Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO146G0145 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 4.9e-174 614.4 315 100.0
GSVIVG01008239001 Vitis vinifera HOM05D005975 ORTHO05D007373 1.4e-88 330.5 317 55.8
Peaxi162Scf00015g00726 Petunia axillaris HOM05D005975 ORTHO05D007373 7.1e-88 328.2 340 52.4
vmacro17674 Vaccinium macrocarpon HOM05D005975 ORTHO05D007373 4.6e-87 325.5 341 51.9
CAN.G438.116 Capsicum annuum HOM05D005975 ORTHO05D007373 2.3e-86 323.2 337 51.9
COL.COLO4_22722 Corchorus olitorius HOM05D005975 ORTHO05D007373 2.3e-86 323.2 339 53.4
Potri.015G049900 Populus trichocarpa HOM05D005975 ORTHO05D007373 2.3e-86 323.2 339 52.2
Solyc03g119750.4 Solanum lycopersicum HOM05D005975 ORTHO05D007373 3.9e-86 322.4 337 52.2
Actinidia31028 Actinidia chinensis HOM05D005975 ORTHO05D007373 6.6e-86 321.6 337 51.9
Potri.012G060200 Populus trichocarpa HOM05D005975 ORTHO05D007373 1.1e-85 320.9 339 51.3
Ah.11g047090 Amaranthus hybridus HOM05D005975 ORTHO05D007373 1.5e-85 320.5 340 51.2
Eucgr.B00701 Eucalyptus grandis HOM05D005975 ORTHO05D007373 1.5e-85 320.5 333 52.0
Ciclev10019197m.g Citrus clementina HOM05D005975 ORTHO05D007373 1.9e-85 320.1 342 52.9
Nitab4.5_0001599g0180 Nicotiana tabacum HOM05D005975 ORTHO05D007373 1.9e-85 320.1 337 51.0
Sopen03g038600 Solanum pennellii HOM05D005975 ORTHO05D007373 1.9e-85 320.1 337 51.9
PGSC0003DMG400005625 Solanum tuberosum HOM05D005975 ORTHO05D007373 1.9e-85 320.1 337 51.6
Atru.chr9.776 Acer truncatum HOM05D005975 ORTHO05D007373 2.5e-85 319.7 340 52.4
Mapoly0016s0160 Marchantia polymorpha HOM05D005975 ORTHO05D007373 3.3e-85 319.3 350 52.6
Gorai.007G007400 Gossypium raimondii HOM05D005975 ORTHO05D007373 4.3e-85 318.9 339 51.0
Haze_18619 Corylus avellana HOM05D005975 ORTHO05D007373 5.6e-85 318.5 334 52.4
SGA_v2.0_scaffold25G10981 Striga asiatica HOM05D005975 ORTHO05D007373 5.6e-85 318.5 323 52.3
Dinv38586 Davidia involucrata HOM05D005975 ORTHO05D007373 7.3e-85 318.2 339 52.5
Prupe.5G217600 Prunus persica HOM05D005975 ORTHO05D007373 1.2e-84 317.4 339 51.3
Sabra12G0043300 Salix brachista HOM05D005975 ORTHO05D007373 1.2e-84 317.4 334 51.2
Thecc.03G028700 Theobroma cacao HOM05D005975 ORTHO05D007373 1.6e-84 317.0 336 52.1
CiPaw.15G127100 Carya illinoinensis HOM05D005975 ORTHO05D007373 2.1e-84 316.6 342 51.8
Rhsim08G0136800 Rhododendron simsii HOM05D005975 ORTHO05D007373 2.1e-84 316.6 337 51.0
ClCG06G015000 Citrullus lanatus HOM05D005975 ORTHO05D007373 2.8e-84 316.2 338 53.3
Gohir.D11G006100 Gossypium hirsutum HOM05D005975 ORTHO05D007373 2.8e-84 316.2 339 50.4
Glyma.06G210800 Glycine max HOM05D005975 ORTHO05D007373 3.6e-84 315.8 338 50.3
QL10p022556 Quercus lobata HOM05D005975 ORTHO05D007373 4.7e-84 315.5 338 50.6
Sed0024013 Sechium edule HOM05D005975 ORTHO05D007373 4.7e-84 315.5 334 53.6
Phvul.009G200500 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 6.2e-84 315.1 339 51.0
Gohir.A11G007000 Gossypium hirsutum HOM05D005975 ORTHO05D007373 8.1e-84 314.7 339 50.7
Hma1.2p1_0592F.1_g185285 Hydrangea macrophylla HOM05D005975 ORTHO05D007373 8.1e-84 314.7 336 51.5
Lalb_Chr12g0197601 Lupinus albus HOM05D005975 ORTHO05D007373 1.1e-83 314.3 340 50.3
ECA232G0421 Erigeron canadensis HOM05D005975 ORTHO05D007373 1.4e-83 313.9 337 52.8
MBI19_g38388_MAGBIO Magnolia biondii HOM05D005975 ORTHO05D007373 1.4e-83 313.9 343 52.2
Duzib205G1016 Durio zibethinus HOM05D005975 ORTHO05D007373 1.8e-83 313.5 345 52.2
Lj1g0009400 Lotus japonicus HOM05D005975 ORTHO05D007373 2.4e-83 313.2 339 51.3
CSS0000913 Camellia sinensis var. sinensis HOM05D005975 ORTHO05D007373 3.1e-83 312.8 333 51.4
MD06G1211600 Malus domestica HOM05D005975 ORTHO05D007373 3.1e-83 312.8 335 50.7
EL10Ac5g11254 Beta vulgaris HOM05D005975 ORTHO05D007373 4.0e-83 312.4 339 50.1
AUR62032193 Chenopodium quinoa HOM05D005975 ORTHO05D007373 6.8e-83 311.6 340 51.5
MELO3C017289.2 Cucumis melo HOM05D005975 ORTHO05D007373 6.8e-83 311.6 338 52.4
MD14G1222100 Malus domestica HOM05D005975 ORTHO05D007373 6.8e-83 311.6 336 52.1
VMungo1309G0041 Vigna mungo HOM05D005975 ORTHO05D007373 6.8e-83 311.6 333 50.5
AUR62036958 Chenopodium quinoa HOM05D005975 ORTHO05D007373 8.9e-83 311.2 340 51.8
Ca_23135_v3 Cicer arietinum L. HOM05D005975 ORTHO05D007373 8.9e-83 311.2 342 50.6
CsaV3_1G003650 Cucumis sativus L. HOM05D005975 ORTHO05D007373 8.9e-83 311.2 338 52.1
Pp3c12_18170 Physcomitrium patens HOM05D005975 ORTHO05D007373 8.9e-83 311.2 339 51.3
Psat1g024880 Pisum sativum HOM05D005975 ORTHO05D007373 8.9e-83 311.2 343 50.7
SEGI_09157 Sequoiadendron giganteum HOM05D005975 ORTHO05D007373 8.9e-83 311.2 338 50.9
Cpa.g.sc549.1 Carica papaya HOM05D005975 ORTHO05D007373 1.2e-82 310.8 333 51.1
Cc04_g07500 Coffea canephora HOM05D005975 ORTHO05D007373 1.2e-82 310.8 337 50.4
HanXRQChr09g0269781 Helianthus annuus HOM05D005975 ORTHO05D007373 1.5e-82 310.5 337 51.9
RcHm_v2.0_Chr7g0184651 Rosa chinensis HOM05D005975 ORTHO05D007373 1.5e-82 310.5 340 50.0
Aqoxy3G03906 Aquilegia oxysepala HOM05D005975 ORTHO05D007373 2.0e-82 310.1 336 50.3
Oeu024324.1 Olea europaea HOM05D005975 ORTHO05D007373 2.6e-82 309.7 351 48.4
TAR622G0473 Trochodendron aralioides HOM05D005975 ORTHO05D007373 2.6e-82 309.7 340 48.5
Hund10002 Selenicereus undatus HOM05D005975 ORTHO05D007373 3.4e-82 309.3 343 50.1
ATR0753G136 Amborella trichopoda HOM05D005975 ORTHO05D007373 4.4e-82 308.9 335 50.4
arahy.Tifrunner.gnm1.ann1.1K5T8S Arachis hypogaea HOM05D005975 ORTHO05D007373 5.8e-82 308.5 341 51.3
Migut.I00389 Erythranthe guttata HOM05D005975 ORTHO05D007373 5.8e-82 308.5 331 50.2
Glyma.04G152200 Glycine max HOM05D005975 ORTHO05D007373 7.6e-82 308.1 340 49.7
Hund02524 Selenicereus undatus HOM05D005975 ORTHO05D007373 7.6e-82 308.1 341 50.7
TAR374G1293 Trochodendron aralioides HOM05D005975 ORTHO05D007373 7.6e-82 308.1 339 49.3
VMungo1215G0359 Vigna mungo HOM05D005975 ORTHO05D007373 7.6e-82 308.1 342 49.7
Manes.05G139300 Manihot esculenta HOM05D005975 ORTHO05D007373 9.9e-82 307.8 339 50.4
MSTRG.22940 Avicennia marina HOM05D005975 ORTHO05D007373 1.7e-81 307.0 336 50.0
Pp3c4_11450 Physcomitrium patens HOM05D005975 ORTHO05D007373 2.9e-81 306.2 339 52.2
AagrBONN_evm.TU.Sc2ySwM_228.4839 Anthoceros agrestis HOM05D005975 ORTHO05D007373 3.8e-81 305.8 345 50.4
Lj9A429T54 Lonicera japonica HOM05D005975 ORTHO05D007373 3.8e-81 305.8 327 51.1
PGR083G1175 Punica granatum HOM05D005975 ORTHO05D007373 4.9e-81 305.4 340 48.8
Zm00001eb011310 Zea mays HOM05D005975 ORTHO05D007373 4.9e-81 305.4 339 51.3
PSO063G1047 Papaver somniferum HOM05D005975 ORTHO05D007373 8.4e-81 304.7 340 50.0
Phvul.003G176900 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 8.4e-81 304.7 339 49.3
Nitab4.5_0000410g0070 Nicotiana tabacum HOM05D005975 ORTHO05D007373 1.1e-80 304.3 322 51.2
TPR.G10356 Trifolium pratense HOM05D005975 ORTHO05D007373 1.1e-80 304.3 343 49.0
THA.LOC104808292 Tarenaya hassleriana HOM05D005975 ORTHO05D007373 1.9e-80 303.5 344 50.6
FvH4_5g12680 Fragaria vesca HOM05D005975 ORTHO05D007373 5.4e-80 302.0 336 49.7
AL2G33760 Arabidopsis lyrata HOM05D005975 ORTHO05D007373 9.2e-80 301.2 336 50.6
FAN18G3396 Fragaria x ananassa HOM05D005975 ORTHO05D007373 9.2e-80 301.2 336 49.7
PSO782G2585 Papaver somniferum HOM05D005975 ORTHO05D007373 9.2e-80 301.2 338 49.4
Sc10g0009550 Simmondsia chinensis HOM05D005975 ORTHO05D007373 9.2e-80 301.2 340 49.4
FAN08G0232 Fragaria x ananassa HOM05D005975 ORTHO05D007373 1.6e-79 300.4 336 49.4
FAN04G2679 Fragaria x ananassa HOM05D005975 ORTHO05D007373 4.6e-79 298.9 337 49.3
FAN13G1844 Fragaria x ananassa HOM05D005975 ORTHO05D007373 4.6e-79 298.9 336 48.8
Os03g0259700 Oryza sativa ssp. japonica HOM05D005975 ORTHO05D007373 1.0e-78 297.7 341 50.4
Lsat_1_v5_gn_3_10441 Lactuca sativa HOM05D005975 ORTHO05D007373 3.0e-78 296.2 320 51.9
DCAR_015134 Daucus carota HOM05D005975 ORTHO05D007373 5.1e-78 295.4 338 50.0
Glyma.17G121100 Glycine max HOM05D005975 ORTHO05D007373 6.6e-78 295.0 344 48.3
unitig_22.g6248 Utricularia gibba HOM05D005975 ORTHO05D007373 6.6e-78 295.0 331 52.0
AT1G73930 Arabidopsis thaliana HOM05D005975 ORTHO05D007373 1.5e-77 293.9 336 49.7
Carub.0002s2070 Capsella rubella HOM05D005975 ORTHO05D007373 1.5e-77 293.9 336 50.3
BcaC03g15468 Brassica carinata HOM05D005975 ORTHO05D007373 3.3e-77 292.7 342 49.4
A02p18950 Brassica napus HOM05D005975 ORTHO05D007373 3.3e-77 292.7 342 49.4
BolC2t09180H Brassica oleracea HOM05D005975 ORTHO05D007373 3.3e-77 292.7 342 49.4
BraA02t06937Z Brassica rapa HOM05D005975 ORTHO05D007373 3.3e-77 292.7 342 49.4
Sp5g29130 Schrenkiella parvula HOM05D005975 ORTHO05D007373 4.3e-77 292.4 336 49.7
C02p31490 Brassica napus HOM05D005975 ORTHO05D007373 2.8e-76 289.7 342 49.1
CARHR067040 Cardamine hirsuta HOM05D005975 ORTHO05D007373 2.8e-76 289.7 336 50.0
Thhalv10018286m.g Eutrema salsugineum HOM05D005975 ORTHO05D007373 1.1e-75 287.7 336 49.4
BcaB05g24819 Brassica carinata HOM05D005975 ORTHO05D007373 1.4e-75 287.3 342 49.1
SMO367G0788 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 1.4e-75 287.3 326 50.6
CBR_g30105 Chara braunii HOM05D005975 ORTHO05D007373 2.1e-71 273.5 371 43.9
TAR622G1340 Trochodendron aralioides HOM05D005975 ORTHO05D007373 3.1e-67 259.6 312 46.8
Sabra15G0077800 Salix brachista HOM05D005975 ORTHO05D007373 4.9e-65 252.3 303 48.2
Aa31LG4G4220 Aethionema arabicum HOM05D005975 ORTHO05D007373 3.0e-62 243.0 337 43.9
arahy.Tifrunner.gnm1.ann1.CEL6SJ Arachis hypogaea HOM05D005975 ORTHO05D007373 1.8e-59 233.8 270 50.0
HPP92_016580 Vanilla planifolia HOM05D005975 ORTHO05D007373 1.2e-58 231.1 179 62.0
Glyma.05G013100 Glycine max HOM05D005975 ORTHO05D007373 2.2e-57 226.9 337 43.0
SalBow5G4970 Salvia bowleyana HOM05D005975 ORTHO05D007373 3.8e-57 226.1 279 46.6
CDE05G1454 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 6.0e-47 192.2 247 46.2
Zm00001eb237870 Zea mays HOM05D005975 ORTHO05D007373 3.3e-45 186.4 184 51.6
BcaB05g24817 Brassica carinata HOM05D005975 ORTHO05D007373 1.4e-43 181.0 220 48.2
Zm00001eb078910 Zea mays HOM05D005975 ORTHO05D007373 6.3e-36 155.6 117 65.0
Cre14.g633500 Chlamydomonas reinhardtii HOM05D005975 ORTHO05D007373 1.0e-25 121.7 292 34.9
CDE05G3359 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 2.3e-22 110.5 185 40.0
Nn3g17719 Nelumbo nucifera HOM05D005975 ORTHO05D007373 1.4e-19 101.3 100 51.0
CDE05G0573 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 7.7e-18 95.5 73 56.2
HPP92_016579 Vanilla planifolia HOM05D005975 ORTHO05D007373 7.7e-18 95.5 87 59.8
PSO074G0001 Papaver somniferum HOM05D005975 ORTHO05D007373 3.8e-09 66.6 49 57.1


User provided reference genes

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