Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO143G0271 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 3.6e-97 358.2 177 100.0
SMO265G0003 Selaginella moellendorffii HOM05D007308 ORTHO05D009157 2.8e-73 278.9 154 90.9
Mapoly0021s0141 Marchantia polymorpha HOM05D007308 ORTHO05D009157 1.6e-52 209.9 173 59.0
Pp3c19_15880 Physcomitrium patens HOM05D007308 ORTHO05D009157 3.5e-52 208.8 161 62.1
AagrBONN_evm.TU.Sc2ySwM_344.2550 Anthoceros agrestis HOM05D007308 ORTHO05D009157 7.8e-52 207.6 178 59.0
Os01g0965900 Oryza sativa ssp. japonica HOM05D007308 ORTHO05D009157 3.0e-51 205.7 158 62.0
Pp3c14_20980 Physcomitrium patens HOM05D007308 ORTHO05D009157 7.3e-50 201.1 162 59.9
Nn2g14273 Nelumbo nucifera HOM05D007308 ORTHO05D009157 1.2e-49 200.3 158 61.4
CSS0004692 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 8.1e-49 197.6 154 62.3
MBI17_g22148_MAGBIO Magnolia biondii HOM05D007308 ORTHO05D009157 1.4e-48 196.8 157 61.8
Prupe.2G071800 Prunus persica HOM05D007308 ORTHO05D009157 1.4e-48 196.8 172 55.2
HPP92_005473 Vanilla planifolia HOM05D007308 ORTHO05D009157 1.4e-48 196.8 157 59.9
Zm00001eb362380 Zea mays HOM05D007308 ORTHO05D009157 1.4e-48 196.8 163 57.1
CANSAT56G1109 Cannabis sativa HOM05D007308 ORTHO05D009157 3.1e-48 195.7 157 62.4
Medtr1g090630 Medicago truncatula HOM05D007308 ORTHO05D009157 4.0e-48 195.3 156 61.5
arahy.Tifrunner.gnm1.ann1.ZU0NEU Arachis hypogaea HOM05D007308 ORTHO05D009157 8.9e-48 194.1 168 56.0
CDE02G0914 Ceratophyllum demersum HOM05D007308 ORTHO05D009157 8.9e-48 194.1 160 60.0
Lj5g0023307 Lotus japonicus HOM05D007308 ORTHO05D009157 8.9e-48 194.1 158 60.1
Potri.010G241700 Populus trichocarpa HOM05D007308 ORTHO05D009157 8.9e-48 194.1 152 62.5
PGSC0003DMG400001980 Solanum tuberosum HOM05D007308 ORTHO05D009157 8.9e-48 194.1 153 62.7
arahy.Tifrunner.gnm1.ann1.I1QH9V Arachis hypogaea HOM05D007308 ORTHO05D009157 2.0e-47 193.0 152 60.5
Nitab4.5_0001047g0020 Nicotiana tabacum HOM05D007308 ORTHO05D009157 2.6e-47 192.6 153 61.4
Cc02_g09470 Coffea canephora HOM05D007308 ORTHO05D009157 3.4e-47 192.2 153 60.8
GSVIVG01034647001 Vitis vinifera HOM05D007308 ORTHO05D009157 3.4e-47 192.2 161 59.0
SalBow3G3836 Salvia bowleyana HOM05D007308 ORTHO05D009157 4.4e-47 191.8 154 61.7
Eucgr.J00279 Eucalyptus grandis HOM05D007308 ORTHO05D009157 5.8e-47 191.4 156 62.8
Rhsim09G0141500 Rhododendron simsii HOM05D007308 ORTHO05D009157 7.6e-47 191.0 167 57.5
THA.LOC104816471 Tarenaya hassleriana HOM05D007308 ORTHO05D009157 9.9e-47 190.7 152 61.2
Lalb_Chr02g0150981 Lupinus albus HOM05D007308 ORTHO05D009157 1.3e-46 190.3 152 61.2
Hund06794 Selenicereus undatus HOM05D007308 ORTHO05D009157 1.3e-46 190.3 153 61.4
Gorai.013G010700 Gossypium raimondii HOM05D007308 ORTHO05D009157 1.7e-46 189.9 167 53.9
AL6G14490 Arabidopsis lyrata HOM05D007308 ORTHO05D009157 2.2e-46 189.5 175 56.6
Sabra08G0011300 Salix brachista HOM05D007308 ORTHO05D009157 2.2e-46 189.5 154 61.0
Thecc.10G116800 Theobroma cacao HOM05D007308 ORTHO05D009157 2.2e-46 189.5 165 58.2
AT5G04830 Arabidopsis thaliana HOM05D007308 ORTHO05D009157 2.9e-46 189.1 167 56.9
Duzib106G1839 Durio zibethinus HOM05D007308 ORTHO05D009157 2.9e-46 189.1 159 59.7
vmacro10315 Vaccinium macrocarpon HOM05D007308 ORTHO05D009157 2.9e-46 189.1 167 55.1
A03p01870 Brassica napus HOM05D007308 ORTHO05D009157 3.8e-46 188.7 176 55.7
BraA03t09557Z Brassica rapa HOM05D007308 ORTHO05D009157 3.8e-46 188.7 176 55.7
Glyma.20G194000 Glycine max HOM05D007308 ORTHO05D009157 3.8e-46 188.7 179 54.2
Gohir.D13G010000 Gossypium hirsutum HOM05D007308 ORTHO05D009157 3.8e-46 188.7 174 52.3
PGR044G1814 Punica granatum HOM05D007308 ORTHO05D009157 3.8e-46 188.7 155 58.1
MD07G1062000 Malus domestica HOM05D007308 ORTHO05D009157 4.9e-46 188.3 163 58.3
Sabra10G0189200 Salix brachista HOM05D000139 ORTHO05D000103 4.9e-46 188.3 152 61.2
Glyma.10G196200 Glycine max HOM05D007308 ORTHO05D009157 6.4e-46 188.0 179 54.2
Gohir.A13G009300 Gossypium hirsutum HOM05D007308 ORTHO05D009157 1.9e-45 186.4 174 52.3
Sp6g38000 Schrenkiella parvula HOM05D007308 ORTHO05D009157 1.9e-45 186.4 157 59.9
ATR0772G202 Amborella trichopoda HOM05D007308 ORTHO05D009157 2.4e-45 186.0 167 54.5
Aqoxy1G00692 Aquilegia oxysepala HOM05D007308 ORTHO05D009157 2.4e-45 186.0 158 58.9
Dinv08592 Davidia involucrata HOM05D007308 ORTHO05D009157 3.2e-45 185.7 157 59.2
VMungo0720G2616 Vigna mungo HOM05D007308 ORTHO05D009157 3.2e-45 185.7 170 55.3
Ciclev10016517m.g Citrus clementina HOM05D007308 ORTHO05D009157 4.2e-45 185.3 157 58.6
Peaxi162Scf00725g00524 Petunia axillaris HOM05D007308 ORTHO05D009157 4.2e-45 185.3 164 56.1
Sc20g0001110 Simmondsia chinensis HOM05D007308 ORTHO05D009157 4.2e-45 185.3 155 60.0
MSTRG.27555 Avicennia marina HOM05D007308 ORTHO05D009157 7.1e-45 184.5 152 60.5
BcaB01g05916 Brassica carinata HOM05D007308 ORTHO05D009157 7.1e-45 184.5 158 58.2
C03p02230 Brassica napus HOM05D007308 ORTHO05D009157 7.1e-45 184.5 158 58.2
BolC3t12774H Brassica oleracea HOM05D007308 ORTHO05D009157 7.1e-45 184.5 158 58.2
PSO339G2601 Papaver somniferum HOM05D007308 ORTHO05D009157 7.1e-45 184.5 170 52.9
PGR044G1810 Punica granatum HOM05D007308 ORTHO05D009157 7.1e-45 184.5 163 55.2
Phvul.007G138800 Phaseolus vulgaris HOM05D007308 ORTHO05D009157 9.3e-45 184.1 157 58.6
TWI15G0952 Tripterygium wilfordii HOM05D007308 ORTHO05D009157 1.2e-44 183.7 170 55.3
TAR623G1715 Trochodendron aralioides HOM05D007308 ORTHO05D009157 1.2e-44 183.7 157 59.2
CiPaw.13G043100 Carya illinoinensis HOM05D007308 ORTHO05D009157 1.6e-44 183.3 155 59.4
A10p31380 Brassica napus HOM05D007308 ORTHO05D009157 2.1e-44 183.0 159 57.9
Thhalv10014751m.g Eutrema salsugineum HOM05D007308 ORTHO05D009157 2.1e-44 183.0 157 59.9
QL04p047115 Quercus lobata HOM05D007308 ORTHO05D009157 2.1e-44 183.0 153 59.5
BcaC06g32190 Brassica carinata HOM05D007308 ORTHO05D009157 2.7e-44 182.6 159 57.9
PSO384G3587 Papaver somniferum HOM05D007308 ORTHO05D009157 2.7e-44 182.6 159 56.0
CsaV3_5G035250 Cucumis sativus L. HOM05D007308 ORTHO05D009157 3.5e-44 182.2 175 54.3
ClCG05G021890 Citrullus lanatus HOM05D007308 ORTHO05D009157 6.0e-44 181.4 175 52.6
Aa31LG11G5650 Aethionema arabicum HOM05D007308 ORTHO05D009157 1.0e-43 180.6 156 57.7
C09p72050 Brassica napus HOM05D007308 ORTHO05D009157 1.0e-43 180.6 159 57.2
Lsat_1_v5_gn_3_53161 Lactuca sativa HOM05D007308 ORTHO05D009157 1.0e-43 180.6 163 57.1
CARHR208450 Cardamine hirsuta HOM05D007308 ORTHO05D009157 1.3e-43 180.3 167 56.3
Carub.0006s0371 Capsella rubella HOM05D007308 ORTHO05D009157 1.7e-43 179.9 167 54.5
Sed0004755 Sechium edule HOM05D007308 ORTHO05D009157 1.7e-43 179.9 156 57.7
HanXRQChr05g0147281 Helianthus annuus HOM05D007308 ORTHO05D009157 2.3e-43 179.5 159 57.2
Lj3C924T9 Lonicera japonica HOM05D007308 ORTHO05D009157 3.9e-43 178.7 200 50.5
Migut.F00856 Erythranthe guttata HOM05D007308 ORTHO05D009157 5.1e-43 178.3 153 58.2
SEGI_14438 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 5.1e-43 178.3 158 55.7
BraA10t45184Z Brassica rapa HOM05D007308 ORTHO05D009157 8.7e-43 177.6 166 56.0
BolC9t59950H Brassica oleracea HOM05D007308 ORTHO05D009157 1.1e-42 177.2 166 56.0
Lalb_Chr21g0312841 Lupinus albus HOM05D007308 ORTHO05D009157 1.1e-42 177.2 152 55.9
CSS0017788 Camellia sinensis var. sinensis HOM05D007308 ORTHO05D009157 1.5e-42 176.8 151 57.0
ECA232G3668 Erigeron canadensis HOM05D007308 ORTHO05D009157 1.9e-42 176.4 159 56.6
Hma1.2p1_0457F.1_g156910 Hydrangea macrophylla HOM05D007308 ORTHO05D009157 5.6e-42 174.9 157 54.1
Sed0002245 Sechium edule HOM05D007308 ORTHO05D009157 7.3e-42 174.5 176 51.1
unitig_32.g11899 Utricularia gibba HOM05D007308 ORTHO05D009157 1.8e-40 169.9 152 54.6
Solyc11g006505.1 Solanum lycopersicum HOM05D007308 ORTHO05D009157 5.3e-40 168.3 151 58.3
Sopen11g002410 Solanum pennellii HOM05D007308 ORTHO05D009157 2.0e-39 166.4 143 59.4
SGA_v2.0_scaffold272G46352 Striga asiatica HOM05D007308 ORTHO05D009157 4.9e-38 161.8 185 49.2
SEGI_29808 Sequoiadendron giganteum HOM05D007308 ORTHO05D009157 4.2e-37 158.7 131 59.5
Pp3c1_28520 Physcomitrium patens HOM05D007308 ORTHO05D009157 9.3e-37 157.5 120 65.8
Haze_03470 Corylus avellana HOM05D007308 ORTHO05D009157 1.2e-36 157.1 167 50.3
MELO3C012339.2 Cucumis melo HOM05D007308 ORTHO05D009157 1.7e-35 153.3 161 50.9
CiPaw.14G034600 Carya illinoinensis HOM05D007308 ORTHO05D009157 1.5e-31 140.2 174 46.0
Actinidia34730 Actinidia chinensis HOM05D000139 ORTHO05D000103 4.5e-31 138.7 135 54.8
RcHm_v2.0_Chr1g0331851 Rosa chinensis HOM05D007308 ORTHO05D009157 1.3e-30 137.1 127 55.1
Manes.10G060700 Manihot esculenta HOM05D007308 ORTHO05D009157 3.3e-26 122.5 121 53.7
Potri.008G017701 Populus trichocarpa HOM05D007308 ORTHO05D009157 2.2e-22 109.8 82 58.5
Pp3c2_31450 Physcomitrium patens HOM05D007308 ORTHO05D009157 3.5e-20 102.4 115 48.7
Atru.BG.262.p Acer truncatum HOM05D007308 ORTHO05D009157 1.8e-19 100.1 80 63.8
BcaNung05151 Brassica carinata HOM05D007308 ORTHO05D009157 4.3e-18 95.5 142 45.1
CBR_g30213 Chara braunii HOM05D007308 ORTHO05D009157 2.1e-17 93.2 167 34.7
PGSC0003DMG400007605 Solanum tuberosum HOM05D000011 ORTHO05D000018 6.9e-08 61.6 45 57.8
Sopen11g002430 Solanum pennellii HOM05D000011 ORTHO05D000018 1.7e-06 57.0 71 40.8
Actinidia27055 Actinidia chinensis HOM05D007308 ORTHO05D009157 2.2e-06 56.6 88 42.0


User provided reference genes

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