthus hybridus HOM05D004964 ORTHO05D005918 2.1e-20 104.4 369 28.2
Nitab4.5_0013387g0040 Nicotiana tabacum HOM05D004964 ORTHO05D005918 7.9e-20 102.4 346 30.3
AL1G20660 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 6.7e-19 99.4 214 35.5
CBR_g718 Chara braunii HOM05D004964 ORTHO05D005918 1.9e-18 97.8 429 27.7
Hma1.2p1_1512F.1_g287895 Hydrangea macrophylla HOM05D004964 ORTHO05D005918 1.9e-18 97.8 160 38.8
SGA_v2.0_scaffold177G39428 Striga asiatica HOM05D004964 ORTHO05D005918 2.5e-18 97.4 320 27.8
QL03p030280 Quercus lobata HOM05D004964 ORTHO05D005918 2.8e-17 94.0 211 31.8
Os01g0684800 Oryza sativa ssp. japonica HOM05D004964 ORTHO05D005918 1.4e-16 91.7 212 31.6
Aa31LG1G4780 Aethionema arabicum HOM05D004964 ORTHO05D005918 2.4e-16 90.9 154 39.6
CDE04G2937 Ceratophyllum demersum HOM05D004964 ORTHO05D005918 3.1e-16 90.5 191 36.1
MSTRG.14348 Avicennia marina HOM05D004964 ORTHO05D005918 6.9e-16 89.4 386 27.2
Nitab4.5_0005396g0030 Nicotiana tabacum HOM05D004964 ORTHO05D005918 2.0e-15 87.8 323 28.5
MD12G1248000 Malus domestica HOM05D004964 ORTHO05D005918 9.9e-15 85.5 275 27.6
C07p27190 Brassica napus HOM05D004964 ORTHO05D005918 2.1e-12 77.8 223 29.6
C09p26820 Brassica napus HOM05D004964 ORTHO05D005918 2.1e-12 77.8 128 35.2
BolC7t43246H Brassica oleracea HOM05D004964 ORTHO05D005918 2.1e-12 77.8 223 29.6
BcaC04g21837 Brassica carinata HOM05D004964 ORTHO05D005918 1.3e-11 75.1 123 35.8
SEGI_14565 Sequoiadendron giganteum HOM05D004964 ORTHO05D005918 3.0e-11 73.9 170 34.7
Haze_04422 Corylus avellana HOM05D004964 ORTHO05D005918 5.1e-11 73.2 179 31.3
MD12G1248600 Malus domestica HOM05D004964 ORTHO05D005918 1.1e-10 72.0 155 33.5
Hund12147 Selenicereus undatus HOM05D004964 ORTHO05D005918 2.1e-09 67.8 194 31.4
SEGI_33500 Sequoiadendron giganteum HOM05D004964 ORTHO05D005918 2.8e-09 67.4 100 43.0
CARHR222860 Cardamine hirsuta HOM05D004964 ORTHO05D005918 3.1e-08 63.9 247 26.3
SHI23132 Sapria himalayana HOM05D000024 ORTHO05D000007 4.5e-07 60.1 126 31.7
arahy.Tifrunner.gnm1.ann1.A28SEL Arachis hypogaea HOM05D000231 ORTHO05D005918 3.8e-06 57.0 71 42.3


User provided reference genes

Program Settings