Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO144G0113 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 5.2e-193 677.6 342 100.0
SMO146G0097 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 9.2e-142 507.3 337 72.7
ATR0605G294 Amborella trichopoda HOM05D006024 ORTHO05D007505 2.3e-84 316.6 355 45.9
Sp3g18810 Schrenkiella parvula HOM05D006024 ORTHO05D007505 3.3e-83 312.8 347 46.4
A05p27990 Brassica napus HOM05D006024 ORTHO05D007505 5.7e-83 312.0 347 46.7
AagrBONN_evm.TU.Sc2ySwM_344.3372 Anthoceros agrestis HOM05D006024 ORTHO05D007505 8.2e-82 308.1 344 47.1
PSO339G6331 Papaver somniferum HOM05D006024 ORTHO05D007505 8.2e-82 308.1 344 46.5
Os09g0280300 Oryza sativa ssp. japonica HOM05D006024 ORTHO05D007505 1.4e-81 307.4 342 45.3
AT3G20790 Arabidopsis thaliana HOM05D006024 ORTHO05D007505 2.4e-81 306.6 348 45.1
Thecc.09G223300 Theobroma cacao HOM05D006024 ORTHO05D007505 9.1e-81 304.7 352 45.5
AL3G34710 Arabidopsis lyrata HOM05D006024 ORTHO05D007505 2.6e-80 303.1 348 44.8
CARHR096620 Cardamine hirsuta HOM05D006024 ORTHO05D007505 2.6e-80 303.1 349 45.3
Thhalv10021019m.g Eutrema salsugineum HOM05D006024 ORTHO05D007505 2.6e-80 303.1 348 45.4
THA.LOC104816910 Tarenaya hassleriana HOM05D006024 ORTHO05D007505 4.5e-80 302.4 339 44.5
BraA05t21682Z Brassica rapa HOM05D006024 ORTHO05D007505 7.7e-80 301.6 347 45.8
Carub.0003s2075 Capsella rubella HOM05D006024 ORTHO05D007505 1.3e-79 300.8 349 45.3
BolC5t33061H Brassica oleracea HOM05D006024 ORTHO05D007505 1.7e-79 300.4 347 45.8
Ciclev10015756m.g Citrus clementina HOM05D006024 ORTHO05D007505 1.7e-79 300.4 353 45.3
SEGI_39854 Sequoiadendron giganteum HOM05D006024 ORTHO05D007505 1.7e-79 300.4 352 46.3
Aqoxy1G00184 Aquilegia oxysepala HOM05D006024 ORTHO05D007505 3.8e-79 299.3 342 45.6
C05p43290 Brassica napus HOM05D006024 ORTHO05D007505 3.8e-79 299.3 347 45.5
CsaV3_4G023790 Cucumis sativus L. HOM05D006024 ORTHO05D007505 5.0e-79 298.9 339 46.3
Prupe.6G018500 Prunus persica HOM05D006024 ORTHO05D007505 5.0e-79 298.9 346 44.8
DCAR_002037 Daucus carota HOM05D006024 ORTHO05D007505 6.5e-79 298.5 342 45.0
Pp3c6_24290 Physcomitrium patens HOM05D006024 ORTHO05D007505 6.5e-79 298.5 346 47.1
MD11G1022800 Malus domestica HOM05D006024 ORTHO05D007505 1.1e-78 297.7 345 44.9
BcaB06g26149 Brassica carinata HOM05D006024 ORTHO05D007505 1.4e-78 297.4 347 45.0
Sed0023125 Sechium edule HOM05D006024 ORTHO05D007505 1.9e-78 297.0 349 45.8
Gorai.010G128200 Gossypium raimondii HOM05D006024 ORTHO05D007505 2.5e-78 296.6 352 44.3
Gohir.D06G112300 Gossypium hirsutum HOM05D006024 ORTHO05D007505 3.2e-78 296.2 352 44.3
HanXRQChr02g0056471 Helianthus annuus HOM05D006024 ORTHO05D007505 4.2e-78 295.8 344 45.1
CANSAT54G0336 Cannabis sativa HOM05D006024 ORTHO05D007505 5.5e-78 295.4 344 45.3
Hma1.2p1_2304F.1_g319350 Hydrangea macrophylla HOM05D006024 ORTHO05D007505 7.2e-78 295.0 344 44.8
FvH4_3g43551 Fragaria vesca HOM05D006024 ORTHO05D007505 1.6e-77 293.9 346 44.8
Mapoly0150s0011 Marchantia polymorpha HOM05D006024 ORTHO05D007505 1.6e-77 293.9 346 45.4
RcHm_v2.0_Chr5g0078111 Rosa chinensis HOM05D006024 ORTHO05D007505 1.6e-77 293.9 346 44.8
MELO3C014640.2 Cucumis melo HOM05D006024 ORTHO05D007505 2.1e-77 293.5 340 46.2
Lalb_Chr24g0396941 Lupinus albus HOM05D006024 ORTHO05D007505 2.1e-77 293.5 356 45.8
arahy.Tifrunner.gnm1.ann1.7L1RE9 Arachis hypogaea HOM05D006024 ORTHO05D007505 2.7e-77 293.1 350 46.0
CiPaw.13G165500 Carya illinoinensis HOM05D006024 ORTHO05D007505 2.7e-77 293.1 344 45.6
Lj4g0026168 Lotus japonicus HOM05D006024 ORTHO05D007505 2.7e-77 293.1 353 45.9
Glyma.13G342800 Glycine max HOM05D006024 ORTHO05D007505 3.6e-77 292.7 343 46.4
Oeu042179.3 Olea europaea HOM05D006024 ORTHO05D007505 3.6e-77 292.7 343 45.5
BcaC05g28281 Brassica carinata HOM05D006024 ORTHO05D007505 6.1e-77 292.0 347 44.7
AUR62000078 Chenopodium quinoa HOM05D006024 ORTHO05D007505 6.1e-77 292.0 333 46.8
VMungo1080G1755 Vigna mungo HOM05D004763 ORTHO05D007492 6.1e-77 292.0 343 46.9
Phvul.005G150400 Phaseolus vulgaris HOM05D006024 ORTHO05D007505 1.0e-76 291.2 343 46.1
TPR.G18832 Trifolium pratense HOM05D006024 ORTHO05D007505 1.0e-76 291.2 352 45.5
Cc01_g04140 Coffea canephora HOM05D006024 ORTHO05D007505 1.8e-76 290.4 343 43.7
MSTRG.12483 Avicennia marina HOM05D006024 ORTHO05D007505 5.2e-76 288.9 345 43.8
TWI60G1552 Tripterygium wilfordii HOM05D006024 ORTHO05D007505 5.2e-76 288.9 353 44.8
AUR62019251 Chenopodium quinoa HOM05D006024 ORTHO05D007505 6.7e-76 288.5 333 47.1
Lj3g0007180 Lotus japonicus HOM05D006024 ORTHO05D007505 6.7e-76 288.5 353 45.3
Eucgr.J00813 Eucalyptus grandis HOM05D006024 ORTHO05D007505 1.1e-75 287.7 340 45.6
Ca_01271_v3 Cicer arietinum L. HOM05D006024 ORTHO05D007505 2.0e-75 287.0 353 44.5
Sopen01g002620 Solanum pennellii HOM05D006024 ORTHO05D007505 2.0e-75 287.0 343 42.3
Cfa009695 Carpinus fangiana HOM05D006024 ORTHO05D007505 2.6e-75 286.6 341 45.5
MSTRG.21409 Avicennia marina HOM05D006024 ORTHO05D007505 4.4e-75 285.8 339 44.2
Solyc01g006630.3 Solanum lycopersicum HOM05D006024 ORTHO05D007505 7.4e-75 285.0 343 42.0
Potri.003G210900 Populus trichocarpa HOM05D006024 ORTHO05D007505 9.7e-75 284.6 352 42.6
Migut.N02293 Erythranthe guttata HOM05D006024 ORTHO05D007505 1.3e-74 284.3 356 43.8
Potri.T085501 Populus trichocarpa HOM05D006024 ORTHO05D007505 1.3e-74 284.3 353 42.5
Atru.chr3.2505 Acer truncatum HOM05D006024 ORTHO05D007505 2.2e-74 283.5 345 44.3
SMO116G0160 Selaginella moellendorffii HOM05D006024 ORTHO05D007505 2.8e-74 283.1 347 46.7
Nn7g36060 Nelumbo nucifera HOM05D006024 ORTHO05D007505 4.8e-74 282.3 343 44.6
Medtr2g098500 Medicago truncatula HOM05D006024 ORTHO05D007505 6.3e-74 282.0 355 43.4
GSVIVG01025335001 Vitis vinifera HOM05D006024 ORTHO05D007505 1.1e-73 281.2 343 43.1
PGR119G1295 Punica granatum HOM05D006024 ORTHO05D007505 1.4e-73 280.8 340 44.7
CSS0019947 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 1.8e-73 280.4 339 44.0
CSS0045029 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 1.8e-73 280.4 339 44.0
Cpa.g.sc84.110 Carica papaya HOM05D006024 ORTHO05D007505 2.4e-73 280.0 345 43.5
EL10Ac4g10317 Beta vulgaris HOM05D006024 ORTHO05D007505 3.1e-73 279.6 335 44.8
Dinv36303 Davidia involucrata HOM05D006024 ORTHO05D007505 3.1e-73 279.6 309 45.0
Duzib168G0763 Durio zibethinus HOM05D006024 ORTHO05D007505 4.1e-73 279.3 350 42.9
COL.COLO4_09894 Corchorus olitorius HOM05D006024 ORTHO05D007505 7.0e-73 278.5 342 43.3
Pp3c16_13070 Physcomitrium patens HOM05D006024 ORTHO05D007505 7.0e-73 278.5 374 43.0
Manes.14G014400 Manihot esculenta HOM05D006024 ORTHO05D007505 9.1e-73 278.1 354 41.8
FAN11G3540 Fragaria x ananassa HOM05D006024 ORTHO05D007505 1.7e-71 273.9 349 43.0
Aa31LG8G7600 Aethionema arabicum HOM05D006024 ORTHO05D007505 1.9e-70 270.4 348 42.2
Nitab4.5_0003796g0050 Nicotiana tabacum HOM05D006024 ORTHO05D007505 4.2e-70 269.2 343 41.7
Lsat_1_v5_gn_6_50101 Lactuca sativa HOM05D006024 ORTHO05D007505 9.4e-70 268.1 340 42.4
CAN.G388.68 Capsicum annuum HOM05D006024 ORTHO05D007505 1.2e-69 267.7 378 39.2
MBI04_g27131_MAGBIO Magnolia biondii HOM05D006024 ORTHO05D007505 1.2e-69 267.7 350 43.7
Peaxi162Scf00559g00415 Petunia axillaris HOM05D006024 ORTHO05D007505 3.6e-69 266.2 343 40.8
Hund22080 Selenicereus undatus HOM05D006024 ORTHO05D007505 3.6e-69 266.2 336 43.5
AagrBONN_evm.TU.Sc2ySwM_344.254 Anthoceros agrestis HOM05D006024 ORTHO05D007505 4.4e-67 259.2 351 39.0
QL01p006224 Quercus lobata HOM05D006024 ORTHO05D007505 4.4e-67 259.2 373 39.9
VMungo1080G1390 Vigna mungo HOM05D006024 ORTHO05D007505 2.8e-66 256.5 353 39.9
VMungo0251G0909 Vigna mungo HOM05D006024 ORTHO05D007505 1.4e-65 254.2 353 39.1
Lju1319A3G40 Lonicera japonica HOM05D006024 ORTHO05D007505 2.4e-65 253.4 365 41.9
Gohir.A06G108500 Gossypium hirsutum HOM05D006024 ORTHO05D007505 9.1e-65 251.5 344 41.0
Lj1A365G18 Lonicera japonica HOM05D006024 ORTHO05D007505 1.6e-64 250.8 369 40.9
arahy.Tifrunner.gnm1.ann1.3AB71G Arachis hypogaea HOM05D006024 ORTHO05D007505 2.7e-64 250.0 349 41.8
Mapoly0033s0066 Marchantia polymorpha HOM05D006024 ORTHO05D007505 3.5e-64 249.6 345 41.4
Migut.D00559 Erythranthe guttata HOM05D006024 ORTHO05D007505 2.2e-63 246.9 340 40.6
FAN11G0987 Fragaria x ananassa HOM05D006024 ORTHO05D007505 1.2e-61 241.1 349 40.1
Pp3c3_20310 Physcomitrium patens HOM05D006024 ORTHO05D007505 3.6e-61 239.6 342 38.6
vmacro04169 Vaccinium macrocarpon HOM05D006024 ORTHO05D007505 5.9e-56 222.2 460 33.7
SGA_v2.0_scaffold1G00800 Striga asiatica HOM05D006024 ORTHO05D007505 2.1e-53 213.8 340 37.9
unitig_8.g3081 Utricularia gibba HOM05D006024 ORTHO05D007505 7.5e-51 205.3 346 33.8
ECA233G0904 Erigeron canadensis HOM05D006024 ORTHO05D007505 3.7e-50 203.0 231 45.5
Rhsim13G0225400 Rhododendron simsii HOM05D006024 ORTHO05D007505 3.7e-50 203.0 245 43.7
TAR636G0774 Trochodendron aralioides HOM05D006024 ORTHO05D007505 1.1e-49 201.4 213 46.5
Zm00001eb094580 Zea mays HOM05D006024 ORTHO05D007505 1.8e-49 200.7 205 48.3
Sc06g0004470 Simmondsia chinensis HOM05D006024 ORTHO05D007505 3.1e-49 199.9 243 43.2
Haze_23046 Corylus avellana HOM05D006024 ORTHO05D007505 1.1e-41 174.9 300 35.7
ClCG02G023630 Citrullus lanatus HOM05D006024 ORTHO05D007505 2.1e-37 160.6 183 46.4
Nitab4.5_0008137g0040 Nicotiana tabacum HOM05D006024 ORTHO05D007505 4.9e-34 149.4 336 31.5
Cfa023900 Carpinus fangiana HOM05D006024 ORTHO05D007505 8.6e-31 138.7 353 29.7
Cre01.g023300 Chlamydomonas reinhardtii HOM05D006024 ORTHO05D007505 4.7e-29 132.9 395 28.6
HPP92_000457 Vanilla planifolia HOM05D006024 ORTHO05D007505 1.1e-28 131.7 147 46.3
FAN16G2307 Fragaria x ananassa HOM05D006024 ORTHO05D007505 1.4e-25 121.3 147 42.9
TAR636G1381 Trochodendron aralioides HOM05D006024 ORTHO05D007505 3.3e-22 110.2 179 36.9
Psat7g086040 Pisum sativum HOM05D006024 ORTHO05D007505 6.8e-20 102.4 99 48.5
Sc06g0004480 Simmondsia chinensis HOM05D006024 ORTHO05D007505 1.9e-17 94.4 106 46.2
ECA233G1997 Erigeron canadensis HOM05D006024 ORTHO05D007505 6.0e-16 89.4 100 46.0
Rhsim13G0225300 Rhododendron simsii HOM05D006024 ORTHO05D007505 1.5e-14 84.7 85 50.6
Psat5g288680 Pisum sativum HOM05D006024 ORTHO05D007505 5.3e-12 76.3 92 42.4
Actinidia16298 Actinidia chinensis HOM05D006024 ORTHO05D007505 1.3e-10 71.6 89 43.8
Psat6g204000 Pisum sativum HOM05D006024 ORTHO05D007505 2.9e-10 70.5 135 35.6
Glyma.15G031500 Glycine max HOM05D006024 ORTHO05D007505 1.2e-08 65.1 123 35.0
CSS0042824 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 1.0e-07 62.0 86 39.5
CSS0049558 Camellia sinensis var. sinensis HOM05D006024 ORTHO05D007505 1.0e-07 62.0 83 41.0


User provided reference genes

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