Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO146G0045 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 0.0e+00 1585.5 869 100.0
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 3.9e-35 154.5 178 52.8
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 1.7e-19 102.4 180 37.2
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 3.0e-19 101.7 183 37.2
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 5.1e-19 100.9 190 37.4
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 6.6e-19 100.5 191 36.6
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 6.6e-19 100.5 183 36.6
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 8.6e-19 100.1 198 35.9
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 1.1e-18 99.8 189 36.5
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 1.5e-18 99.4 191 36.1
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 1.5e-18 99.4 195 34.9
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 1.5e-18 99.4 190 35.8
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 1.9e-18 99.0 188 38.3
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 1.9e-18 99.0 194 34.5
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 2.5e-18 98.6 190 37.9
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 3.3e-18 98.2 190 35.3
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 3.3e-18 98.2 190 35.3
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 3.3e-18 98.2 191 36.1
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 3.3e-18 98.2 190 33.7
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 4.3e-18 97.8 189 34.9
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 4.3e-18 97.8 187 36.4
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 5.6e-18 97.4 199 34.7
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 7.3e-18 97.1 193 35.8
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 7.3e-18 97.1 186 35.5
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 7.3e-18 97.1 190 35.3
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 7.3e-18 97.1 184 33.7
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 7.3e-18 97.1 181 34.8
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 9.5e-18 96.7 191 34.0
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 9.5e-18 96.7 184 34.2
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 9.5e-18 96.7 193 36.3
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 1.2e-17 96.3 178 35.4
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 1.2e-17 96.3 195 32.3
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 1.2e-17 96.3 190 34.7
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 1.6e-17 95.9 184 36.4
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 1.6e-17 95.9 190 35.3
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 2.1e-17 95.5 189 35.4
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 2.1e-17 95.5 192 32.3
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 2.1e-17 95.5 200 34.0
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 2.8e-17 95.1 185 36.2
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 4.7e-17 94.4 186 34.4
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 4.7e-17 94.4 180 34.4
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 6.2e-17 94.0 197 34.0
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 8.1e-17 93.6 190 35.8
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 8.1e-17 93.6 185 34.1
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 1.1e-16 93.2 195 33.8
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 1.1e-16 93.2 192 36.5
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 1.1e-16 93.2 201 34.3
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 1.1e-16 93.2 195 33.8
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 1.4e-16 92.8 188 34.0
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 1.8e-16 92.4 184 33.7
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 1.8e-16 92.4 195 32.8
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 1.8e-16 92.4 195 33.3
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 2.3e-16 92.0 192 34.4
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 2.3e-16 92.0 187 34.2
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 3.1e-16 91.7 197 33.5
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 5.2e-16 90.9 196 36.2
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 6.8e-16 90.5 188 33.0
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 6.8e-16 90.5 191 35.6
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 8.9e-16 90.1 191 33.0
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 1.2e-15 89.7 196 35.7
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 1.2e-15 89.7 184 33.7
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 1.2e-15 89.7 191 35.6
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 1.5e-15 89.4 189 33.9
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 1.5e-15 89.4 186 34.4
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 2.0e-15 89.0 190 34.2
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 2.0e-15 89.0 58 67.2
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 2.0e-15 89.0 189 33.9
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 3.4e-15 88.2 190 32.6
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 3.4e-15 88.2 186 32.8
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 9.9e-15 86.7 186 34.9
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 9.9e-15 86.7 189 33.9
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 9.9e-15 86.7 184 34.2
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 2.2e-14 85.5 186 34.4
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 2.2e-14 85.5 186 34.4
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 4.9e-14 84.3 210 31.9
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 6.4e-14 84.0 186 32.8
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 1.9e-13 82.4 187 31.0
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 2.4e-13 82.0 218 31.2
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 3.5e-12 78.2 200 30.5
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 1.3e-11 76.3 163 33.7
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 6.6e-11 73.9 159 34.0
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 8.6e-11 73.6 158 33.5
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 1.1e-10 73.2 162 33.3
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 1.1e-10 73.2 151 33.8
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 1.5e-10 72.8 157 36.3
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 1.5e-10 72.8 55 52.7
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 1.5e-10 72.8 229 27.1
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 3.3e-10 71.6 159 33.3
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 3.3e-10 71.6 166 33.7
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 4.3e-10 71.2 157 35.7
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 9.6e-10 70.1 168 30.4
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 9.6e-10 70.1 162 32.1
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 1.6e-09 69.3 166 34.9
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 2.4e-08 65.5 158 31.6
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 2.4e-08 65.5 151 33.8
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 3.1e-08 65.1 158 32.9
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 4.0e-08 64.7 187 29.9
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 2.0e-07 62.4 162 30.2
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 5.8e-07 60.8 150 33.3
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 1.3e-06 59.7 153 30.7
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 2.2e-06 58.9 149 33.6
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 2.9e-06 58.5 149 34.2
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 2.9e-06 58.5 155 31.0
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 3.8e-06 58.2 165 32.1
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 4.9e-06 57.8 149 32.9


User provided reference genes

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