Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 2.0e-269 931.8 454 100.0
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 3.3e-94 349.7 494 39.1
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 2.8e-93 346.7 482 39.6
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 3.7e-90 336.3 485 39.2
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 3.5e-88 329.7 470 39.6
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 8.1e-85 318.5 468 38.9
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 1.8e-84 317.4 477 39.0
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 1.8e-84 317.4 472 39.2
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 6.8e-84 315.5 472 39.2
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 8.9e-84 315.1 482 39.4
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 8.9e-84 315.1 476 38.7
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 1.5e-83 314.3 472 39.2
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 2.6e-83 313.5 471 38.6
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 3.4e-83 313.2 486 39.3
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 3.4e-83 313.2 474 40.3
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 3.4e-83 313.2 473 40.0
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 5.8e-83 312.4 470 38.5
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 5.8e-83 312.4 471 38.6
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 5.8e-83 312.4 473 37.4
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 9.9e-83 311.6 479 38.0
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 9.9e-83 311.6 471 38.6
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 1.3e-82 311.2 470 37.4
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 2.2e-82 310.5 473 38.9
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 3.7e-82 309.7 460 37.8
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 8.3e-82 308.5 466 39.3
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 8.3e-82 308.5 471 38.0
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 1.1e-81 308.1 482 38.2
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 1.4e-81 307.8 468 39.7
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 1.4e-81 307.8 469 38.2
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 1.4e-81 307.8 469 38.0
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 1.9e-81 307.4 475 37.7
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 1.9e-81 307.4 469 37.7
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 2.4e-81 307.0 471 37.8
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 3.2e-81 306.6 487 39.4
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 3.2e-81 306.6 480 38.8
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 3.2e-81 306.6 468 37.6
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 3.2e-81 306.6 471 36.9
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 4.1e-81 306.2 463 39.5
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 7.1e-81 305.4 468 39.5
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 7.1e-81 305.4 468 40.2
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 9.2e-81 305.1 479 37.2
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 1.2e-80 304.7 471 38.4
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 2.1e-80 303.9 461 40.1
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 3.5e-80 303.1 469 37.5
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 3.5e-80 303.1 468 39.5
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 3.5e-80 303.1 470 38.1
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 4.6e-80 302.8 493 36.3
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 4.6e-80 302.8 475 37.3
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 4.6e-80 302.8 475 37.3
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 7.8e-80 302.0 469 37.1
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 1.0e-79 301.6 470 38.3
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 1.7e-79 300.8 471 38.4
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 2.3e-79 300.4 491 38.1
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 2.3e-79 300.4 467 39.4
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 3.0e-79 300.1 475 37.1
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 5.1e-79 299.3 470 38.5
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 5.1e-79 299.3 474 36.9
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 6.6e-79 298.9 466 38.2
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 8.6e-79 298.5 491 37.9
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 1.1e-78 298.1 502 36.9
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 1.1e-78 298.1 466 37.6
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 1.9e-78 297.4 478 37.0
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 2.5e-78 297.0 505 35.4
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 3.3e-78 296.6 475 37.5
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 5.6e-78 295.8 473 37.8
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 5.6e-78 295.8 492 35.6
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 9.5e-78 295.0 481 37.0
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 9.5e-78 295.0 483 36.4
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 1.2e-77 294.7 453 38.2
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 2.8e-77 293.5 470 36.8
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 3.6e-77 293.1 466 37.6
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 4.7e-77 292.7 476 35.9
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 4.7e-77 292.7 467 38.3
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 4.7e-77 292.7 453 38.2
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 6.2e-77 292.4 475 37.3
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 8.1e-77 292.0 470 36.2
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 1.1e-76 291.6 468 37.2
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 1.8e-76 290.8 483 36.9
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 3.1e-76 290.0 475 36.6
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 4.0e-76 289.7 470 36.6
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 4.0e-76 289.7 484 35.3
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 5.2e-76 289.3 474 36.7
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 1.5e-75 287.7 495 35.4
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 3.4e-75 286.6 477 36.5
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 4.4e-75 286.2 473 37.4
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 7.6e-75 285.4 471 34.6
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 1.3e-74 284.6 473 36.6
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 3.8e-74 283.1 486 35.2
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 4.9e-74 282.7 471 36.3
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 8.4e-74 282.0 517 36.2
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 1.1e-73 281.6 518 35.5
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 1.9e-73 280.8 471 36.1
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 7.1e-73 278.9 468 36.1
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 2.1e-72 277.3 471 35.5
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 2.7e-72 276.9 333 46.2
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 3.0e-71 273.5 470 35.3
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 3.9e-71 273.1 433 37.2
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 1.5e-67 261.2 484 34.5
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 3.4e-67 260.0 468 37.0
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 2.2e-66 257.3 260 49.2
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 2.4e-65 253.8 316 44.0
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 1.4e-60 238.0 495 33.1
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 3.4e-59 233.4 472 32.4
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 3.4e-51 206.8 391 33.5
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 7.1e-49 199.1 220 46.4
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 1.3e-39 168.3 382 31.2
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 9.7e-30 135.6 329 28.9
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 7.7e-27 125.9 101 54.5
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 1.4e-25 121.7 158 39.9
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 2.8e-21 107.5 76 64.5
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 1.1e-17 95.5 74 56.8
Duzib116G0861 Durio zibethinus HOM05D006698 ORTHO05D008415 6.8e-07 59.7 57 49.1
CAN.G841.8 Capsicum annuum HOM05D006431 ORTHO05D007918 8.8e-07 59.3 171 25.7
Peaxi162Scf01662g00115 Petunia axillaris HOM05D006431 ORTHO05D007918 1.2e-06 58.9 171 26.9
COL.COLO4_29622 Corchorus olitorius HOM05D006431 ORTHO05D007918 2.0e-06 58.2 245 22.9
TWI74G1016 Tripterygium wilfordii HOM05D006431 ORTHO05D007918 2.6e-06 57.8 206 25.7
Duzib093G0136 Durio zibethinus HOM05D006431 ORTHO05D007918 5.7e-06 56.6 232 23.7
MSTRG.26617 Avicennia marina HOM05D006431 ORTHO05D007918 7.5e-06 56.2 201 22.4
Cc00_g18360 Coffea canephora HOM05D006431 ORTHO05D007918 7.5e-06 56.2 202 25.7
FAN05G2067 Fragaria x ananassa HOM05D006431 ORTHO05D007918 7.5e-06 56.2 199 25.1


User provided reference genes

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