Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO146G0068 Selaginella moellendorffii HOM05D007056 ORTHO05D008278 6.9e-136 487.3 239 100.0
Atru.chr8.1149 Acer truncatum HOM05D007056 ORTHO05D008278 1.7e-89 333.2 215 72.6
Aqoxy2G00097 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 2.8e-89 332.4 231 68.4
Gohir.D04G089300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 2.4e-88 329.3 216 71.8
Gorai.012G099400 Gossypium raimondii HOM05D007056 ORTHO05D008278 2.4e-88 329.3 216 71.8
ATR0598G297 Amborella trichopoda HOM05D007056 ORTHO05D008278 1.6e-87 326.6 193 77.7
Duzib093G0790 Durio zibethinus HOM05D007056 ORTHO05D008278 1.6e-87 326.6 212 72.6
Eucgr.K01848 Eucalyptus grandis HOM05D007056 ORTHO05D008278 1.6e-87 326.6 212 74.5
Lj1g0028043 Lotus japonicus HOM05D007056 ORTHO05D008278 2.0e-87 326.2 230 69.6
Thecc.05G174400 Theobroma cacao HOM05D007056 ORTHO05D008278 2.0e-87 326.2 211 73.0
Lalb_Chr18g0048001 Lupinus albus HOM05D007056 ORTHO05D008278 5.9e-87 324.7 193 76.7
Ciclev10012466m.g Citrus clementina HOM05D007056 ORTHO05D008278 7.7e-87 324.3 208 73.6
Nn2g15729 Nelumbo nucifera HOM05D007056 ORTHO05D008278 7.7e-87 324.3 193 77.2
RcHm_v2.0_Chr3g0479281 Rosa chinensis HOM05D007056 ORTHO05D008278 1.0e-86 323.9 209 73.2
FAN09G4108 Fragaria x ananassa HOM05D007056 ORTHO05D008278 1.7e-86 323.2 227 69.2
Os02g0774500 Oryza sativa ssp. japonica HOM05D007056 ORTHO05D008278 1.7e-86 323.2 208 73.6
Zm00001eb256530 Zea mays HOM05D007056 ORTHO05D008278 1.7e-86 323.2 193 78.2
Prupe.7G080200 Prunus persica HOM05D007056 ORTHO05D008278 2.3e-86 322.8 233 67.8
PGR142G3072 Punica granatum HOM05D007056 ORTHO05D008278 2.9e-86 322.4 193 77.2
EL10Ac3g06891 Beta vulgaris HOM05D007056 ORTHO05D008278 6.5e-86 321.2 239 65.7
Ca_08534_v3 Cicer arietinum L. HOM05D007056 ORTHO05D008278 3.3e-85 318.9 193 75.1
arahy.Tifrunner.gnm1.ann1.DK1M71 Arachis hypogaea HOM05D007056 ORTHO05D008278 4.2e-85 318.5 228 66.7
Lj2A365G87 Lonicera japonica HOM05D007056 ORTHO05D008278 4.2e-85 318.5 193 76.7
Pp3c1_41490 Physcomitrium patens HOM05D007056 ORTHO05D008278 4.2e-85 318.5 192 75.5
Glyma.19G149400 Glycine max HOM05D007056 ORTHO05D008278 5.5e-85 318.2 228 67.5
MBI19_g17420_MAGBIO Magnolia biondii HOM05D007056 ORTHO05D008278 5.5e-85 318.2 194 77.3
A05p37300 Brassica napus HOM05D007056 ORTHO05D008278 7.2e-85 317.8 227 67.4
BraA05t22526Z Brassica rapa HOM05D007056 ORTHO05D008278 7.2e-85 317.8 226 66.8
arahy.Tifrunner.gnm1.ann1.LTU6F0 Arachis hypogaea HOM05D007056 ORTHO05D008278 9.5e-85 317.4 203 73.4
QL07p024320 Quercus lobata HOM05D007056 ORTHO05D008278 9.5e-85 317.4 206 72.3
QL07p024358 Quercus lobata HOM05D007056 ORTHO05D008278 9.5e-85 317.4 206 72.3
VMungo1383G1827 Vigna mungo HOM05D007056 ORTHO05D008278 9.5e-85 317.4 226 68.1
CANSAT64G0992 Cannabis sativa HOM05D007056 ORTHO05D008278 1.2e-84 317.0 215 70.7
Actinidia38590 Actinidia chinensis HOM05D007056 ORTHO05D008278 1.6e-84 316.6 234 66.7
SEGI_25756 Sequoiadendron giganteum HOM05D007056 ORTHO05D008278 2.8e-84 315.8 204 72.1
Dinv16370 Davidia involucrata HOM05D007056 ORTHO05D008278 3.6e-84 315.5 193 75.1
Phvul.001G143900 Phaseolus vulgaris HOM05D007056 ORTHO05D008278 3.6e-84 315.5 197 74.6
Potri.016G060000 Populus trichocarpa HOM05D007056 ORTHO05D008278 3.6e-84 315.5 193 75.1
AagrBONN_evm.TU.Sc2ySwM_344.2853 Anthoceros agrestis HOM05D007056 ORTHO05D008278 4.7e-84 315.1 193 76.2
BcaC05g29295 Brassica carinata HOM05D007056 ORTHO05D008278 6.1e-84 314.7 227 67.4
Medtr7g093540 Medicago truncatula HOM05D007056 ORTHO05D008278 6.1e-84 314.7 194 74.7
AT3G12040 Arabidopsis thaliana HOM05D007056 ORTHO05D008278 1.0e-83 313.9 223 65.9
Sp3g10270 Schrenkiella parvula HOM05D007056 ORTHO05D008278 1.0e-83 313.9 226 67.3
BcaB06g25552 Brassica carinata HOM05D007056 ORTHO05D008278 1.4e-83 313.5 234 65.4
Cpa.g.sc85.61 Carica papaya HOM05D007056 ORTHO05D008278 1.4e-83 313.5 222 66.2
CsaV3_3G038650 Cucumis sativus L. HOM05D007056 ORTHO05D008278 1.4e-83 313.5 193 74.6
FAN14G2508 Fragaria x ananassa HOM05D007056 ORTHO05D008278 1.4e-83 313.5 227 67.4
TAR369G0080 Trochodendron aralioides HOM05D007056 ORTHO05D008278 1.4e-83 313.5 203 70.9
Mapoly0003s0280 Marchantia polymorpha HOM05D007056 ORTHO05D008278 1.8e-83 313.2 193 74.6
COL.COLO4_05956 Corchorus olitorius HOM05D007056 ORTHO05D008278 2.3e-83 312.8 211 70.1
HPP92_004381 Vanilla planifolia HOM05D007056 ORTHO05D008278 2.3e-83 312.8 198 72.7
CSS0008084 Camellia sinensis var. sinensis HOM05D007056 ORTHO05D008278 3.0e-83 312.4 193 75.6
Thhalv10021378m.g Eutrema salsugineum HOM05D007056 ORTHO05D008278 3.0e-83 312.4 226 66.4
TWI77G0776 Tripterygium wilfordii HOM05D007056 ORTHO05D008278 3.0e-83 312.4 196 74.0
Cfa020149 Carpinus fangiana HOM05D007056 ORTHO05D008278 4.0e-83 312.0 193 75.6
CiPaw.09G028900 Carya illinoinensis HOM05D007056 ORTHO05D008278 4.0e-83 312.0 193 74.1
MD14G1054600 Malus domestica HOM05D007056 ORTHO05D008278 5.2e-83 311.6 208 72.6
Nitab4.5_0001079g0030 Nicotiana tabacum HOM05D007056 ORTHO05D008278 5.2e-83 311.6 193 74.6
Carub.0003s1138 Capsella rubella HOM05D007056 ORTHO05D008278 6.8e-83 311.2 233 65.2
HanXRQChr01g0010031 Helianthus annuus HOM05D007056 ORTHO05D008278 6.8e-83 311.2 225 66.7
C05p55770 Brassica napus HOM05D007056 ORTHO05D008278 1.5e-82 310.1 228 67.1
BolC5t34244H Brassica oleracea HOM05D007056 ORTHO05D008278 1.5e-82 310.1 228 67.1
AUR62011999 Chenopodium quinoa HOM05D007056 ORTHO05D008278 2.0e-82 309.7 235 63.8
SGA_v2.0_scaffold69G23055 Striga asiatica HOM05D007056 ORTHO05D008278 2.0e-82 309.7 227 65.2
THA.LOC104809936 Tarenaya hassleriana HOM05D007056 ORTHO05D008278 2.6e-82 309.3 205 69.3
Ah.04g152820 Amaranthus hybridus HOM05D007056 ORTHO05D008278 3.4e-82 308.9 194 73.7
CARHR086600 Cardamine hirsuta HOM05D007056 ORTHO05D008278 3.4e-82 308.9 204 71.1
CAN.G128.50 Capsicum annuum HOM05D007056 ORTHO05D008278 4.4e-82 308.5 193 75.1
AL3G23650 Arabidopsis lyrata HOM05D007056 ORTHO05D008278 5.7e-82 308.1 223 65.5
Sabra16G0062800 Salix brachista HOM05D007056 ORTHO05D008278 7.5e-82 307.8 193 74.1
Cc06_g15700 Coffea canephora HOM05D007056 ORTHO05D008278 1.3e-81 307.0 193 72.5
AUR62015338 Chenopodium quinoa HOM05D007056 ORTHO05D008278 1.7e-81 306.6 237 63.3
Aa31sc80G100 Aethionema arabicum HOM05D007056 ORTHO05D008278 3.7e-81 305.4 218 66.5
Solyc10g080560.2 Solanum lycopersicum HOM05D007056 ORTHO05D008278 3.7e-81 305.4 193 73.6
PGSC0003DMG400023706 Solanum tuberosum HOM05D007056 ORTHO05D008278 3.7e-81 305.4 193 73.6
unitig_27.g25110 Utricularia gibba HOM05D007056 ORTHO05D008278 6.3e-81 304.7 188 72.3
CDE06G2434 Ceratophyllum demersum HOM05D007056 ORTHO05D008278 2.4e-80 302.8 232 59.9
Sopen10g031100 Solanum pennellii HOM05D007056 ORTHO05D008278 2.4e-80 302.8 193 73.1
DCAR_019779 Daucus carota HOM05D007056 ORTHO05D008278 5.4e-80 301.6 227 64.8
Rhsim04G0094900 Rhododendron simsii HOM05D007056 ORTHO05D008278 9.2e-80 300.8 190 73.2
Lsat_1_v5_gn_5_165300 Lactuca sativa HOM05D007056 ORTHO05D008278 4.5e-79 298.5 195 71.3
GSVIVG01033475001 Vitis vinifera HOM05D007056 ORTHO05D008278 2.3e-78 296.2 220 65.5
TPR.G35780 Trifolium pratense HOM05D007056 ORTHO05D008278 3.8e-78 295.4 192 72.9
Peaxi162Scf00249g01221 Petunia axillaris HOM05D007056 ORTHO05D008278 5.0e-78 295.0 193 72.0
Aqoxy3G01855 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 2.6e-74 282.7 235 61.3
Psat3g067120 Pisum sativum HOM05D007056 ORTHO05D008278 5.0e-70 268.5 165 74.5
Hund24814 Selenicereus undatus HOM05D007056 ORTHO05D008278 5.0e-70 268.5 194 68.6
BcaB06g25551 Brassica carinata HOM05D007056 ORTHO05D008278 8.6e-70 267.7 164 75.0
PSO541G5037 Papaver somniferum HOM05D007056 ORTHO05D008278 1.5e-69 266.9 192 67.2
CBR_g48019 Chara braunii HOM05D000019 ORTHO05D000002 4.3e-69 265.4 189 66.7
PSO675G9168 Papaver somniferum HOM05D007056 ORTHO05D008278 5.6e-69 265.0 192 66.7
ECA248G2501 Erigeron canadensis HOM05D007056 ORTHO05D008278 8.0e-68 261.2 169 72.2
ECA248G2516 Erigeron canadensis HOM05D007056 ORTHO05D008278 8.9e-67 257.7 161 72.0
vmacro22110 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 3.5e-63 245.7 291 47.1
FvH4_6g21980 Fragaria vesca HOM05D007056 ORTHO05D008278 6.0e-63 245.0 177 67.8
Oeu024494.3 Olea europaea HOM05D007056 ORTHO05D008278 3.0e-62 242.7 228 56.6
Sed0027134 Sechium edule HOM05D007056 ORTHO05D008278 4.7e-60 235.3 142 78.9
Gohir.A04G057300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 6.8e-51 204.9 145 69.7
Psat3g067080 Pisum sativum HOM05D007056 ORTHO05D008278 2.9e-49 199.5 123 78.0
ECA248G3402 Erigeron canadensis HOM05D000009 ORTHO05D000008 2.1e-47 193.4 121 72.7
Migut.J01851 Erythranthe guttata HOM05D007056 ORTHO05D008278 3.0e-46 189.5 119 70.6
Psat3g067040 Pisum sativum HOM05D007056 ORTHO05D008278 9.6e-45 184.5 182 56.0
ClCG10G017660 Citrullus lanatus HOM05D007056 ORTHO05D008278 3.6e-44 182.6 142 65.5
FAN02G0430 Fragaria x ananassa HOM05D007056 ORTHO05D008278 9.3e-40 167.9 133 63.9
Manes.08G042900 Manihot esculenta HOM05D007056 ORTHO05D008278 1.6e-39 167.2 101 78.2
Sc13g0002370 Simmondsia chinensis HOM05D007056 ORTHO05D008278 4.6e-39 165.6 100 77.0
MELO3C009610.2 Cucumis melo HOM05D007056 ORTHO05D008278 2.4e-35 153.3 193 46.1
PRCOL_00003183 Prasinoderma coloniale HOM05D007056 ORTHO05D008278 2.0e-34 150.2 214 43.9
Nitab4.5_0001440g0050 Nicotiana tabacum HOM05D007056 ORTHO05D008278 2.4e-32 143.3 94 68.1
Haze_20013 Corylus avellana HOM05D007056 ORTHO05D008278 2.1e-28 130.2 416 27.4
Hma1.2p1_0645F.1_g194860 Hydrangea macrophylla HOM05D007056 ORTHO05D008278 5.3e-27 125.6 71 76.1
ECA233G2032 Erigeron canadensis HOM05D007056 ORTHO05D008278 4.2e-24 115.9 76 68.4
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 2.1e-23 113.6 72 70.8
vmacro22990 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 2.1e-07 60.5 36 69.4


User provided reference genes

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