Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO145G0291 Selaginella moellendorffii HOM05D002567 ORTHO05D007435 5.1e-182 641.0 327 100.0
Mapoly0007s0103 Marchantia polymorpha HOM05D002567 ORTHO05D007435 1.4e-115 420.2 327 65.7
THA.LOC104817512 Tarenaya hassleriana HOM05D002567 ORTHO05D007435 2.7e-106 389.4 329 60.8
Os03g0346800 Oryza sativa ssp. japonica HOM05D002567 ORTHO05D007435 4.6e-106 388.7 328 63.1
Phvul.007G165166 Phaseolus vulgaris HOM05D002567 ORTHO05D007435 4.6e-106 388.7 327 60.6
Hund05401 Selenicereus undatus HOM05D002567 ORTHO05D007435 3.9e-105 385.6 336 60.7
Glyma.02G153800 Glycine max HOM05D002567 ORTHO05D007435 6.6e-105 384.8 330 60.3
TAR365G0282 Trochodendron aralioides HOM05D002567 ORTHO05D007435 1.5e-104 383.6 329 60.8
Aqoxy5G00699 Aquilegia oxysepala HOM05D002567 ORTHO05D007435 4.3e-104 382.1 334 57.8
Sp4g29760 Schrenkiella parvula HOM05D002567 ORTHO05D007435 5.6e-104 381.7 329 58.4
VMungo0720G1827 Vigna mungo HOM05D002567 ORTHO05D007435 7.3e-104 381.3 329 59.3
TWI14G0999 Tripterygium wilfordii HOM05D002567 ORTHO05D007435 1.2e-103 380.6 329 59.3
Cc01_g20520 Coffea canephora HOM05D002567 ORTHO05D007435 1.6e-103 380.2 330 58.8
FvH4_c6g00110 Fragaria vesca HOM05D002567 ORTHO05D007435 2.8e-103 379.4 326 59.5
MD03G1284200 Malus domestica HOM05D002567 ORTHO05D007435 2.8e-103 379.4 326 60.1
Sc05g0004310 Simmondsia chinensis HOM05D002567 ORTHO05D007435 2.8e-103 379.4 330 59.4
Aa31LG1G29180 Aethionema arabicum HOM05D002567 ORTHO05D007435 4.7e-103 378.6 327 59.9
Manes.05G065800 Manihot esculenta HOM05D002567 ORTHO05D007435 6.2e-103 378.3 334 59.0
Lj5g0023248 Lotus japonicus HOM05D002567 ORTHO05D007435 8.1e-103 377.9 323 59.4
ATR0706G146 Amborella trichopoda HOM05D002567 ORTHO05D007435 1.1e-102 377.5 328 58.5
Thhalv10001431m.g Eutrema salsugineum HOM05D002567 ORTHO05D007435 1.1e-102 377.5 327 58.4
Glyma.10G020300 Glycine max HOM05D002567 ORTHO05D007435 1.1e-102 377.5 330 59.7
Nn5g30061 Nelumbo nucifera HOM05D002567 ORTHO05D007435 1.1e-102 377.5 327 58.7
Ciclev10019856m.g Citrus clementina HOM05D002567 ORTHO05D007435 1.4e-102 377.1 326 58.6
Pp3c14_1830 Physcomitrium patens HOM05D002567 ORTHO05D007435 1.8e-102 376.7 345 58.6
FvH4_c6g00080 Fragaria vesca HOM05D002567 ORTHO05D007435 6.8e-102 374.8 326 59.2
RcHm_v2.0_Chr6g0293181 Rosa chinensis HOM05D002567 ORTHO05D007435 6.8e-102 374.8 326 59.2
Sed0025005 Sechium edule HOM05D002567 ORTHO05D007435 6.8e-102 374.8 329 58.1
CARHR143220 Cardamine hirsuta HOM05D002567 ORTHO05D007435 8.9e-102 374.4 323 58.8
ClCG09G006190 Citrullus lanatus HOM05D002567 ORTHO05D007435 8.9e-102 374.4 335 58.5
TPR.G33972 Trifolium pratense HOM05D002567 ORTHO05D007435 8.9e-102 374.4 329 58.4
Thecc.01G294000 Theobroma cacao HOM05D002567 ORTHO05D007435 2.0e-101 373.2 328 59.1
BcaB01g03155 Brassica carinata HOM05D002567 ORTHO05D007435 4.4e-101 372.1 327 57.2
QL12p030562 Quercus lobata HOM05D002567 ORTHO05D007435 5.8e-101 371.7 329 58.1
PSO832G0331 Papaver somniferum HOM05D002567 ORTHO05D007435 9.9e-101 370.9 333 58.6
Pp3c10_1060 Physcomitrium patens HOM05D002567 ORTHO05D007435 9.9e-101 370.9 341 58.9
Lsat_1_v5_gn_5_189341 Lactuca sativa HOM05D002567 ORTHO05D007435 1.7e-100 370.2 323 57.6
AT2G47830 Arabidopsis thaliana HOM05D002567 ORTHO05D007435 2.9e-100 369.4 327 57.8
CANSAT25G3369 Cannabis sativa HOM05D002567 ORTHO05D007435 2.9e-100 369.4 329 58.1
AL4G47410 Arabidopsis lyrata HOM05D002567 ORTHO05D007435 3.7e-100 369.0 310 59.7
CiPaw.07G103700 Carya illinoinensis HOM05D002567 ORTHO05D007435 3.7e-100 369.0 338 58.0
Ca_10357_v3 Cicer arietinum L. HOM05D002567 ORTHO05D007435 3.7e-100 369.0 330 59.4
Migut.D00184 Erythranthe guttata HOM05D002567 ORTHO05D007435 4.9e-100 368.6 326 58.3
FAN20G2691 Fragaria x ananassa HOM05D002567 ORTHO05D007435 4.9e-100 368.6 344 56.4
Gorai.004G088200 Gossypium raimondii HOM05D002567 ORTHO05D007435 4.9e-100 368.6 325 59.1
HanXRQChr01g0001661 Helianthus annuus HOM05D002567 ORTHO05D007435 4.9e-100 368.6 326 57.7
Rhsim01G0282400 Rhododendron simsii HOM05D002567 ORTHO05D007435 4.9e-100 368.6 329 59.0
Lalb_Chr06g0163361 Lupinus albus HOM05D002567 ORTHO05D007435 6.4e-100 368.2 329 58.1
Actinidia24843 Actinidia chinensis HOM05D002567 ORTHO05D007435 8.3e-100 367.9 325 59.7
Sopen09g029600 Solanum pennellii HOM05D002567 ORTHO05D007435 1.1e-99 367.5 329 58.1
BraA03t11823Z Brassica rapa HOM05D002567 ORTHO05D007435 1.4e-99 367.1 330 56.7
Cpa.g.sc9.190 Carica papaya HOM05D002567 ORTHO05D007435 1.4e-99 367.1 330 58.8
Gohir.D08G083800 Gossypium hirsutum HOM05D002567 ORTHO05D007435 1.4e-99 367.1 327 59.3
C03p31100 Brassica napus HOM05D002567 ORTHO05D007435 1.9e-99 366.7 327 56.9
FAN24G0883 Fragaria x ananassa HOM05D002567 ORTHO05D007435 1.9e-99 366.7 344 56.1
A03p26080 Brassica napus HOM05D002567 ORTHO05D007435 2.4e-99 366.3 325 56.9
Eucgr.K03452 Eucalyptus grandis HOM05D002567 ORTHO05D007435 2.4e-99 366.3 329 58.1
BolC3t15458H Brassica oleracea HOM05D002567 ORTHO05D007435 5.4e-99 365.2 330 56.4
Medtr1g088870 Medicago truncatula HOM05D002567 ORTHO05D007435 5.4e-99 365.2 327 57.5
BcaC01g05016 Brassica carinata HOM05D002567 ORTHO05D007435 9.2e-99 364.4 330 56.4
Prupe.8G255700 Prunus persica HOM05D002567 ORTHO05D007435 9.2e-99 364.4 330 59.4
GSVIVG01010968001 Vitis vinifera HOM05D002567 ORTHO05D007435 9.2e-99 364.4 329 59.9
Gohir.A08G074500 Gossypium hirsutum HOM05D002567 ORTHO05D007435 1.2e-98 364.0 329 58.4
ECA248G3501 Erigeron canadensis HOM05D002567 ORTHO05D007435 2.7e-98 362.8 308 59.7
vmacro14988 Vaccinium macrocarpon HOM05D002567 ORTHO05D007435 3.5e-98 362.5 333 59.2
Cfa005987 Carpinus fangiana HOM05D002567 ORTHO05D007435 6.0e-98 361.7 330 58.8
COL.COLO4_07998 Corchorus olitorius HOM05D002567 ORTHO05D006538 7.8e-98 361.3 329 56.8
SalBow3G3633 Salvia bowleyana HOM05D002567 ORTHO05D007435 7.8e-98 361.3 330 57.6
PGSC0003DMG402011364 Solanum tuberosum HOM05D002567 ORTHO05D007435 7.8e-98 361.3 329 57.4
Haze_04858 Corylus avellana HOM05D002567 ORTHO05D006538 2.3e-97 359.8 321 57.6
CSS0004593 Camellia sinensis var. sinensis HOM05D002567 ORTHO05D007435 4.3e-96 355.5 333 57.7
CSS0018114 Camellia sinensis var. sinensis HOM05D002567 ORTHO05D007435 4.3e-96 355.5 333 57.7
PGR044G2614 Punica granatum HOM05D002567 ORTHO05D007435 4.3e-96 355.5 335 57.3
SGA_v2.0_scaffold1G00388 Striga asiatica HOM05D002567 ORTHO05D007435 5.6e-96 355.1 326 57.7
Nitab4.5_0001697g0140 Nicotiana tabacum HOM05D002567 ORTHO05D006538 4.7e-95 352.1 373 51.5
DCAR_012404 Daucus carota HOM05D002567 ORTHO05D007435 8.1e-95 351.3 333 58.0
Oeu046707.1 Olea europaea HOM05D002567 ORTHO05D007435 1.4e-94 350.5 335 56.1
FAN15G3695 Fragaria x ananassa HOM05D002567 ORTHO05D007435 1.8e-94 350.1 381 51.2
Lj2C1189T5 Lonicera japonica HOM05D002567 ORTHO05D007435 6.8e-94 348.2 346 54.9
AUR62043263 Chenopodium quinoa HOM05D002567 ORTHO05D007435 4.2e-91 339.0 326 57.1
AUR62033190 Chenopodium quinoa HOM05D002567 ORTHO05D007435 7.1e-91 338.2 305 59.0
Nitab4.5_0001447g0040 Nicotiana tabacum HOM05D002567 ORTHO05D007435 1.0e-89 334.3 332 54.5
Ah.15g093860 Amaranthus hybridus HOM05D002567 ORTHO05D007435 1.3e-87 327.4 326 54.9
HPP92_011840 Vanilla planifolia HOM05D002567 ORTHO05D007435 1.3e-87 327.4 296 56.4
Psat6g167000 Pisum sativum HOM05D002567 ORTHO05D007435 1.6e-87 327.0 295 58.0
Duzib133G1128 Durio zibethinus HOM05D002567 ORTHO05D007435 6.2e-87 325.1 323 53.6
CAN.G1562.6 Capsicum annuum HOM05D002567 ORTHO05D007435 2.4e-86 323.2 331 53.2
Dinv19731 Davidia involucrata HOM05D002567 ORTHO05D007435 4.5e-77 292.4 239 60.7
Hma1.2p1_0399F.1_g143930 Hydrangea macrophylla HOM05D002567 ORTHO05D007435 7.1e-75 285.0 236 61.0
MELO3C016044.2 Cucumis melo HOM05D002567 ORTHO05D007435 6.0e-74 282.0 320 51.9
Carub.0004s3055 Capsella rubella HOM05D002567 ORTHO05D007435 7.1e-67 258.5 223 56.5
CsaV3_7G028940 Cucumis sativus L. HOM05D002567 ORTHO05D007435 1.3e-63 247.7 192 60.9
AUR62033191 Chenopodium quinoa HOM05D002567 ORTHO05D007435 2.1e-63 246.9 258 52.3
Potri.002G209023 Populus trichocarpa HOM05D002567 ORTHO05D007435 7.6e-61 238.4 174 65.5
Solyc09g074740.2 Solanum lycopersicum HOM05D002567 ORTHO05D007435 6.1e-58 228.8 216 57.9
Sed0015917 Sechium edule HOM05D002567 ORTHO05D007435 7.9e-58 228.4 220 54.5
FAN19G1365 Fragaria x ananassa HOM05D002567 ORTHO05D007435 1.5e-56 224.2 206 58.3
Zm00001eb016640 Zea mays HOM05D002567 ORTHO05D007435 4.3e-56 222.6 162 64.2
Atru.chr5.1231 Acer truncatum HOM05D002567 ORTHO05D007435 7.4e-56 221.9 210 59.0
Peaxi162Scf00067g01814 Petunia axillaris HOM05D002567 ORTHO05D007435 2.4e-54 216.9 238 53.8
CDE02G2579 Ceratophyllum demersum HOM05D002567 ORTHO05D007435 1.9e-51 207.2 155 62.6
Cfa024758 Carpinus fangiana HOM05D002567 ORTHO05D007435 2.5e-35 153.7 308 34.4
Solyc09g074750.3 Solanum lycopersicum HOM05D002567 ORTHO05D007435 2.0e-32 144.1 123 55.3
MCO08G095 Micromonas commoda HOM05D002567 ORTHO05D007435 9.7e-32 141.7 345 30.7
Peaxi162Scf00067g01819 Petunia axillaris HOM05D002567 ORTHO05D007435 2.2e-31 140.6 118 55.9
PRCOL_00000973 Prasinoderma coloniale HOM05D002567 ORTHO05D007435 3.8e-28 129.8 303 30.7
Atru.chr5.1230 Acer truncatum HOM05D002567 ORTHO05D007435 4.0e-25 119.8 97 57.7
arahy.Tifrunner.gnm1.ann1.XK0FMC Arachis hypogaea HOM05D002567 ORTHO05D007435 9.1e-22 108.6 262 34.0
DCAR_017872 Daucus carota HOM05D002567 ORTHO05D007435 1.0e-20 105.1 72 66.7
CAN.G1349.13 Capsicum annuum HOM05D000586 ORTHO05D007435 5.0e-20 102.8 121 45.5
arahy.Tifrunner.gnm1.ann1.5I5ID6 Arachis hypogaea HOM05D002567 ORTHO05D007435 1.2e-18 98.2 91 57.1
arahy.Tifrunner.gnm1.ann1.L0WASJ Arachis hypogaea HOM05D002567 ORTHO05D007435 1.2e-18 98.2 91 57.1
CAN.G312.11 Capsicum annuum HOM05D000586 ORTHO05D003356 2.3e-17 94.0 65 66.2
CARHR055860 Cardamine hirsuta HOM05D002567 ORTHO05D007435 3.7e-15 86.7 92 50.0
CAN.G2.56 Capsicum annuum HOM05D000586 ORTHO05D003356 4.5e-13 79.7 59 64.4
RcHm_v2.0_Chr1g0365671 Rosa chinensis HOM05D000870 ORTHO05D000715 1.0e-12 78.6 306 21.9
Ciclev10006598m.g Citrus clementina HOM05D002567 ORTHO05D007435 2.9e-12 77.0 64 57.8
FvH4_7g21220 Fragaria vesca HOM05D000870 ORTHO05D000715 5.0e-12 76.3 306 21.6
FAN03G1595 Fragaria x ananassa HOM05D000870 ORTHO05D000715 5.0e-12 76.3 306 21.6
FAN06G4451 Fragaria x ananassa HOM05D000870 ORTHO05D000715 5.0e-12 76.3 306 21.6
Oeu025628.1 Olea europaea HOM05D000870 ORTHO05D000715 2.8e-10 70.5 306 20.9
HPP92_019816 Vanilla planifolia HOM05D000870 ORTHO05D000715 2.8e-10 70.5 301 22.6
Oeu011429.1 Olea europaea HOM05D002567 ORTHO05D007435 3.6e-10 70.1 48 70.8
CARHR220570 Cardamine hirsuta HOM05D002567 ORTHO05D007435 4.7e-10 69.7 95 42.1
Gohir.A05G299700 Gossypium hirsutum HOM05D000870 ORTHO05D000715 8.0e-10 68.9 295 20.3
Eucgr.G02893 Eucalyptus grandis HOM05D000870 ORTHO05D000715 1.0e-09 68.6 295 21.7
Sed0005782 Sechium edule HOM05D000870 ORTHO05D000715 1.0e-09 68.6 299 22.7
Actinidia21062 Actinidia chinensis HOM05D002567 ORTHO05D007435 1.4e-09 68.2 77 50.6
Gohir.D10G219700 Gossypium hirsutum HOM05D000870 ORTHO05D000715 1.4e-09 68.2 295 21.0
Gorai.011G246400 Gossypium raimondii HOM05D000870 ORTHO05D000715 1.4e-09 68.2 295 21.0
Lju857A2T20 Lonicera japonica HOM05D000870 ORTHO05D000715 1.4e-09 68.2 298 21.8
BraA04t18463Z Brassica rapa HOM05D000870 ORTHO05D000715 1.8e-09 67.8 306 21.6
TWI34G0364 Tripterygium wilfordii HOM05D000870 ORTHO05D000715 3.0e-09 67.0 298 22.1
DCAR_015229 Daucus carota HOM05D000870 ORTHO05D000715 5.2e-09 66.2 295 21.4
Hma1.2p1_0402F.1_g145051 Hydrangea macrophylla HOM05D000870 ORTHO05D000715 6.8e-09 65.9 295 20.7
Hma1.2p1_1483F.1_g286260 Hydrangea macrophylla HOM05D000870 ORTHO05D000715 6.8e-09 65.9 295 20.7
BcaC02g07403 Brassica carinata HOM05D000870 ORTHO05D000715 1.2e-08 65.1 295 21.0
Nitab4.5_0011064g0040 Nicotiana tabacum HOM05D002567 ORTHO05D007435 1.2e-08 65.1 105 38.1
AL463U10030 Arabidopsis lyrata HOM05D000870 ORTHO05D000715 1.5e-08 64.7 308 21.4
AL4G36840 Arabidopsis lyrata HOM05D000870 ORTHO05D000715 1.5e-08 64.7 308 21.4
A04p30450 Brassica napus HOM05D000870 ORTHO05D000715 1.5e-08 64.7 306 20.9
Dinv31409 Davidia involucrata HOM05D000870 ORTHO05D000715 1.5e-08 64.7 295 20.0
A05p06940 Brassica napus HOM05D000870 ORTHO05D000715 2.0e-08 64.3 308 21.4
GSVIVG01016640001 Vitis vinifera HOM05D000870 ORTHO05D000715 3.4e-08 63.5 297 20.9
Carub.0004s2152 Capsella rubella HOM05D000870 ORTHO05D000715 4.4e-08 63.2 308 21.1
TAR636G0054 Trochodendron aralioides HOM05D000870 ORTHO05D000715 5.7e-08 62.8 295 19.7
GSVIVG01036746001 Vitis vinifera HOM05D000870 ORTHO05D000715 5.7e-08 62.8 291 21.3
CARHR134320 Cardamine hirsuta HOM05D000870 ORTHO05D000715 7.5e-08 62.4 295 20.7
Cpa.g.sc32.73 Carica papaya HOM05D000870 ORTHO05D000715 1.7e-07 61.2 291 21.3
FAN10G3981 Fragaria x ananassa HOM05D000870 ORTHO05D000715 1.7e-07 61.2 306 20.3
SHI22537 Sapria himalayana HOM05D000870 ORTHO05D000715 2.9e-07 60.5 292 20.5
RcHm_v2.0_Chr5g0024041 Rosa chinensis HOM05D000870 ORTHO05D000715 3.7e-07 60.1 303 20.1
AUR62040423 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.4e-06 58.2 38 63.2
FvH4_3g14571 Fragaria vesca HOM05D000870 ORTHO05D000715 1.4e-06 58.2 290 20.7
FAN11G3865 Fragaria x ananassa HOM05D000870 ORTHO05D000715 1.4e-06 58.2 290 20.7
CDE11G0568 Ceratophyllum demersum HOM05D000870 ORTHO05D000715 1.8e-06 57.8 309 22.0
HanXRQChr13g0404201 Helianthus annuus HOM05D000870 ORTHO05D000715 1.8e-06 57.8 145 25.5
arahy.Tifrunner.gnm1.ann1.66ANXA Arachis hypogaea HOM05D002567 ORTHO05D007435 3.2e-06 57.0 37 62.2
FAN16G3420 Fragaria x ananassa HOM05D000870 ORTHO05D000715 3.2e-06 57.0 290 20.3
Psat5g111840 Pisum sativum HOM05D000870 ORTHO05D000715 3.2e-06 57.0 306 20.9
EL10Ac7g17491 Beta vulgaris HOM05D002567 ORTHO05D007435 4.1e-06 56.6 41 61.0
AUR62042552 Chenopodium quinoa HOM05D004615 ORTHO05D000004 4.1e-06 56.6 40 60.0
Lj6g0005550 Lotus japonicus HOM05D000870 ORTHO05D000715 7.0e-06 55.8 286 21.0
Cpa.g.sc32.72 Carica papaya HOM05D000870 ORTHO05D000715 9.2e-06 55.5 291 19.9


User provided reference genes

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