Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO146G0054 Selaginella moellendorffii HOM05D007498 ORTHO05D009384 1.4e-157 559.7 298 100.0
Pp3c17_21590 Physcomitrium patens HOM05D007498 ORTHO05D009384 3.3e-87 325.9 293 58.0
Mapoly0005s0243 Marchantia polymorpha HOM05D007498 ORTHO05D009384 5.1e-80 302.0 293 55.6
AagrBONN_evm.TU.Sc2ySwM_344.4295 Anthoceros agrestis HOM05D007498 ORTHO05D009384 3.2e-50 203.0 293 42.0
SEGI_23048 Sequoiadendron giganteum HOM05D007498 ORTHO05D009384 2.1e-49 200.3 299 38.8
ATR0059G023 Amborella trichopoda HOM05D007498 ORTHO05D009384 3.6e-41 172.9 304 37.5
MBI19_g41387_MAGBIO Magnolia biondii HOM05D007498 ORTHO05D009384 4.7e-41 172.6 294 35.4
Dinv08726 Davidia involucrata HOM05D007498 ORTHO05D009384 2.3e-35 153.7 295 33.9
TAR629G3061 Trochodendron aralioides HOM05D007498 ORTHO05D009384 1.1e-34 151.4 294 34.4
CiPaw.03G155900 Carya illinoinensis HOM05D007498 ORTHO05D009384 7.3e-34 148.7 294 35.4
PSO541G2474 Papaver somniferum HOM05D007498 ORTHO05D009384 1.2e-33 147.9 306 33.3
GSVIVG01030496001 Vitis vinifera HOM05D007498 ORTHO05D009384 1.2e-33 147.9 293 33.1
CANSAT64G1398 Cannabis sativa HOM05D007498 ORTHO05D009384 1.6e-33 147.5 297 31.6
AL3G43270 Arabidopsis lyrata HOM05D007498 ORTHO05D009384 2.8e-33 146.7 295 33.2
Lj6g0022389 Lotus japonicus HOM05D007498 ORTHO05D009384 3.6e-33 146.4 297 32.0
Nn1g03383 Nelumbo nucifera HOM05D007498 ORTHO05D009384 3.6e-33 146.4 291 33.0
Cc05_g03070 Coffea canephora HOM05D007498 ORTHO05D009384 4.7e-33 146.0 293 31.4
Lsat_1_v5_gn_7_95281 Lactuca sativa HOM05D007498 ORTHO05D009384 4.7e-33 146.0 287 32.4
Actinidia13735 Actinidia chinensis HOM05D007498 ORTHO05D009384 1.0e-32 144.8 294 33.0
Sp3g24210 Schrenkiella parvula HOM05D007498 ORTHO05D009384 1.0e-32 144.8 294 32.7
CSS0038240 Camellia sinensis var. sinensis HOM05D007498 ORTHO05D009384 1.8e-32 144.1 295 31.5
Hma1.2p1_0445F.1_g154420 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 1.8e-32 144.1 295 31.5
Hma1.2p1_2381F.1_g320980 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 1.8e-32 144.1 295 31.5
BcaC01g03153 Brassica carinata HOM05D007498 ORTHO05D009384 2.3e-32 143.7 294 33.7
A03p44690 Brassica napus HOM05D007498 ORTHO05D009384 2.3e-32 143.7 294 34.0
Ciclev10015493m.g Citrus clementina HOM05D007498 ORTHO05D009384 2.3e-32 143.7 299 32.4
Aa31LG8G11370 Aethionema arabicum HOM05D007498 ORTHO05D009384 3.0e-32 143.3 290 34.1
HanXRQChr12g0373631 Helianthus annuus HOM05D007498 ORTHO05D009384 4.0e-32 142.9 287 32.8
TWI18G0826 Tripterygium wilfordii HOM05D007498 ORTHO05D009384 5.2e-32 142.5 293 33.1
C03p55520 Brassica napus HOM05D007498 ORTHO05D009384 6.8e-32 142.1 294 33.7
Lsat_1_v5_gn_5_123880 Lactuca sativa HOM05D007498 ORTHO05D009384 8.9e-32 141.7 289 32.2
Actinidia09741 Actinidia chinensis HOM05D007498 ORTHO05D009384 1.5e-31 141.0 294 31.6
AT2G05755 Arabidopsis thaliana HOM05D007498 ORTHO05D009384 1.5e-31 141.0 295 32.5
Sc21g0001170 Simmondsia chinensis HOM05D007498 ORTHO05D009384 1.5e-31 141.0 298 33.2
Nitab4.5_0006063g0010 Nicotiana tabacum HOM05D007498 ORTHO05D009384 2.0e-31 140.6 298 30.9
BcaB08g34508 Brassica carinata HOM05D007498 ORTHO05D009384 2.6e-31 140.2 294 33.0
Sopen05g026100 Solanum pennellii HOM05D007498 ORTHO05D009384 3.4e-31 139.8 288 31.6
Manes.12G070200 Manihot esculenta HOM05D007498 ORTHO05D009384 5.7e-31 139.0 293 33.4
Nitab4.5_0000019g0370 Nicotiana tabacum HOM05D007498 ORTHO05D009384 5.7e-31 139.0 294 31.3
Peaxi162Scf00100g01524 Petunia axillaris HOM05D007498 ORTHO05D009384 5.7e-31 139.0 294 30.3
Phvul.006G012811 Phaseolus vulgaris HOM05D007498 ORTHO05D009384 5.7e-31 139.0 296 31.1
CARHR103340 Cardamine hirsuta HOM05D007498 ORTHO05D009384 7.5e-31 138.7 268 33.2
Carub.0003s2696 Capsella rubella HOM05D007498 ORTHO05D009384 1.3e-30 137.9 295 32.5
Solyc05g042050.4 Solanum lycopersicum HOM05D007498 ORTHO05D009384 1.3e-30 137.9 288 31.6
Prupe.3G211200 Prunus persica HOM05D007498 ORTHO05D009384 2.2e-30 137.1 291 32.6
Eucgr.A01096 Eucalyptus grandis HOM05D007498 ORTHO05D009384 3.7e-30 136.3 294 34.0
MD17G1103400 Malus domestica HOM05D007498 ORTHO05D009384 1.1e-29 134.8 292 31.5
PSO675G1300 Papaver somniferum HOM05D007498 ORTHO05D009384 1.1e-29 134.8 335 30.7
BolC3t17828H Brassica oleracea HOM05D000228 ORTHO05D001122 1.8e-29 134.0 260 34.6
COL.COLO4_21864 Corchorus olitorius HOM05D007498 ORTHO05D009384 2.4e-29 133.7 297 31.6
Thecc.01G181300 Theobroma cacao HOM05D007498 ORTHO05D009384 2.4e-29 133.7 296 29.7
FAN05G5059 Fragaria x ananassa HOM05D007498 ORTHO05D009384 3.2e-29 133.3 294 31.6
PGR042G1731 Punica granatum HOM05D007498 ORTHO05D009384 4.1e-29 132.9 297 31.3
BraA03t13603Z Brassica rapa HOM05D007498 ORTHO05D009384 5.4e-29 132.5 260 34.6
CsaV3_6G037690 Cucumis sativus L. HOM05D007498 ORTHO05D009384 5.4e-29 132.5 292 32.2
Gohir.D07G193500 Gossypium hirsutum HOM05D007498 ORTHO05D009384 5.4e-29 132.5 296 31.4
Gorai.001G216600 Gossypium raimondii HOM05D007498 ORTHO05D009384 7.0e-29 132.1 297 31.0
QL08p030918 Quercus lobata HOM05D007498 ORTHO05D009384 7.0e-29 132.1 293 32.1
MD09G1113300 Malus domestica HOM05D007498 ORTHO05D009384 1.2e-28 131.3 293 31.4
TPR.G34497 Trifolium pratense HOM05D007498 ORTHO05D009384 2.0e-28 130.6 296 31.1
CDE07G0657 Ceratophyllum demersum HOM05D000323 ORTHO05D009384 3.5e-28 129.8 238 34.9
Medtr3g080260 Medicago truncatula HOM05D007498 ORTHO05D009384 4.6e-28 129.4 293 29.4
Gohir.A07G187000 Gossypium hirsutum HOM05D007498 ORTHO05D009384 1.7e-27 127.5 296 30.1
THA.LOC104815344 Tarenaya hassleriana HOM05D007498 ORTHO05D009384 1.7e-27 127.5 263 32.3
FvH4_6g42420 Fragaria vesca HOM05D007498 ORTHO05D009384 3.0e-27 126.7 292 30.8
Sabra14G0119400 Salix brachista HOM05D007498 ORTHO05D009384 3.0e-27 126.7 311 31.2
Aqoxy1G04193 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 3.9e-27 126.3 297 30.3
Thhalv10002583m.g Eutrema salsugineum HOM05D007498 ORTHO05D009384 5.0e-27 125.9 281 31.3
Sed0020195 Sechium edule HOM05D007498 ORTHO05D009384 1.9e-26 124.0 298 30.2
RcHm_v2.0_Chr2g0158311 Rosa chinensis HOM05D007498 ORTHO05D009384 3.6e-25 119.8 290 28.6
Rhsim09G0054300 Rhododendron simsii HOM05D007498 ORTHO05D009384 4.7e-25 119.4 342 29.2
Rhsim06G0166900 Rhododendron simsii HOM05D007498 ORTHO05D009384 6.2e-25 119.0 342 29.2
vmacro12166 Vaccinium macrocarpon HOM05D007498 ORTHO05D009384 1.0e-24 118.2 293 30.4
Lj1A780G53 Lonicera japonica HOM05D007498 ORTHO05D009384 1.8e-24 117.5 246 30.9
Gorai.001G095600 Gossypium raimondii HOM05D007498 ORTHO05D009384 1.3e-22 111.3 272 30.1
ECA234G3795 Erigeron canadensis HOM05D007498 ORTHO05D009384 2.4e-21 107.1 197 32.5
Cre07.g355550 Chlamydomonas reinhardtii HOM05D024201 ORTHO05D009384 4.1e-21 106.3 331 29.0
ClCG07G002420 Citrullus lanatus HOM05D007498 ORTHO05D009384 5.4e-21 105.9 283 29.3
Gohir.D07G089300 Gossypium hirsutum HOM05D007498 ORTHO05D009384 7.8e-20 102.1 243 29.6
MELO3C014431.2 Cucumis melo HOM05D007498 ORTHO05D009384 1.3e-19 101.3 316 26.3
Aqoxy1G02942 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 2.3e-19 100.5 195 33.8
Gohir.A07G083200 Gossypium hirsutum HOM05D007498 ORTHO05D009384 3.0e-19 100.1 264 28.8
DCAR_019260 Daucus carota HOM05D007498 ORTHO05D001133 1.6e-17 94.4 169 30.8
Potri.014G157700 Populus trichocarpa HOM05D007498 ORTHO05D009384 8.9e-16 88.6 138 39.1
Ca_16281_v3 Cicer arietinum L. HOM05D007498 ORTHO05D009384 4.4e-15 86.3 269 27.1
Psat5g106880 Pisum sativum HOM05D007498 ORTHO05D009384 7.5e-15 85.5 194 29.4
Duzib138G1101 Durio zibethinus HOM05D007498 ORTHO05D009384 2.2e-14 84.0 281 26.0
FAN09G2551 Fragaria x ananassa HOM05D007498 ORTHO05D009384 1.6e-12 77.8 219 28.3
Cfa025227 Carpinus fangiana HOM05D007498 ORTHO05D009384 6.6e-11 72.4 349 24.9
Cre06.g286200 Chlamydomonas reinhardtii HOM05D024201 ORTHO05D009384 1.9e-10 70.9 284 25.4
Cpa.g.sc132.15 Carica papaya HOM05D007498 ORTHO05D009384 7.3e-10 68.9 154 29.9
Cre01.g012400 Chlamydomonas reinhardtii HOM05D024201 ORTHO05D009384 7.3e-10 68.9 308 25.3
MCO01G560 Micromonas commoda HOM05D007498 ORTHO05D009384 8.1e-09 65.5 220 25.9
MCO16G002 Micromonas commoda HOM05D024201 ORTHO05D009384 1.5e-07 61.2 248 26.6
Cre02.g079650 Chlamydomonas reinhardtii HOM05D024201 ORTHO05D009384 2.0e-07 60.8 324 23.5


User provided reference genes

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