Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO145G0090 Selaginella moellendorffii HOM05D007356 ORTHO05D009247 1.3e-293 1012.3 522 100.0
MBI16_g25107_MAGBIO Magnolia biondii HOM05D007356 ORTHO05D009247 4.4e-26 123.6 430 27.9
Mapoly0080s0048 Marchantia polymorpha HOM05D007356 ORTHO05D009247 5.4e-24 116.7 507 29.4
TAR374G1737 Trochodendron aralioides HOM05D007356 ORTHO05D009247 2.0e-23 114.8 542 27.5
Aqoxy3G03920 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 4.5e-23 113.6 539 26.5
Cc07_g09030 Coffea canephora HOM05D007356 ORTHO05D009247 4.5e-23 113.6 363 28.7
AagrBONN_evm.TU.Sc2ySwM_344.3211 Anthoceros agrestis HOM05D007356 ORTHO05D009247 5.0e-22 110.2 208 36.1
CDE08G0776 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 1.5e-21 108.6 520 26.5
Nn4g23745 Nelumbo nucifera HOM05D007356 ORTHO05D009247 5.5e-21 106.7 550 26.5
Pp3c9_14770 Physcomitrium patens HOM05D007356 ORTHO05D009247 5.5e-21 106.7 299 33.1
ClCG05G012060 Citrullus lanatus HOM05D007356 ORTHO05D009247 1.2e-20 105.5 526 26.6
PSO782G4491 Papaver somniferum HOM05D007356 ORTHO05D009247 1.4e-19 102.1 241 35.7
Hma1.2p1_0136F.1_g062070 Hydrangea macrophylla HOM05D007356 ORTHO05D009247 1.8e-19 101.7 527 26.4
PSO063G7355 Papaver somniferum HOM05D007356 ORTHO05D009247 1.8e-19 101.7 538 25.1
CDE02G0316 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 3.0e-19 100.9 473 26.2
Lsat_1_v5_gn_4_153101 Lactuca sativa HOM05D007356 ORTHO05D009247 8.8e-19 99.4 352 25.6
CsaV3_3G020350 Cucumis sativus L. HOM05D007356 ORTHO05D009247 1.2e-18 99.0 541 26.8
PGSC0003DMG400012678 Solanum tuberosum HOM05D007356 ORTHO05D009247 9.8e-18 95.9 428 27.3
Rhsim10G0063400 Rhododendron simsii HOM05D007356 ORTHO05D009247 2.2e-17 94.7 506 25.7
ATR0681G386 Amborella trichopoda HOM05D007356 ORTHO05D009247 2.8e-17 94.4 266 34.2
TPR.G32461 Trifolium pratense HOM05D007356 ORTHO05D009247 3.7e-17 94.0 375 27.5
Zm00001eb155990 Zea mays HOM05D007356 ORTHO05D009247 4.9e-17 93.6 419 25.3
Phvul.004G062800 Phaseolus vulgaris HOM05D007356 ORTHO05D009247 6.3e-17 93.2 378 27.2
Sopen02g030430 Solanum pennellii HOM05D007356 ORTHO05D009247 1.1e-16 92.4 369 27.6
Dinv34849 Davidia involucrata HOM05D007356 ORTHO05D009247 1.4e-16 92.0 369 27.4
Glyma.13G047100 Glycine max HOM05D007356 ORTHO05D009247 1.4e-16 92.0 373 26.0
Sabra17G0093200 Salix brachista HOM05D007356 ORTHO05D009247 1.4e-16 92.0 419 27.0
Haze_14128 Corylus avellana HOM05D007356 ORTHO05D009247 2.4e-16 91.3 448 25.7
AUR62008964 Chenopodium quinoa HOM05D007356 ORTHO05D009247 4.1e-16 90.5 387 26.9
Lalb_Chr06g0174681 Lupinus albus HOM05D007356 ORTHO05D009247 7.0e-16 89.7 372 26.3
Manes.01G108100 Manihot esculenta HOM05D007356 ORTHO05D009247 9.1e-16 89.4 418 27.3
Peaxi162Scf01327g00135 Petunia axillaris HOM05D007356 ORTHO05D009247 1.6e-15 88.6 358 27.4
Potri.017G112500 Populus trichocarpa HOM05D007356 ORTHO05D009247 2.7e-15 87.8 416 25.2
Ciclev10011716m.g Citrus clementina HOM05D007356 ORTHO05D009247 5.9e-15 86.7 374 26.5
arahy.Tifrunner.gnm1.ann1.3VIJ8X Arachis hypogaea HOM05D007356 ORTHO05D009247 1.0e-14 85.9 371 27.2
COL.COLO4_16192 Corchorus olitorius HOM05D007356 ORTHO05D009247 1.0e-14 85.9 369 26.0
Pp3c15_5150 Physcomitrium patens HOM05D007356 ORTHO05D009247 2.3e-14 84.7 190 35.3
TWI79G1397 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 2.3e-14 84.7 520 25.8
Solyc02g085740.4 Solanum lycopersicum HOM05D007356 ORTHO05D009247 3.8e-14 84.0 366 26.0
Nitab4.5_0008781g0020 Nicotiana tabacum HOM05D007356 ORTHO05D009247 5.0e-14 83.6 371 26.1
Hund13734 Selenicereus undatus HOM05D007356 ORTHO05D009247 5.0e-14 83.6 432 24.8
CANSAT64G1351 Cannabis sativa HOM05D007356 ORTHO05D009247 6.6e-14 83.2 386 25.6
arahy.Tifrunner.gnm1.ann1.33CL05 Arachis hypogaea HOM05D007356 ORTHO05D009247 8.6e-14 82.8 361 26.9
Thecc.04G137600 Theobroma cacao HOM05D007356 ORTHO05D009247 8.6e-14 82.8 369 23.8
CSS0016710 Camellia sinensis var. sinensis HOM05D007356 ORTHO05D009247 1.1e-13 82.4 296 28.4
Duzib133G0592 Durio zibethinus HOM05D007356 ORTHO05D009247 1.1e-13 82.4 413 23.0
Psat1g012920 Pisum sativum HOM05D007356 ORTHO05D009247 1.1e-13 82.4 371 27.0
Cfa007946 Carpinus fangiana HOM05D007356 ORTHO05D009247 1.5e-13 82.0 365 26.0
vmacro05573 Vaccinium macrocarpon HOM05D007356 ORTHO05D009247 1.5e-13 82.0 468 25.9
AUR62014539 Chenopodium quinoa HOM05D007356 ORTHO05D009247 2.5e-13 81.3 345 28.4
Lj2g0005002 Lotus japonicus HOM05D007356 ORTHO05D009247 2.5e-13 81.3 381 26.8
Atru.chr8.830 Acer truncatum HOM05D007356 ORTHO05D009247 4.2e-13 80.5 431 23.7
Actinidia18124 Actinidia chinensis HOM05D007356 ORTHO05D009247 4.2e-13 80.5 276 29.3
ECA232G5000 Erigeron canadensis HOM05D007356 ORTHO05D009247 7.2e-13 79.7 352 25.3
FAN14G2396 Fragaria x ananassa HOM05D007356 ORTHO05D009247 1.2e-12 79.0 525 25.7
HanXRQChr14g0438671 Helianthus annuus HOM05D007356 ORTHO05D009247 1.2e-12 79.0 354 25.7
Prupe.3G239800 Prunus persica HOM05D007356 ORTHO05D009247 4.7e-12 77.0 378 25.4
THA.LOC104820954 Tarenaya hassleriana HOM05D007356 ORTHO05D009247 4.7e-12 77.0 518 25.7
Gohir.A11G162300 Gossypium hirsutum HOM05D007356 ORTHO05D009247 6.1e-12 76.6 363 25.1
MELO3C023764.2 Cucumis melo HOM05D007356 ORTHO05D009247 8.0e-12 76.3 238 30.7
MD17G1074100 Malus domestica HOM05D007356 ORTHO05D009247 1.0e-11 75.9 369 24.9
Nitab4.5_0004118g0090 Nicotiana tabacum HOM05D007356 ORTHO05D009247 1.4e-11 75.5 315 26.0
SEGI_12886 Sequoiadendron giganteum HOM05D007356 ORTHO05D009247 1.4e-11 75.5 197 32.0
FvH4_6g45360 Fragaria vesca HOM05D007356 ORTHO05D009247 1.8e-11 75.1 371 26.1
Os01g0694200 Oryza sativa ssp. japonica HOM05D007356 ORTHO05D009247 1.8e-11 75.1 543 23.6
Potri.004G102400 Populus trichocarpa HOM05D007356 ORTHO05D009247 2.3e-11 74.7 140 39.3
Sed0002469 Sechium edule HOM05D007356 ORTHO05D009247 5.2e-11 73.6 258 28.3
Sc11g0008200 Simmondsia chinensis HOM05D007356 ORTHO05D009247 5.2e-11 73.6 197 29.9
TWI31G0521 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 5.2e-11 73.6 376 23.9
Medtr6g017235 Medicago truncatula HOM05D007356 ORTHO05D009247 2.0e-10 71.6 376 25.0
Gorai.007G180100 Gossypium raimondii HOM05D007356 ORTHO05D009247 2.6e-10 71.2 360 24.2
Ah.16g101940 Amaranthus hybridus HOM05D007356 ORTHO05D009247 5.7e-10 70.1 257 27.6
MD09G1084700 Malus domestica HOM05D007356 ORTHO05D009247 5.7e-10 70.1 370 23.8
VMungo0464G1268 Vigna mungo HOM05D007356 ORTHO05D009247 7.5e-10 69.7 382 24.3
Eucgr.J01469 Eucalyptus grandis HOM05D007356 ORTHO05D009247 2.2e-09 68.2 381 24.1
Gohir.D11G168600 Gossypium hirsutum HOM05D007356 ORTHO05D009247 2.2e-09 68.2 357 24.1
EL10Ac2g04607 Beta vulgaris HOM05D007356 ORTHO05D009247 3.7e-09 67.4 145 36.6
SGA_v2.0_scaffold33G13428 Striga asiatica HOM05D007356 ORTHO05D009247 6.3e-09 66.6 373 23.9
Migut.H00199 Erythranthe guttata HOM05D007356 ORTHO05D009247 8.3e-09 66.2 253 28.9
Cpa.g.sc179.26 Carica papaya HOM05D007356 ORTHO05D009247 5.4e-08 63.5 373 24.9
Oeu030757.2 Olea europaea HOM05D007356 ORTHO05D009247 2.7e-07 61.2 88 38.6
QL02p052579 Quercus lobata HOM05D007356 ORTHO05D009247 2.7e-07 61.2 97 38.1
unitig_60.g25515 Utricularia gibba HOM05D007356 ORTHO05D009247 6.6e-06 56.6 105 34.3


User provided reference genes

Program Settings