Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO146G0018 Selaginella moellendorffii HOM05D006346 ORTHO05D007910 0.0e+00 1216.8 616 100.0
Pp3c23_14180 Physcomitrium patens HOM05D006346 ORTHO05D007910 1.0e-191 674.1 616 56.8
Mapoly0021s0085 Marchantia polymorpha HOM05D006346 ORTHO05D007910 2.6e-187 659.4 616 56.5
AagrBONN_evm.TU.Sc2ySwM_344.1120 Anthoceros agrestis HOM05D006346 ORTHO05D007910 4.5e-187 658.7 624 56.2
Nn8g39991 Nelumbo nucifera HOM05D006346 ORTHO05D007910 1.3e-186 657.1 617 55.1
Nitab4.5_0003551g0040 Nicotiana tabacum HOM05D006346 ORTHO05D007910 2.2e-186 656.4 619 56.1
TWI34G0405 Tripterygium wilfordii HOM05D006346 ORTHO05D007910 4.9e-186 655.2 621 55.1
Sopen07g001980 Solanum pennellii HOM05D006346 ORTHO05D007910 3.2e-185 652.5 619 55.4
CAN.G160.15 Capsicum annuum HOM05D006346 ORTHO05D007910 9.3e-185 651.0 611 55.8
Lj9A719T56 Lonicera japonica HOM05D006346 ORTHO05D007910 1.6e-184 650.2 609 56.3
Os05g0411200 Oryza sativa ssp. japonica HOM05D006346 ORTHO05D007910 2.1e-184 649.8 616 54.2
Potri.018G103700 Populus trichocarpa HOM05D006346 ORTHO05D007910 2.7e-184 649.4 619 54.3
THA.LOC104803912 Tarenaya hassleriana HOM05D006346 ORTHO05D007910 2.7e-184 649.4 616 56.0
COL.COLO4_23953 Corchorus olitorius HOM05D006346 ORTHO05D007910 3.5e-184 649.0 619 54.6
Gohir.A04G059826 Gossypium hirsutum HOM05D006346 ORTHO05D007910 4.6e-184 648.7 618 54.9
PSO782G0769 Papaver somniferum HOM05D006346 ORTHO05D007910 4.6e-184 648.7 600 55.3
QL02p093888 Quercus lobata HOM05D006346 ORTHO05D007910 4.6e-184 648.7 620 54.2
Aqoxy7G03359 Aquilegia oxysepala HOM05D006346 ORTHO05D007910 6.0e-184 648.3 600 56.2
CSS0042716 Camellia sinensis var. sinensis HOM05D006346 ORTHO05D007910 6.0e-184 648.3 612 55.4
Atru.chr7.350 Acer truncatum HOM05D006346 ORTHO05D007910 7.9e-184 647.9 621 55.1
AUR62028356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 7.9e-184 647.9 611 55.6
Cfa020798 Carpinus fangiana HOM05D006346 ORTHO05D007910 1.3e-183 647.1 618 54.4
arahy.Tifrunner.gnm1.ann1.ID3JIZ Arachis hypogaea HOM05D006346 ORTHO05D007910 3.0e-183 646.0 629 55.0
HPP92_020605 Vanilla planifolia HOM05D006346 ORTHO05D007910 5.1e-183 645.2 618 53.4
Gorai.012G099000 Gossypium raimondii HOM05D006346 ORTHO05D007910 6.7e-183 644.8 618 54.5
ECA234G1139 Erigeron canadensis HOM05D006346 ORTHO05D007910 8.7e-183 644.4 608 55.1
Nitab4.5_0002611g0100 Nicotiana tabacum HOM05D006346 ORTHO05D007910 1.1e-182 644.0 621 55.1
PSO063G0785 Papaver somniferum HOM05D006346 ORTHO05D007910 1.1e-182 644.0 600 54.8
CANSAT11G2498 Cannabis sativa HOM05D006346 ORTHO05D007910 1.9e-182 643.3 625 53.3
Ciclev10007623m.g Citrus clementina HOM05D006346 ORTHO05D007910 1.9e-182 643.3 619 54.1
Thhalv10024548m.g Eutrema salsugineum HOM05D006346 ORTHO05D007910 2.5e-182 642.9 619 56.2
Thecc.09G152100 Theobroma cacao HOM05D006346 ORTHO05D007910 2.5e-182 642.9 622 54.0
Gohir.D04G088700 Gossypium hirsutum HOM05D006346 ORTHO05D007910 4.3e-182 642.1 618 54.4
AT4G30720 Arabidopsis thaliana HOM05D006346 ORTHO05D007910 5.6e-182 641.7 618 55.7
BcaNung02744 Brassica carinata HOM05D006346 ORTHO05D007910 5.6e-182 641.7 613 56.8
C07p58190 Brassica napus HOM05D006346 ORTHO05D007910 5.6e-182 641.7 613 56.8
BolC7t46278H Brassica oleracea HOM05D006346 ORTHO05D007910 7.4e-182 641.3 614 56.7
Cc06_g14630 Coffea canephora HOM05D006346 ORTHO05D007910 7.4e-182 641.3 616 55.4
Dinv42829 Davidia involucrata HOM05D006346 ORTHO05D007910 7.4e-182 641.3 633 53.4
Dinv43271 Davidia involucrata HOM05D006346 ORTHO05D007910 7.4e-182 641.3 633 53.4
Zm00001eb288040 Zea mays HOM05D006346 ORTHO05D007910 1.6e-181 640.2 605 53.9
BcaNung01563 Brassica carinata HOM05D006346 ORTHO05D007910 2.8e-181 639.4 624 55.8
EL10Ac8g18923 Beta vulgaris HOM05D006346 ORTHO05D007910 4.8e-181 638.6 625 54.2
Hma1.2p1_0028F.1_g017690 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 4.8e-181 638.6 611 54.7
Hund08940 Selenicereus undatus HOM05D006346 ORTHO05D007910 4.8e-181 638.6 641 53.2
HanXRQChr10g0313691 Helianthus annuus HOM05D006346 ORTHO05D007910 8.1e-181 637.9 608 55.1
Sed0021167 Sechium edule HOM05D006346 ORTHO05D007910 8.1e-181 637.9 631 53.2
Sp7g28630 Schrenkiella parvula HOM05D006346 ORTHO05D007910 1.1e-180 637.5 618 55.8
BraA03t15070Z Brassica rapa HOM05D006346 ORTHO05D007910 1.4e-180 637.1 613 56.3
Prupe.7G265700 Prunus persica HOM05D006346 ORTHO05D007910 1.8e-180 636.7 619 53.6
A03p60280 Brassica napus HOM05D006346 ORTHO05D007910 2.4e-180 636.3 613 56.1
AL7G21400 Arabidopsis lyrata HOM05D006346 ORTHO05D007910 3.1e-180 636.0 617 55.6
FvH4_1g00650 Fragaria vesca HOM05D006346 ORTHO05D007910 4.0e-180 635.6 620 53.7
CsaV3_2G007650 Cucumis sativus L. HOM05D006346 ORTHO05D007910 5.3e-180 635.2 631 52.8
vmacro16782 Vaccinium macrocarpon HOM05D006346 ORTHO05D007910 1.5e-179 633.6 610 54.1
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 2.0e-179 633.3 614 54.1
PGR102G0252 Punica granatum HOM05D006346 ORTHO05D007910 2.0e-179 633.3 622 54.0
FAN26G0534 Fragaria x ananassa HOM05D006346 ORTHO05D007910 2.6e-179 632.9 620 53.5
MSTRG.6156 Avicennia marina HOM05D006346 ORTHO05D007910 3.4e-179 632.5 614 53.4
Phvul.003G072700 Phaseolus vulgaris HOM05D006346 ORTHO05D007910 3.4e-179 632.5 611 54.2
FAN28G1995 Fragaria x ananassa HOM05D006346 ORTHO05D007910 4.5e-179 632.1 620 53.4
Medtr8g467050 Medicago truncatula HOM05D006346 ORTHO05D007910 4.5e-179 632.1 610 53.9
Rhsim01G0026600 Rhododendron simsii HOM05D006346 ORTHO05D007910 7.6e-179 631.3 611 54.2
Lalb_Chr08g0234231 Lupinus albus HOM05D006346 ORTHO05D007910 1.3e-178 630.6 601 54.7
Carub.0007s0978 Capsella rubella HOM05D006346 ORTHO05D007910 1.7e-178 630.2 618 55.0
CiPaw.15G165500 Carya illinoinensis HOM05D006346 ORTHO05D007910 2.2e-178 629.8 617 54.0
Lj6g0013256 Lotus japonicus HOM05D006346 ORTHO05D007910 2.2e-178 629.8 616 54.4
Sabra18G0089100 Salix brachista HOM05D006346 ORTHO05D007910 2.9e-178 629.4 663 50.8
RcHm_v2.0_Chr2g0085271 Rosa chinensis HOM05D006346 ORTHO05D007910 6.5e-178 628.2 622 52.9
Aa31LG2G19630 Aethionema arabicum HOM05D006346 ORTHO05D007910 5.5e-177 625.2 616 55.2
ClCG02G014350 Citrullus lanatus HOM05D006346 ORTHO05D007910 7.1e-177 624.8 647 51.5
Haze_19155 Corylus avellana HOM05D006346 ORTHO05D007910 2.1e-176 623.2 649 51.3
GSVIVG01008451001 Vitis vinifera HOM05D006346 ORTHO05D007910 2.7e-176 622.9 594 54.4
Glyma.07G102300 Glycine max HOM05D006346 ORTHO05D007910 6.0e-176 621.7 622 52.9
Migut.J01382 Erythranthe guttata HOM05D006346 ORTHO05D007910 1.0e-175 620.9 612 54.4
SGA_v2.0_scaffold45G17017 Striga asiatica HOM05D006346 ORTHO05D007910 1.8e-175 620.2 637 53.4
Ca_22901_v3 Cicer arietinum L. HOM05D006346 ORTHO05D007910 3.9e-175 619.0 610 53.3
ATR0739G030 Amborella trichopoda HOM05D006346 ORTHO05D007910 6.7e-175 618.2 573 55.0
Lsat_1_v5_gn_5_89421 Lactuca sativa HOM05D006346 ORTHO05D007910 2.8e-173 612.8 606 54.0
Actinidia38309 Actinidia chinensis HOM05D006346 ORTHO05D007910 3.1e-172 609.4 569 55.9
CDE12G0948 Ceratophyllum demersum HOM05D006346 ORTHO05D007910 2.2e-170 603.2 599 53.9
Solyc07g005870.3 Solanum lycopersicum HOM05D006346 ORTHO05D007910 2.2e-170 603.2 600 54.5
Peaxi162Scf00401g00218 Petunia axillaris HOM05D006346 ORTHO05D007910 6.5e-170 601.7 600 54.3
MELO3C004121.2 Cucumis melo HOM05D006346 ORTHO05D007910 1.9e-169 600.1 641 50.9
FAN23G2716 Fragaria x ananassa HOM05D006346 ORTHO05D007910 4.2e-169 599.0 635 50.6
Oeu052219.3 Olea europaea HOM05D006346 ORTHO05D007910 3.6e-168 595.9 650 50.0
SalBow1G6401 Salvia bowleyana HOM05D006346 ORTHO05D007910 7.9e-168 594.7 550 55.8
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 2.8e-165 586.3 609 51.9
Ah.09g228750 Amaranthus hybridus HOM05D006346 ORTHO05D007910 1.4e-161 573.9 603 50.4
arahy.Tifrunner.gnm1.ann1.VMKR8Z Arachis hypogaea HOM05D006346 ORTHO05D007910 5.5e-161 572.0 574 53.8
MD02G1005300 Malus domestica HOM05D006346 ORTHO05D007910 8.8e-159 564.7 564 52.1
Sc14g0000950 Simmondsia chinensis HOM05D006346 ORTHO05D007910 5.0e-154 548.9 555 52.4
Psat4g134640 Pisum sativum HOM05D006346 ORTHO05D007910 5.2e-151 538.9 545 52.1
Manes.14G142800 Manihot esculenta HOM05D006346 ORTHO05D007910 2.5e-145 520.0 514 53.5
PRCOL_00000449 Prasinoderma coloniale HOM05D006346 ORTHO05D007910 8.0e-136 488.4 593 47.9
Cre17.g744997 Chlamydomonas reinhardtii HOM05D006346 ORTHO05D007910 1.0e-130 471.5 713 40.1
MCO14G279 Micromonas commoda HOM05D006346 ORTHO05D007910 1.4e-124 451.1 481 52.2
Cpa.g.sc46.182 Carica papaya HOM05D006346 ORTHO05D007910 4.4e-110 402.9 377 55.2
TPR.G10032 Trifolium pratense HOM05D006346 ORTHO05D007910 2.2e-109 400.6 1197 28.0
Glyma.04G155100 Glycine max HOM05D006346 ORTHO05D007910 2.5e-105 387.1 379 53.0
Hma1.2p1_0028F.1_g017700 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 1.4e-103 381.3 388 51.8
Eucgr.C02507 Eucalyptus grandis HOM05D006346 ORTHO05D007910 6.4e-93 345.9 334 53.3
TAR383G0381 Trochodendron aralioides HOM05D006346 ORTHO05D007910 2.1e-88 330.9 353 51.0
VMungo0251G1020 Vigna mungo HOM05D006346 ORTHO05D007910 2.9e-77 293.9 250 58.4
TAR383G0466 Trochodendron aralioides HOM05D006346 ORTHO05D007910 6.7e-66 256.1 202 61.9
CAN.G160.19 Capsicum annuum HOM05D006346 ORTHO05D007910 9.6e-65 252.3 409 40.6
PGSC0003DMG400011203 Solanum tuberosum HOM05D006346 ORTHO05D007910 1.1e-57 228.8 181 63.5
AUR62025356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 8.2e-56 222.6 237 51.1
Eucgr.C02508 Eucalyptus grandis HOM05D006346 ORTHO05D007910 1.4e-55 221.9 248 48.4
AUR62025355 Chenopodium quinoa HOM05D006346 ORTHO05D007910 3.4e-54 217.2 181 59.7
Actinidia24372 Actinidia chinensis HOM05D006346 ORTHO05D007910 1.0e-42 179.1 570 27.5
Cpa.g.sc46.183 Carica papaya HOM05D006346 ORTHO05D007910 5.7e-41 173.3 215 45.6
CARHR238600 Cardamine hirsuta HOM05D006346 ORTHO05D007910 1.1e-39 169.1 218 45.4
FAN23G0300 Fragaria x ananassa HOM05D006346 ORTHO05D007910 9.1e-39 166.0 130 60.0
SEGI_02941 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 1.9e-36 158.3 132 58.3
SEGI_30041 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 1.2e-27 129.0 103 60.2
Glyma.04G155150 Glycine max HOM05D006346 ORTHO05D007910 1.4e-26 125.6 144 47.2
CAN.G1961.3 Capsicum annuum HOM05D006346 ORTHO05D007910 2.3e-26 124.8 181 44.2
HanXRQChr01g0001911 Helianthus annuus HOM05D006346 ORTHO05D007910 5.0e-13 80.5 50 68.0
MD15G1149600 Malus domestica HOM05D006346 ORTHO05D007910 1.0e-10 72.8 137 34.3
SalBow1G2918 Salvia bowleyana HOM05D006346 ORTHO05D007910 2.6e-09 68.2 79 48.1
ECA238G2318 Erigeron canadensis HOM05D006346 ORTHO05D007910 2.4e-07 61.6 71 43.7
SEGI_23921 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 9.2e-07 59.7 69 42.0


User provided reference genes

Program Settings