Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO145G0271 Selaginella moellendorffii HOM05D007029 ORTHO05D008258 5.8e-83 310.8 156 100.0
Mapoly0056s0124 Marchantia polymorpha HOM05D007029 ORTHO05D008258 2.1e-48 196.1 158 60.1
Nn8g40869 Nelumbo nucifera HOM05D007029 ORTHO05D008258 1.0e-47 193.7 158 56.3
Pp3c10_14520 Physcomitrium patens HOM05D007029 ORTHO05D008258 1.5e-46 189.9 158 56.3
PSO144G0063 Papaver somniferum HOM05D007029 ORTHO05D008258 2.1e-45 186.0 158 53.8
TAR626G0900 Trochodendron aralioides HOM05D007029 ORTHO05D008258 3.7e-45 185.3 159 56.6
Lj7A749T66 Lonicera japonica HOM05D007029 ORTHO05D008258 6.2e-45 184.5 159 56.6
Aqoxy7G02769 Aquilegia oxysepala HOM05D007029 ORTHO05D008258 1.1e-44 183.7 158 56.3
Gorai.010G123900 Gossypium raimondii HOM05D007029 ORTHO05D008258 1.1e-44 183.7 158 57.6
Psat6g031920 Pisum sativum HOM05D007029 ORTHO05D008258 1.1e-44 183.7 158 53.8
CARHR202690 Cardamine hirsuta HOM05D007029 ORTHO05D008258 1.8e-44 183.0 158 54.4
Glyma.14G132800 Glycine max HOM05D007029 ORTHO05D008258 2.4e-44 182.6 158 53.2
CSS0017002 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 4.0e-44 181.8 158 55.1
CSS0043998 Camellia sinensis var. sinensis HOM05D007029 ORTHO05D008258 4.0e-44 181.8 158 55.1
AL6G21140 Arabidopsis lyrata HOM05D007029 ORTHO05D008258 5.3e-44 181.4 158 54.4
Phvul.001G057900 Phaseolus vulgaris HOM05D007029 ORTHO05D008258 5.3e-44 181.4 158 52.5
AT5G10620 Arabidopsis thaliana HOM05D007029 ORTHO05D008258 6.9e-44 181.0 158 53.8
C09p66200 Brassica napus HOM05D007029 ORTHO05D008258 6.9e-44 181.0 158 55.1
BolC9t59441H Brassica oleracea HOM05D007029 ORTHO05D008258 6.9e-44 181.0 158 55.1
Thhalv10014744m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 6.9e-44 181.0 158 53.8
Potri.006G278500 Populus trichocarpa HOM05D007029 ORTHO05D008258 6.9e-44 181.0 158 51.9
CANSAT25G3139 Cannabis sativa HOM05D007029 ORTHO05D008258 9.0e-44 180.6 158 55.7
Eucgr.C03998 Eucalyptus grandis HOM05D007029 ORTHO05D008258 9.0e-44 180.6 158 55.7
BolC9t59447H Brassica oleracea HOM05D007029 ORTHO05D008258 1.2e-43 180.3 158 55.1
unitig_748.g7379 Utricularia gibba HOM05D007029 ORTHO05D008258 1.2e-43 180.3 158 52.5
Nitab4.5_0001159g0100 Nicotiana tabacum HOM05D007029 ORTHO05D008258 1.5e-43 179.9 158 53.2
Nitab4.5_0003963g0040 Nicotiana tabacum HOM05D007029 ORTHO05D008258 1.5e-43 179.9 158 53.2
PGR044G0703 Punica granatum HOM05D007029 ORTHO05D008258 1.5e-43 179.9 158 52.5
BcaB08g37096 Brassica carinata HOM05D007029 ORTHO05D008258 2.0e-43 179.5 158 53.2
A10p26970 Brassica napus HOM05D007029 ORTHO05D008258 2.6e-43 179.1 158 54.4
MELO3C003643.2 Cucumis melo HOM05D007029 ORTHO05D008258 2.6e-43 179.1 158 52.5
Lj5g0005194 Lotus japonicus HOM05D007029 ORTHO05D008258 2.6e-43 179.1 154 53.2
Sabra06G0216100 Salix brachista HOM05D007029 ORTHO05D008258 2.6e-43 179.1 158 51.9
ATR0626G398 Amborella trichopoda HOM05D007029 ORTHO05D008258 4.5e-43 178.3 157 52.9
BraA10t44748Z Brassica rapa HOM05D007029 ORTHO05D008258 4.5e-43 178.3 158 54.4
TPR.G12034 Trifolium pratense HOM05D007029 ORTHO05D008258 4.5e-43 178.3 158 52.5
Manes.03G086800 Manihot esculenta HOM05D007029 ORTHO05D008258 5.8e-43 177.9 158 52.5
Sopen12g032190 Solanum pennellii HOM05D007029 ORTHO05D008258 5.8e-43 177.9 158 53.8
C09p66570 Brassica napus HOM05D007029 ORTHO05D008258 7.6e-43 177.6 158 54.4
Sc09g0007900 Simmondsia chinensis HOM05D007029 ORTHO05D008258 7.6e-43 177.6 158 52.5
CAN.G947.13 Capsicum annuum HOM05D007029 ORTHO05D008258 1.0e-42 177.2 158 53.8
Duzib168G0066 Durio zibethinus HOM05D007029 ORTHO05D008258 1.0e-42 177.2 158 53.2
HanXRQChr14g0454741 Helianthus annuus HOM05D007029 ORTHO05D008258 1.0e-42 177.2 159 54.1
SalBow4G2612 Salvia bowleyana HOM05D007029 ORTHO05D008258 1.0e-42 177.2 158 51.9
THA.LOC104799006 Tarenaya hassleriana HOM05D007029 ORTHO05D008258 1.0e-42 177.2 158 51.3
C09p66410 Brassica napus HOM05D007029 ORTHO05D008258 1.3e-42 176.8 158 54.4
Cfa013252 Carpinus fangiana HOM05D007029 ORTHO05D008258 1.3e-42 176.8 158 51.9
Sp6g32830 Schrenkiella parvula HOM05D007029 ORTHO05D008258 1.3e-42 176.8 158 52.5
GSVIVG01035546001 Vitis vinifera HOM05D007029 ORTHO05D008258 1.3e-42 176.8 158 50.6
AagrBONN_evm.TU.Sc2ySwM_368.1595 Anthoceros agrestis HOM05D007029 ORTHO05D008258 1.7e-42 176.4 154 56.5
Ca_12881_v3 Cicer arietinum L. HOM05D007029 ORTHO05D008258 2.2e-42 176.0 154 53.2
Lalb_Chr24g0402421 Lupinus albus HOM05D007029 ORTHO05D008258 2.2e-42 176.0 158 50.6
Sc09g0007640 Simmondsia chinensis HOM05D007029 ORTHO05D008258 2.2e-42 176.0 158 51.9
Cpa.g.sc10.205 Carica papaya HOM05D007029 ORTHO05D008258 2.9e-42 175.6 176 48.9
CBR_g21129 Chara braunii HOM05D007029 ORTHO05D008258 2.9e-42 175.6 158 53.8
Hund03277 Selenicereus undatus HOM05D007029 ORTHO05D008258 2.9e-42 175.6 158 53.8
Sed0023533 Sechium edule HOM05D007029 ORTHO05D008258 3.8e-42 175.3 158 50.0
Thecc.09G005000 Theobroma cacao HOM05D007029 ORTHO05D008258 8.4e-42 174.1 158 51.3
Cc06_g08830 Coffea canephora HOM05D007029 ORTHO05D008258 1.1e-41 173.7 158 52.5
Aa31LG3G16490 Aethionema arabicum HOM05D007029 ORTHO05D008258 1.4e-41 173.3 158 51.3
FvH4_2g30670 Fragaria vesca HOM05D007029 ORTHO05D008258 3.2e-41 172.2 158 48.1
Migut.A00446 Erythranthe guttata HOM05D007029 ORTHO05D008258 4.2e-41 171.8 158 51.9
Prupe.1G462300 Prunus persica HOM05D007029 ORTHO05D008258 7.1e-41 171.0 158 49.4
FAN20G2423 Fragaria x ananassa HOM05D007029 ORTHO05D008258 1.6e-40 169.9 158 47.5
MSTRG.25772 Avicennia marina HOM05D007029 ORTHO05D008258 2.1e-40 169.5 158 50.6
RcHm_v2.0_Chr6g0312221 Rosa chinensis HOM05D007029 ORTHO05D008258 2.1e-40 169.5 158 47.5
Os04g0606900 Oryza sativa ssp. japonica HOM05D007029 ORTHO05D008258 3.5e-40 168.7 158 52.5
MD15G1110100 Malus domestica HOM05D007029 ORTHO05D008258 4.6e-40 168.3 154 49.4
Glyma.17G201400 Glycine max HOM05D007029 ORTHO05D008258 3.9e-39 165.2 138 53.6
Zm00001eb071440 Zea mays HOM05D007029 ORTHO05D008258 3.9e-39 165.2 160 53.1
CsaV3_3G046940 Cucumis sativus L. HOM05D007029 ORTHO05D008258 5.1e-39 164.9 178 46.6
Atru.chr7.2665 Acer truncatum HOM05D007029 ORTHO05D008258 6.7e-39 164.5 162 49.4
FAN24G0248 Fragaria x ananassa HOM05D007029 ORTHO05D008258 1.5e-38 163.3 158 45.6
arahy.Tifrunner.gnm1.ann1.MMLL3W Arachis hypogaea HOM05D007029 ORTHO05D008258 4.3e-38 161.8 156 50.0
PGSC0003DMG400029282 Solanum tuberosum HOM05D007029 ORTHO05D008258 9.7e-38 160.6 156 51.3
Gohir.A06G106900 Gossypium hirsutum HOM05D007029 ORTHO05D008258 1.3e-37 160.2 145 55.2
QL12p024672 Quercus lobata HOM05D007029 ORTHO05D008258 8.2e-37 157.5 145 51.7
Oeu059287.2 Olea europaea HOM05D007029 ORTHO05D008258 6.9e-36 154.5 141 53.9
CiPaw.07G214600 Carya illinoinensis HOM05D007029 ORTHO05D008258 2.0e-35 152.9 156 48.1
EL10Ac2g03716 Beta vulgaris HOM05D007029 ORTHO05D008258 3.4e-35 152.1 145 53.8
TWI63G1096 Tripterygium wilfordii HOM05D007029 ORTHO05D008258 1.3e-34 150.2 145 49.0
MCO07G593 Micromonas commoda HOM05D007029 ORTHO05D008258 8.5e-34 147.5 158 46.2
Carub.0006s0910 Capsella rubella HOM05D007029 ORTHO05D008258 5.5e-33 144.8 137 51.1
Cre16.g680100 Chlamydomonas reinhardtii HOM05D007029 ORTHO05D008258 9.4e-33 144.1 156 47.4
ClCG05G017440 Citrullus lanatus HOM05D007029 ORTHO05D008258 6.1e-32 141.4 139 48.2
arahy.Tifrunner.gnm1.ann1.J6QZET Arachis hypogaea HOM05D007029 ORTHO05D008258 6.7e-31 137.9 143 46.9
Ciclev10009808m.g Citrus clementina HOM05D007029 ORTHO05D008258 8.8e-31 137.5 158 46.2
SGA_v2.0_scaffold27G11664 Striga asiatica HOM05D007029 ORTHO05D008258 2.8e-29 132.5 237 34.2
SEGI_22347 Sequoiadendron giganteum HOM05D007029 ORTHO05D008258 3.7e-29 132.1 128 48.4
MBI13_g31530_MAGBIO Magnolia biondii HOM05D007029 ORTHO05D008258 4.8e-29 131.7 186 39.2
Oeu038914.4 Olea europaea HOM05D000263 ORTHO05D008258 1.4e-28 130.2 118 55.1
CDE04G2652 Ceratophyllum demersum HOM05D000178 ORTHO05D000229 2.4e-28 129.4 107 56.1
Solyc12g096330.3 Solanum lycopersicum HOM05D007029 ORTHO05D008258 6.9e-28 127.9 97 59.8
C09p66490 Brassica napus HOM05D007029 ORTHO05D008258 1.2e-27 127.1 88 65.9
COL.COLO4_18612 Corchorus olitorius HOM05D007029 ORTHO05D008258 8.5e-26 120.9 119 47.1
PRCOL_00001289 Prasinoderma coloniale HOM05D007029 ORTHO05D008258 4.7e-24 115.2 140 45.0
Lsat_1_v5_gn_2_109441 Lactuca sativa HOM05D007029 ORTHO05D008258 1.0e-23 114.0 124 48.4
Haze_08560 Corylus avellana HOM05D007029 ORTHO05D008258 8.8e-23 110.9 143 39.9
Dinv09200 Davidia involucrata HOM05D007029 ORTHO05D008258 8.8e-23 110.9 114 50.9
Peaxi162Scf00459g00835 Petunia axillaris HOM05D007029 ORTHO05D008258 8.8e-23 110.9 98 55.1
Oeu059279.1 Olea europaea HOM05D007029 ORTHO05D008258 1.5e-22 110.2 93 58.1
Thhalv10000503m.g Eutrema salsugineum HOM05D007029 ORTHO05D008258 9.7e-22 107.5 130 45.4
Actinidia22252 Actinidia chinensis HOM05D007029 ORTHO05D008258 2.8e-21 105.9 107 51.4
Hma1.2p1_0443F.1_g154050 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 3.1e-20 102.4 75 62.7
COL.COLO4_02059 Corchorus olitorius HOM05D007029 ORTHO05D008258 9.1e-20 100.9 155 34.8
VMungo0647G0111 Vigna mungo HOM05D007029 ORTHO05D008258 2.7e-16 89.4 103 40.8
AUR62020630 Chenopodium quinoa HOM05D007029 ORTHO05D008258 3.6e-16 89.0 93 50.5
AUR62038752 Chenopodium quinoa HOM05D007029 ORTHO05D008258 1.0e-15 87.4 93 48.4
Medtr1g010000 Medicago truncatula HOM05D007029 ORTHO05D008258 1.0e-15 87.4 95 43.2
C09p66660 Brassica napus HOM05D007029 ORTHO05D008258 2.3e-15 86.3 96 45.8
Gohir.D06G109100 Gossypium hirsutum HOM05D007029 ORTHO05D008258 3.0e-15 85.9 95 48.4
Ah.10g033770 Amaranthus hybridus HOM05D007029 ORTHO05D008258 3.9e-15 85.5 94 47.9
Hma1.2p1_0443F.1_g154060 Hydrangea macrophylla HOM05D007029 ORTHO05D008258 3.7e-13 79.0 48 70.8
CDE07G1585 Ceratophyllum demersum HOM05D003168 ORTHO05D003590 6.5e-10 68.2 76 51.3
ECA238G0229 Erigeron canadensis HOM05D007029 ORTHO05D008258 2.0e-06 56.6 57 40.4
Haze_21697 Corylus avellana HOM05D000022 ORTHO05D010831 7.5e-06 54.7 113 32.7


User provided reference genes

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