Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO145G0139 Selaginella moellendorffii HOM05D005382 ORTHO05D006795 6.0e-68 260.8 136 100.0
Mapoly0128s0009 Marchantia polymorpha HOM05D005382 ORTHO05D006795 6.0e-44 181.0 131 74.0
Actinidia08935 Actinidia chinensis HOM05D005382 ORTHO05D006795 4.3e-42 174.9 133 67.7
Prupe.3G103600 Prunus persica HOM05D005382 ORTHO05D006795 9.6e-42 173.7 133 66.9
TWI12G1456 Tripterygium wilfordii HOM05D005382 ORTHO05D006795 9.6e-42 173.7 133 66.2
MD17G1226400 Malus domestica HOM05D005382 ORTHO05D006795 1.3e-41 173.3 132 67.4
Potri.001G041900 Populus trichocarpa HOM05D005382 ORTHO05D006795 1.3e-41 173.3 133 66.2
Pp3c16_25700 Physcomitrium patens HOM05D005382 ORTHO05D006795 2.1e-41 172.6 134 70.1
HanXRQChr04g0100021 Helianthus annuus HOM05D005382 ORTHO05D006795 3.7e-41 171.8 133 65.4
MSTRG.9395 Avicennia marina HOM05D005382 ORTHO05D006795 6.2e-41 171.0 136 64.7
Migut.I00626 Erythranthe guttata HOM05D005382 ORTHO05D006795 6.2e-41 171.0 133 65.4
Manes.11G069200 Manihot esculenta HOM05D005382 ORTHO05D006795 6.2e-41 171.0 128 68.0
Medtr4g007700 Medicago truncatula HOM05D005382 ORTHO05D006795 6.2e-41 171.0 128 69.5
COL.COLO4_26772 Corchorus olitorius HOM05D005382 ORTHO05D006795 1.1e-40 170.2 133 65.4
Lsat_1_v5_gn_1_30801 Lactuca sativa HOM05D005382 ORTHO05D006795 1.1e-40 170.2 131 67.9
Pp3c25_9780 Physcomitrium patens HOM05D005382 ORTHO05D006795 1.1e-40 170.2 134 69.4
TWI75G0559 Tripterygium wilfordii HOM05D005382 ORTHO05D006795 1.1e-40 170.2 133 65.4
Oeu003125.1 Olea europaea HOM05D005382 ORTHO05D006795 1.4e-40 169.9 133 63.9
Rhsim12G0185400 Rhododendron simsii HOM05D005382 ORTHO05D006795 1.4e-40 169.9 133 64.7
Sabra01G0028700 Salix brachista HOM05D005382 ORTHO05D006795 1.4e-40 169.9 133 64.7
VMungo0647G2390 Vigna mungo HOM05D005382 ORTHO05D006795 1.4e-40 169.9 135 66.7
CsaV3_7G031710 Cucumis sativus L. HOM05D005382 ORTHO05D006795 1.8e-40 169.5 132 64.4
Eucgr.J03130 Eucalyptus grandis HOM05D005382 ORTHO05D006795 1.8e-40 169.5 133 64.7
Lj5A81T85 Lonicera japonica HOM05D005382 ORTHO05D006795 1.8e-40 169.5 133 65.4
Lj3g0027435 Lotus japonicus HOM05D005382 ORTHO05D006795 1.8e-40 169.5 133 65.4
MD09G1227600 Malus domestica HOM05D005382 ORTHO05D006795 1.8e-40 169.5 131 66.4
Manes.04G100900 Manihot esculenta HOM05D005382 ORTHO05D006795 1.8e-40 169.5 128 65.6
THA.LOC104808172 Tarenaya hassleriana HOM05D005382 ORTHO05D006795 1.8e-40 169.5 129 65.9
MSTRG.22842 Avicennia marina HOM05D005382 ORTHO05D006795 2.4e-40 169.1 133 64.7
HanXRQChr09g0274181 Helianthus annuus HOM05D005382 ORTHO05D006795 2.4e-40 169.1 136 66.2
Nn8g40079 Nelumbo nucifera HOM05D005382 ORTHO05D006795 2.4e-40 169.1 134 64.2
TAR625G1145 Trochodendron aralioides HOM05D005382 ORTHO05D006795 2.4e-40 169.1 136 64.0
Glyma.08G220400 Glycine max HOM05D005382 ORTHO05D006795 3.1e-40 168.7 128 68.0
PGR102G0492 Punica granatum HOM05D005382 ORTHO05D006795 3.1e-40 168.7 137 62.8
Ciclev10026461m.g Citrus clementina HOM05D005382 ORTHO05D006795 4.0e-40 168.3 128 66.4
ECA232G4196 Erigeron canadensis HOM05D005382 ORTHO05D006795 4.0e-40 168.3 133 66.2
SalBow1G1272 Salvia bowleyana HOM05D005382 ORTHO05D006795 4.0e-40 168.3 135 65.2
vmacro16842 Vaccinium macrocarpon HOM05D005382 ORTHO05D006795 4.0e-40 168.3 133 63.9
Cfa001857 Carpinus fangiana HOM05D005382 ORTHO05D006795 5.3e-40 167.9 128 65.6
Haze_16689 Corylus avellana HOM05D005382 ORTHO05D006795 5.3e-40 167.9 128 65.6
ECA247G2189 Erigeron canadensis HOM05D005382 ORTHO05D006795 5.3e-40 167.9 131 66.4
Gohir.A11G075200 Gossypium hirsutum HOM05D005382 ORTHO05D006795 6.9e-40 167.5 135 65.2
Gorai.007G085500 Gossypium raimondii HOM05D005382 ORTHO05D006795 6.9e-40 167.5 135 65.2
CiPaw.01G256500 Carya illinoinensis HOM05D005382 ORTHO05D006795 9.0e-40 167.2 131 64.9
CiPaw.02G163400 Carya illinoinensis HOM05D005382 ORTHO05D006795 9.0e-40 167.2 131 64.1
MELO3C023486.2 Cucumis melo HOM05D005382 ORTHO05D006795 9.0e-40 167.2 132 65.9
Rhsim08G0203100 Rhododendron simsii HOM05D005382 ORTHO05D006795 9.0e-40 167.2 133 64.7
SGA_v2.0_scaffold515G52664 Striga asiatica HOM05D003096 ORTHO05D003521 9.0e-40 167.2 131 64.9
Cc04_g05300 Coffea canephora HOM05D005382 ORTHO05D006795 1.2e-39 166.8 133 63.2
Lsat_1_v5_gn_4_85061 Lactuca sativa HOM05D005382 ORTHO05D006795 1.2e-39 166.8 134 65.7
Phvul.008G253200 Phaseolus vulgaris HOM05D005382 ORTHO05D006795 1.2e-39 166.8 128 67.2
Thecc.06G046600 Theobroma cacao HOM05D005382 ORTHO05D006795 1.2e-39 166.8 128 66.4
Dinv21426 Davidia involucrata HOM05D005382 ORTHO05D006795 1.5e-39 166.4 133 65.4
Glyma.07G021400 Glycine max HOM05D005382 ORTHO05D006795 1.5e-39 166.4 128 67.2
PSO782G0145 Papaver somniferum HOM05D005382 ORTHO05D006795 1.5e-39 166.4 137 65.7
Potri.003G184925 Populus trichocarpa HOM05D005382 ORTHO05D006795 1.5e-39 166.4 128 65.6
GSVIVG01016103001 Vitis vinifera HOM05D005382 ORTHO05D006795 1.5e-39 166.4 136 64.7
AT1G80940 Arabidopsis thaliana HOM05D005382 ORTHO05D006795 2.0e-39 166.0 134 64.9
ClCG09G003490 Citrullus lanatus HOM05D005382 ORTHO05D006795 2.0e-39 166.0 132 65.2
AL2G40440 Arabidopsis lyrata HOM05D005382 ORTHO05D006795 2.6e-39 165.6 134 64.9
CSS0039254 Camellia sinensis var. sinensis HOM05D005382 ORTHO05D006795 2.6e-39 165.6 131 64.1
Thhalv10019121m.g Eutrema salsugineum HOM05D005382 ORTHO05D006795 2.6e-39 165.6 134 64.9
FAN02G4537 Fragaria x ananassa HOM05D005382 ORTHO05D006795 3.4e-39 165.2 126 65.1
FAN05G5289 Fragaria x ananassa HOM05D005382 ORTHO05D006795 3.4e-39 165.2 126 65.1
Lalb_Chr25g0278731 Lupinus albus HOM05D005382 ORTHO05D006795 3.4e-39 165.2 134 65.7
Oeu051555.1 Olea europaea HOM05D005382 ORTHO05D006795 3.4e-39 165.2 133 63.2
Duzib235G0288 Durio zibethinus HOM05D005382 ORTHO05D006795 4.5e-39 164.9 132 64.4
Nn8g40087 Nelumbo nucifera HOM05D005382 ORTHO05D006795 4.5e-39 164.9 134 63.4
Sabra03G0135500 Salix brachista HOM05D005382 ORTHO05D006795 4.5e-39 164.9 128 65.6
SGA_v2.0_scaffold74G24593 Striga asiatica HOM05D005382 ORTHO05D006795 4.5e-39 164.9 131 64.9
Carub.0002s2660 Capsella rubella HOM05D005382 ORTHO05D006795 5.8e-39 164.5 133 66.2
Sc12g0008250 Simmondsia chinensis HOM05D005382 ORTHO05D006795 5.8e-39 164.5 129 64.3
FvH4_6g28270 Fragaria vesca HOM05D005382 ORTHO05D006795 7.6e-39 164.1 126 65.1
QL05p036845 Quercus lobata HOM05D005382 ORTHO05D006795 7.6e-39 164.1 128 64.8
C06p53570 Brassica napus HOM05D005382 ORTHO05D006795 9.9e-39 163.7 133 64.7
BcaB02g07237 Brassica carinata HOM05D005382 ORTHO05D006795 1.3e-38 163.3 131 65.6
BcaNung04166 Brassica carinata HOM05D005382 ORTHO05D006795 1.3e-38 163.3 131 65.6
A07p26960 Brassica napus HOM05D005382 ORTHO05D006795 1.3e-38 163.3 131 65.6
BraA07t30340Z Brassica rapa HOM05D005382 ORTHO05D006795 1.3e-38 163.3 131 65.6
Hma1.2p1_0329F.1_g127290 Hydrangea macrophylla HOM05D005382 ORTHO05D006795 1.3e-38 163.3 128 65.6
Lalb_Chr01g0011991 Lupinus albus HOM05D005382 ORTHO05D006795 1.3e-38 163.3 128 67.2
Aa31LG4G1250 Aethionema arabicum HOM05D005382 ORTHO05D006795 1.7e-38 162.9 129 66.7
Duzib192G0805 Durio zibethinus HOM05D005382 ORTHO05D006795 1.7e-38 162.9 133 63.2
Eucgr.F03985 Eucalyptus grandis HOM05D005382 ORTHO05D006795 1.7e-38 162.9 128 64.8
BcaB02g08711 Brassica carinata HOM05D005382 ORTHO05D006795 2.2e-38 162.5 133 63.9
A07p44750 Brassica napus HOM05D005382 ORTHO05D006795 2.2e-38 162.5 133 63.9
CDE04G1090 Ceratophyllum demersum HOM05D005382 ORTHO05D006795 2.2e-38 162.5 138 61.6
Peaxi162Scf00314g01032 Petunia axillaris HOM05D005382 ORTHO05D006795 2.2e-38 162.5 133 62.4
ATR0580G392 Amborella trichopoda HOM05D005382 ORTHO05D006795 2.9e-38 162.2 137 64.2
DCAR_021374 Daucus carota HOM05D005382 ORTHO05D006795 2.9e-38 162.2 133 64.7
FAN09G0036 Fragaria x ananassa HOM05D005382 ORTHO05D006795 2.9e-38 162.2 132 64.4
MBI15_g08404_MAGBIO Magnolia biondii HOM05D005382 ORTHO05D006795 2.9e-38 162.2 134 62.7
RcHm_v2.0_Chr2g0132311 Rosa chinensis HOM05D005382 ORTHO05D006795 2.9e-38 162.2 124 64.5
Sp5g34800 Schrenkiella parvula HOM05D005382 ORTHO05D006795 2.9e-38 162.2 129 65.1
Sed0008280 Sechium edule HOM05D005382 ORTHO05D006795 2.9e-38 162.2 131 62.6
Solyc03g117670.4 Solanum lycopersicum HOM05D005382 ORTHO05D006795 2.9e-38 162.2 133 60.9
C06p29630 Brassica napus HOM05D005382 ORTHO05D006795 3.8e-38 161.8 134 64.9
BolC6t38128H Brassica oleracea HOM05D005382 ORTHO05D006795 3.8e-38 161.8 134 64.9
PSO063G0682 Papaver somniferum HOM05D005382 ORTHO05D006795 3.8e-38 161.8 137 64.2
Nitab4.5_0002700g0060 Nicotiana tabacum HOM05D005382 ORTHO05D006795 4.9e-38 161.4 132 63.6
BcaC08g47533 Brassica carinata HOM05D005382 ORTHO05D006795 6.4e-38 161.0 133 63.2
BolC6t40373H Brassica oleracea HOM05D005382 ORTHO05D006795 6.4e-38 161.0 133 63.2
BraA07t31983Z Brassica rapa HOM05D005382 ORTHO05D006795 8.4e-38 160.6 133 63.2
CARHR073510 Cardamine hirsuta HOM05D005382 ORTHO05D006795 8.4e-38 160.6 133 63.9
AUR62032996 Chenopodium quinoa HOM05D005382 ORTHO05D006795 8.4e-38 160.6 133 61.7
MSTRG.11221 Avicennia marina HOM05D005382 ORTHO05D006795 1.1e-37 160.2 128 63.3
CAN.G1008.7 Capsicum annuum HOM05D005382 ORTHO05D006795 1.1e-37 160.2 133 60.2
AUR62034069 Chenopodium quinoa HOM05D007611 ORTHO05D006795 1.1e-37 160.2 133 61.7
Os02g0793900 Oryza sativa ssp. japonica HOM05D005382 ORTHO05D006795 1.1e-37 160.2 133 63.9
SEGI_41275 Sequoiadendron giganteum HOM05D005382 ORTHO05D006795 1.1e-37 160.2 136 61.8
Sopen03g036580 Solanum pennellii HOM05D005382 ORTHO05D006795 1.9e-37 159.5 133 60.2
EL10Ac8g19398 Beta vulgaris HOM05D005382 ORTHO05D006795 2.4e-37 159.1 128 62.5
Zm00001eb257680 Zea mays HOM05D005382 ORTHO05D006795 2.4e-37 159.1 135 63.0
PGSC0003DMG400014155 Solanum tuberosum HOM05D005382 ORTHO05D006795 3.2e-37 158.7 133 60.2
Nitab4.5_0004738g0090 Nicotiana tabacum HOM05D005382 ORTHO05D006795 4.2e-37 158.3 132 62.1
CANSAT56G2690 Cannabis sativa HOM05D005382 ORTHO05D006795 1.6e-36 156.4 135 62.2
CDE07G1687 Ceratophyllum demersum HOM05D005382 ORTHO05D006795 1.6e-36 156.4 128 61.7
TPR.G3367 Trifolium pratense HOM05D005382 ORTHO05D006795 1.6e-36 156.4 114 71.1
FAN14G0578 Fragaria x ananassa HOM05D005382 ORTHO05D006795 2.7e-36 155.6 116 66.4
Gohir.D11G079900 Gossypium hirsutum HOM05D005382 ORTHO05D006795 3.5e-36 155.2 116 68.1
HPP92_010348 Vanilla planifolia HOM05D005382 ORTHO05D006795 6.0e-36 154.5 139 59.0
Psat7g262200 Pisum sativum HOM05D005382 ORTHO05D006795 1.0e-35 153.7 114 69.3
Cpa.g.c28380.1 Carica papaya HOM05D005382 ORTHO05D006795 8.7e-35 150.6 125 64.8
SEGI_02613 Sequoiadendron giganteum HOM05D005382 ORTHO05D006795 1.3e-30 136.7 116 64.7
arahy.Tifrunner.gnm1.ann1.7IZ6IW Arachis hypogaea HOM05D005382 ORTHO05D006795 4.2e-29 131.7 131 57.3
arahy.Tifrunner.gnm1.ann1.HUQR60 Arachis hypogaea HOM05D005382 ORTHO05D006795 4.2e-29 131.7 131 57.3
Ah.14g085670 Amaranthus hybridus HOM05D005382 ORTHO05D006795 1.9e-26 122.9 133 51.1
CSS0015514 Camellia sinensis var. sinensis HOM05D005382 ORTHO05D006795 4.6e-20 101.7 71 67.6
Hund12559 Selenicereus undatus HOM05D005382 ORTHO05D006795 4.6e-20 101.7 71 64.8
AagrBONN_evm.TU.Sc2ySwM_117.2014 Anthoceros agrestis HOM05D005382 ORTHO05D006795 1.3e-17 93.6 74 74.3
BcaB07g33703 Brassica carinata HOM05D005382 ORTHO05D006795 1.8e-16 89.7 72 58.3
unitig_22.g6275 Utricularia gibba HOM05D005382 ORTHO05D006795 4.5e-15 85.1 74 62.2
Actinidia36864 Actinidia chinensis HOM05D005382 ORTHO05D006795 1.9e-13 79.7 130 41.5
BcaB07g33704 Brassica carinata HOM05D005382 ORTHO05D006795 9.4e-13 77.4 62 56.5
BcaB07g33705 Brassica carinata HOM05D005382 ORTHO05D006795 9.4e-13 77.4 62 56.5
Atru.chr1.2804_Atru.chr1.2805 Acer truncatum HOM05D005382 ORTHO05D006795 1.2e-12 77.0 121 44.6
Actinidia26580 Actinidia chinensis HOM05D005382 ORTHO05D006795 8.8e-11 70.9 63 61.9


User provided reference genes

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