Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO144G0057 Selaginella moellendorffii HOM05D001524 ORTHO05D001392 2.9e-27 124.4 59 100.0
Zm00001eb221080 Zea mays HOM05D001524 ORTHO05D001392 6.7e-08 60.1 49 55.1
SMO144G0206 Selaginella moellendorffii HOM05D001524 ORTHO05D001392 8.8e-08 59.7 49 53.1
SMO144G0164 Selaginella moellendorffii HOM05D001524 ORTHO05D001392 2.0e-07 58.5 51 51.0
SMO144G0190 Selaginella moellendorffii HOM05D001524 ORTHO05D001392 2.0e-07 58.5 51 51.0
SMO335G0019 Selaginella moellendorffii HOM05D001524 ORTHO05D001392 2.0e-07 58.5 51 51.0
SMO229G0050 Selaginella moellendorffii HOM05D001524 ORTHO05D001392 3.3e-07 57.8 51 51.0
Zm00001eb044960 Zea mays HOM05D001524 ORTHO05D001392 4.4e-07 57.4 49 51.0
SMO144G0004 Selaginella moellendorffii HOM05D001524 ORTHO05D001392 5.7e-07 57.0 51 51.0
SMO229G0032 Selaginella moellendorffii HOM05D001524 ORTHO05D001392 7.4e-07 56.6 51 49.0
FvH4_2g05010 Fragaria vesca HOM05D001524 ORTHO05D001392 9.7e-07 56.2 49 46.9
Zm00001eb221040 Zea mays HOM05D001524 ORTHO05D001392 9.7e-07 56.2 49 51.0
Atru.chr5.2476 Acer truncatum HOM05D001524 ORTHO05D001392 1.3e-06 55.8 51 51.0
AT2G15220 Arabidopsis thaliana HOM05D001524 ORTHO05D001392 1.3e-06 55.8 49 49.0
Nn3g18310 Nelumbo nucifera HOM05D001524 ORTHO05D001392 1.3e-06 55.8 49 49.0
RcHm_v2.0_Chr6g0254801 Rosa chinensis HOM05D001524 ORTHO05D001392 1.3e-06 55.8 49 46.9
RcHm_v2.0_Chr6g0254841 Rosa chinensis HOM05D001524 ORTHO05D001392 1.3e-06 55.8 49 46.9
SMO144G0101 Selaginella moellendorffii HOM05D001524 ORTHO05D001392 1.3e-06 55.8 51 49.0
CSS0007588 Camellia sinensis var. sinensis HOM05D001524 ORTHO05D001392 3.7e-06 54.3 58 46.6
CARHR105610 Cardamine hirsuta HOM05D001524 ORTHO05D001392 3.7e-06 54.3 49 46.9
RcHm_v2.0_Chr6g0254791 Rosa chinensis HOM05D001524 ORTHO05D001392 3.7e-06 54.3 49 46.9
Atru.chr3.2819 Acer truncatum HOM05D001524 ORTHO05D001392 4.8e-06 53.9 51 47.1
Atru.chr5.2483 Acer truncatum HOM05D001524 ORTHO05D001392 4.8e-06 53.9 51 47.1
Carub.0003s2906 Capsella rubella HOM05D001524 ORTHO05D001392 4.8e-06 53.9 49 46.9
ClCG02G006460 Citrullus lanatus HOM05D001524 ORTHO05D001392 4.8e-06 53.9 49 49.0
PGR042G2205 Punica granatum HOM05D001524 ORTHO05D001392 4.8e-06 53.9 51 49.0
Actinidia05498 Actinidia chinensis HOM05D001524 ORTHO05D001392 6.3e-06 53.5 59 42.4
CANSAT25G1469 Cannabis sativa HOM05D001524 ORTHO05D001392 6.3e-06 53.5 49 44.9
CANSAT25G2328 Cannabis sativa HOM05D001524 ORTHO05D001392 6.3e-06 53.5 49 44.9
Cfa004594 Carpinus fangiana HOM05D001524 ORTHO05D001392 6.3e-06 53.5 51 43.1
Haze_10192 Corylus avellana HOM05D001524 ORTHO05D001392 6.3e-06 53.5 51 43.1
Thhalv10022957m.g Eutrema salsugineum HOM05D001524 ORTHO05D001392 6.3e-06 53.5 49 46.9
Thhalv10022994m.g Eutrema salsugineum HOM05D001524 ORTHO05D001392 6.3e-06 53.5 49 46.9
HanXRQChr03g0070321 Helianthus annuus HOM05D001524 ORTHO05D001392 6.3e-06 53.5 49 44.9
Thecc.02G109500 Theobroma cacao HOM05D001524 ORTHO05D001392 6.3e-06 53.5 48 45.8
CANSAT25G1296 Cannabis sativa HOM05D001524 ORTHO05D001392 8.2e-06 53.1 51 45.1
CARHR105570 Cardamine hirsuta HOM05D001524 ORTHO05D001392 8.2e-06 53.1 49 46.9
CsaV3_7G008240 Cucumis sativus L. HOM05D001524 ORTHO05D001392 8.2e-06 53.1 49 46.9
FvH4_2g05000 Fragaria vesca HOM05D001524 ORTHO05D001392 8.2e-06 53.1 49 46.9
FAN15G0751 Fragaria x ananassa HOM05D001524 ORTHO05D001392 8.2e-06 53.1 49 46.9
FAN20G1004 Fragaria x ananassa HOM05D001524 ORTHO05D001392 8.2e-06 53.1 49 46.9
FAN24G3237 Fragaria x ananassa HOM05D001524 ORTHO05D001392 8.2e-06 53.1 49 46.9
Lsat_1_v5_gn_9_112561 Lactuca sativa HOM05D001524 ORTHO05D001392 8.2e-06 53.1 49 44.9
Manes.07G071148 Manihot esculenta HOM05D001524 ORTHO05D001392 8.2e-06 53.1 51 47.1


User provided reference genes

Program Settings