Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO144G0045 Selaginella moellendorffii HOM05D006609 ORTHO05D008551 9.1e-87 323.6 165 100.0
FvH4_2g35350 Fragaria vesca HOM05D006609 ORTHO05D008551 4.0e-26 122.1 154 42.9
RcHm_v2.0_Chr6g0306561 Rosa chinensis HOM05D006609 ORTHO05D008551 6.9e-26 121.3 154 42.2
CiPaw.07G203500 Carya illinoinensis HOM05D006609 ORTHO05D008551 4.5e-25 118.6 154 42.2
CANSAT25G3446 Cannabis sativa HOM05D006609 ORTHO05D008551 5.8e-25 118.2 154 40.3
Cfa013375 Carpinus fangiana HOM05D006609 ORTHO05D008551 7.6e-25 117.9 154 42.2
GSVIVG01035613001 Vitis vinifera HOM05D006609 ORTHO05D008551 7.6e-25 117.9 154 39.6
Prupe.1G447200 Prunus persica HOM05D006609 ORTHO05D008551 3.8e-24 115.5 154 39.6
ATR0705G113 Amborella trichopoda HOM05D006609 ORTHO05D008551 6.4e-24 114.8 154 39.0
TWI63G1544 Tripterygium wilfordii HOM05D006609 ORTHO05D008551 6.4e-24 114.8 154 38.3
Hma1.2p1_1138F.1_g260815 Hydrangea macrophylla HOM05D006609 ORTHO05D008551 1.4e-23 113.6 154 40.9
MD15G1092400 Malus domestica HOM05D006609 ORTHO05D008551 1.4e-23 113.6 154 40.3
RhsimUnG0061900 Rhododendron simsii HOM05D006609 ORTHO05D008551 2.4e-23 112.8 157 40.1
Manes.16G074700 Manihot esculenta HOM05D006609 ORTHO05D008551 4.2e-23 112.1 154 41.6
CARHR201580 Cardamine hirsuta HOM05D006609 ORTHO05D008551 5.4e-23 111.7 154 42.2
Gohir.D05G047900 Gossypium hirsutum HOM05D006609 ORTHO05D008551 5.4e-23 111.7 164 37.2
Dinv27894 Davidia involucrata HOM05D006609 ORTHO05D008551 7.1e-23 111.3 154 39.0
A02p01130 Brassica napus HOM05D006609 ORTHO05D008551 9.3e-23 110.9 154 42.9
BraA02t05092Z Brassica rapa HOM05D006609 ORTHO05D008551 9.3e-23 110.9 154 42.9
Duzib168G0257 Durio zibethinus HOM05D006609 ORTHO05D008551 9.3e-23 110.9 164 37.2
AL6G22350 Arabidopsis lyrata HOM05D006609 ORTHO05D008551 1.2e-22 110.5 154 42.2
Eucgr.C00603 Eucalyptus grandis HOM05D006609 ORTHO05D008551 1.2e-22 110.5 164 37.2
Gorai.009G049200 Gossypium raimondii HOM05D006609 ORTHO05D008551 1.2e-22 110.5 164 36.6
PGR031G0123 Punica granatum HOM05D006609 ORTHO05D008551 1.2e-22 110.5 164 38.4
Hund03393 Selenicereus undatus HOM05D006609 ORTHO05D008551 1.6e-22 110.2 154 40.9
Actinidia13339 Actinidia chinensis HOM05D006609 ORTHO05D008551 2.1e-22 109.8 154 37.0
Aa31LG3G15550 Aethionema arabicum HOM05D006609 ORTHO05D008551 2.1e-22 109.8 154 42.2
BcaC03g13384 Brassica carinata HOM05D006609 ORTHO05D008551 2.1e-22 109.8 154 42.2
C02p05310 Brassica napus HOM05D006609 ORTHO05D008551 2.1e-22 109.8 154 42.2
BolC2t06479H Brassica oleracea HOM05D006609 ORTHO05D008551 2.1e-22 109.8 154 42.2
Carub.0006s1012 Capsella rubella HOM05D006609 ORTHO05D008551 2.1e-22 109.8 154 41.6
Rhsim02G0176600 Rhododendron simsii HOM05D006609 ORTHO05D008551 2.1e-22 109.8 153 39.9
FAN27G2415 Fragaria x ananassa HOM05D006609 ORTHO05D008551 2.7e-22 109.4 154 40.9
CSS0000910 Camellia sinensis var. sinensis HOM05D006609 ORTHO05D008551 3.5e-22 109.0 154 38.3
FAN20G1237 Fragaria x ananassa HOM05D006609 ORTHO05D008551 3.5e-22 109.0 154 40.9
arahy.Tifrunner.gnm1.ann1.519I88 Arachis hypogaea HOM05D006609 ORTHO05D008551 4.6e-22 108.6 157 38.2
arahy.Tifrunner.gnm1.ann1.TZ2NYQ Arachis hypogaea HOM05D006609 ORTHO05D008551 4.6e-22 108.6 157 38.2
Glyma.17G192700 Glycine max HOM05D006609 ORTHO05D008551 6.0e-22 108.2 154 38.3
FAN15G1983 Fragaria x ananassa HOM05D006609 ORTHO05D008551 1.0e-21 107.5 154 40.3
Gohir.A05G046200 Gossypium hirsutum HOM05D006609 ORTHO05D008551 1.0e-21 107.5 164 36.0
Sc09g0009360 Simmondsia chinensis HOM05D006609 ORTHO05D008551 1.3e-21 107.1 154 38.3
THA.LOC104808485 Tarenaya hassleriana HOM05D006609 ORTHO05D008551 1.8e-21 106.7 154 40.9
Potri.006G237600 Populus trichocarpa HOM05D006609 ORTHO05D008551 2.3e-21 106.3 154 37.0
BraA10t44672Z Brassica rapa HOM05D006609 ORTHO05D008551 3.0e-21 105.9 154 40.3
VMungo0647G0700 Vigna mungo HOM05D006609 ORTHO05D008551 3.0e-21 105.9 154 37.7
MBI04_g06585_MAGBIO Magnolia biondii HOM05D006609 ORTHO05D008551 5.1e-21 105.1 164 36.0
Psat6g037080 Pisum sativum HOM05D006609 ORTHO05D008551 5.1e-21 105.1 154 37.0
TAR626G1286 Trochodendron aralioides HOM05D006609 ORTHO05D008551 5.1e-21 105.1 154 36.4
A10p26110 Brassica napus HOM05D006609 ORTHO05D008551 6.7e-21 104.8 154 40.3
Sp6g31980 Schrenkiella parvula HOM05D006609 ORTHO05D008551 6.7e-21 104.8 154 39.0
QL12p041270 Quercus lobata HOM05D006609 ORTHO05D008551 1.1e-20 104.0 164 36.6
Thecc.09G046100 Theobroma cacao HOM05D006609 ORTHO05D008551 1.1e-20 104.0 154 37.0
TPR.G24534 Trifolium pratense HOM05D006609 ORTHO05D008551 1.1e-20 104.0 154 37.0
Thhalv10014470m.g Eutrema salsugineum HOM05D006609 ORTHO05D008551 1.5e-20 103.6 154 39.6
Lj1g0027455 Lotus japonicus HOM05D006609 ORTHO05D008551 1.5e-20 103.6 154 38.3
COL.COLO4_20980 Corchorus olitorius HOM05D006609 ORTHO05D008551 1.9e-20 103.2 164 34.8
Ah.16g105840 Amaranthus hybridus HOM05D006609 ORTHO05D008551 2.5e-20 102.8 154 39.0
Peaxi162Scf00064g01521 Petunia axillaris HOM05D006609 ORTHO05D008551 2.5e-20 102.8 154 37.0
Aqoxy7G01461 Aquilegia oxysepala HOM05D006609 ORTHO05D008551 3.3e-20 102.4 164 35.4
Migut.A00197 Erythranthe guttata HOM05D006609 ORTHO05D008551 3.3e-20 102.4 164 34.1
PSO824G0011 Papaver somniferum HOM05D006609 ORTHO05D008551 3.3e-20 102.4 154 36.4
SalBow4G0386 Salvia bowleyana HOM05D006609 ORTHO05D008551 3.3e-20 102.4 154 37.0
CDE02G0347 Ceratophyllum demersum HOM05D006609 ORTHO05D008551 4.3e-20 102.1 154 35.7
Ciclev10009282m.g Citrus clementina HOM05D006609 ORTHO05D008551 7.4e-20 101.3 153 37.9
Ca_03364_v3 Cicer arietinum L. HOM05D006609 ORTHO05D008551 9.6e-20 100.9 154 37.0
Cc08_g09720 Coffea canephora HOM05D006609 ORTHO05D008551 1.6e-19 100.1 157 35.0
MD08G1113000 Malus domestica HOM05D006609 ORTHO05D008551 2.1e-19 99.8 154 38.3
PSO173G0006 Papaver somniferum HOM05D006609 ORTHO05D008551 2.1e-19 99.8 154 34.4
Medtr1g007120 Medicago truncatula HOM05D006609 ORTHO05D008551 4.8e-19 98.6 154 37.0
Nn8g39112 Nelumbo nucifera HOM05D006609 ORTHO05D008551 6.2e-19 98.2 154 37.0
Phvul.001G063300 Phaseolus vulgaris HOM05D006609 ORTHO05D008551 1.4e-18 97.1 154 35.7
Solyc12g095820.3 Solanum lycopersicum HOM05D006609 ORTHO05D008551 1.4e-18 97.1 154 35.1
Sopen12g031720 Solanum pennellii HOM05D006609 ORTHO05D008551 1.4e-18 97.1 154 35.1
PGSC0003DMG400029395 Solanum tuberosum HOM05D006609 ORTHO05D008551 1.4e-18 97.1 154 35.1
CAN.G208.62 Capsicum annuum HOM05D006609 ORTHO05D008551 1.8e-18 96.7 154 35.1
Lalb_Chr24g0402671 Lupinus albus HOM05D006609 ORTHO05D008551 2.4e-18 96.3 155 37.4
AUR62042442 Chenopodium quinoa HOM05D006609 ORTHO05D008551 4.0e-18 95.5 154 39.0
BcaC04g19208 Brassica carinata HOM05D006609 ORTHO05D008551 1.5e-17 93.6 154 39.0
BolC9t59347H Brassica oleracea HOM05D006609 ORTHO05D008551 1.5e-17 93.6 154 39.0
Lsat_1_v5_gn_6_22680 Lactuca sativa HOM05D006609 ORTHO05D008551 1.5e-17 93.6 154 31.2
MSTRG.25911 Avicennia marina HOM05D006609 ORTHO05D008551 3.4e-17 92.4 154 30.5
AT5G11640 Arabidopsis thaliana HOM05D006609 ORTHO05D008551 7.6e-17 91.3 103 43.7
ClCG11G015120 Citrullus lanatus HOM05D006609 ORTHO05D008551 7.6e-17 91.3 155 37.4
MELO3C003467.2 Cucumis melo HOM05D006609 ORTHO05D008551 1.3e-16 90.5 155 38.1
HPP92_021778 Vanilla planifolia HOM05D006609 ORTHO05D008551 1.7e-16 90.1 154 31.8
Haze_21897 Corylus avellana HOM05D006609 ORTHO05D008551 2.2e-16 89.7 154 37.0
CsaV3_3G048520 Cucumis sativus L. HOM05D006609 ORTHO05D008551 3.8e-16 89.0 155 37.4
HanXRQChr13g0402211 Helianthus annuus HOM05D006609 ORTHO05D008551 4.9e-16 88.6 154 31.8
Sed0023433 Sechium edule HOM05D006609 ORTHO05D008551 2.4e-15 86.3 155 34.8
BcaB08g37036 Brassica carinata HOM05D006609 ORTHO05D008551 3.2e-15 85.9 99 42.4
FAN24G0356 Fragaria x ananassa HOM05D006609 ORTHO05D008551 3.2e-15 85.9 107 43.9
FAN24G3337 Fragaria x ananassa HOM05D006609 ORTHO05D008551 3.2e-15 85.9 107 43.9
C09p65180 Brassica napus HOM05D006609 ORTHO05D008551 7.1e-15 84.7 154 37.7
Atru.chr7.2079 Acer truncatum HOM05D006609 ORTHO05D008551 9.3e-15 84.3 144 34.0
Zm00001eb337980 Zea mays HOM05D006609 ORTHO05D008551 2.7e-14 82.8 161 36.0
Os01g0200400 Oryza sativa ssp. japonica HOM05D006609 ORTHO05D008551 2.3e-13 79.7 154 34.4
AUR62009264 Chenopodium quinoa HOM05D006609 ORTHO05D008551 3.9e-13 79.0 103 43.7
Nitab4.5_0001737g0100 Nicotiana tabacum HOM05D006609 ORTHO05D008551 1.5e-12 77.0 156 34.0
Sabra06G0185800 Salix brachista HOM05D006609 ORTHO05D008551 2.5e-12 76.3 202 29.2
Nitab4.5_0001309g0120 Nicotiana tabacum HOM05D006609 ORTHO05D008551 8.1e-11 71.2 149 30.9
Lsat_1_v5_gn_5_12101 Lactuca sativa HOM05D006609 ORTHO05D008551 3.1e-10 69.3 138 29.0
SEGI_39152 Sequoiadendron giganteum HOM05D006609 ORTHO05D008551 1.2e-09 67.4 88 39.8
EL10Ac2g04002 Beta vulgaris HOM05D006609 ORTHO05D008551 1.7e-08 63.5 78 42.3
SGA_v2.0_scaffold243G44286 Striga asiatica HOM05D006609 ORTHO05D008551 4.9e-08 62.0 156 29.5
FAN24G1965 Fragaria x ananassa HOM05D006609 ORTHO05D008551 7.1e-07 58.2 73 42.5
BcaNung02663 Brassica carinata HOM05D006609 ORTHO05D008551 7.9e-06 54.7 62 46.8


User provided reference genes

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