Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO143G0243 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 8.3e-138 493.8 249 100.0
SMO334G0059 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 1.5e-59 233.8 251 59.0
SMO143G0192 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 7.2e-57 224.9 127 89.0
SMO265G0021 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 1.1e-54 217.6 127 87.4
SMO186G0008 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 4.3e-54 215.7 129 83.7
Nn4g23574 Nelumbo nucifera HOM05D006847 ORTHO05D008685 3.4e-22 109.8 106 49.1
TAR622G1172 Trochodendron aralioides HOM05D006847 ORTHO05D008685 3.4e-22 109.8 108 48.1
TAR374G0132 Trochodendron aralioides HOM05D006847 ORTHO05D008685 2.2e-21 107.1 111 45.0
SEGI_24845 Sequoiadendron giganteum HOM05D006847 ORTHO05D008685 1.1e-20 104.8 103 48.5
Dinv33999 Davidia involucrata HOM05D006847 ORTHO05D008685 3.1e-20 103.2 105 45.7
Migut.L01151 Erythranthe guttata HOM05D006847 ORTHO05D008685 4.1e-20 102.8 115 45.2
RcHm_v2.0_Chr4g0437071 Rosa chinensis HOM05D006847 ORTHO05D008685 4.1e-20 102.8 106 45.3
Ciclev10031661m.g Citrus clementina HOM05D006847 ORTHO05D008685 9.1e-20 101.7 102 47.1
Migut.N00803 Erythranthe guttata HOM05D006847 ORTHO05D008685 1.2e-19 101.3 113 46.9
Cc11_g11380 Coffea canephora HOM05D006847 ORTHO05D008685 1.6e-19 100.9 106 45.3
FvH4_4g28930 Fragaria vesca HOM05D006847 ORTHO05D008685 2.0e-19 100.5 106 44.3
Pp3c6_17060 Physcomitrium patens HOM05D006847 ORTHO05D008685 2.0e-19 100.5 102 48.0
CSS0010285 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 2.7e-19 100.1 107 44.9
Eucgr.G02408 Eucalyptus grandis HOM05D006847 ORTHO05D008685 2.7e-19 100.1 105 45.7
LjContig00408g0014580 Lotus japonicus HOM05D006847 ORTHO05D008685 2.7e-19 100.1 103 46.6
Actinidia24040 Actinidia chinensis HOM05D006847 ORTHO05D008685 3.5e-19 99.8 106 45.3
Potri.010G136300 Populus trichocarpa HOM05D006847 ORTHO05D008685 3.5e-19 99.8 109 43.1
PGR119G0337 Punica granatum HOM05D006847 ORTHO05D008685 4.5e-19 99.4 108 47.2
Lj3C1026T6 Lonicera japonica HOM05D006847 ORTHO05D008685 5.9e-19 99.0 103 44.7
ATR0691G250 Amborella trichopoda HOM05D006847 ORTHO05D008685 7.7e-19 98.6 103 44.7
Ca_22680_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 7.7e-19 98.6 103 47.6
Cfa008830 Carpinus fangiana HOM05D006847 ORTHO05D008685 1.0e-18 98.2 103 45.6
Medtr8g065720 Medicago truncatula HOM05D006847 ORTHO05D008685 1.0e-18 98.2 103 45.6
Pp3c27_4530 Physcomitrium patens HOM05D006847 ORTHO05D008685 1.0e-18 98.2 101 49.5
Duzib268G0361 Durio zibethinus HOM05D006847 ORTHO05D008685 1.3e-18 97.8 106 44.3
Potri.008G113000 Populus trichocarpa HOM05D006847 ORTHO05D008685 1.3e-18 97.8 103 45.6
SalBow2G2641 Salvia bowleyana HOM05D006847 ORTHO05D008685 1.3e-18 97.8 103 46.6
GSVIVG01010124001 Vitis vinifera HOM05D006847 ORTHO05D008685 1.3e-18 97.8 105 44.8
CiPaw.06G095800 Carya illinoinensis HOM05D006847 ORTHO05D008685 1.7e-18 97.4 101 48.5
MD13G1054900 Malus domestica HOM05D006847 ORTHO05D008685 1.7e-18 97.4 103 45.6
Oeu001640.1 Olea europaea HOM05D006847 ORTHO05D008685 1.7e-18 97.4 103 46.6
Solyc05g010640.3 Solanum lycopersicum HOM05D006847 ORTHO05D008685 1.7e-18 97.4 102 44.1
Manes.14G092000 Manihot esculenta HOM05D006847 ORTHO05D008685 2.3e-18 97.1 103 44.7
Nitab4.5_0000259g0050 Nicotiana tabacum HOM05D006847 ORTHO05D008685 2.3e-18 97.1 102 45.1
Pp3c5_12950 Physcomitrium patens HOM05D006847 ORTHO05D008685 2.3e-18 97.1 104 46.2
Atru.chr11.1527 Acer truncatum HOM05D006847 ORTHO05D008685 2.9e-18 96.7 103 43.7
COL.COLO4_27774 Corchorus olitorius HOM05D006847 ORTHO05D008685 2.9e-18 96.7 103 44.7
Haze_11844 Corylus avellana HOM05D006847 ORTHO05D008685 2.9e-18 96.7 103 46.6
ECA233G1196 Erigeron canadensis HOM05D006847 ORTHO05D008685 2.9e-18 96.7 108 44.4
HanXRQChr08g0215061 Helianthus annuus HOM05D006847 ORTHO05D008685 2.9e-18 96.7 108 44.4
Hma1.2p1_1348F.1_g277280 Hydrangea macrophylla HOM05D006847 ORTHO05D008685 2.9e-18 96.7 102 47.1
Psat4g123400 Pisum sativum HOM05D006847 ORTHO05D008685 2.9e-18 96.7 103 45.6
MD16G1053800 Malus domestica HOM05D006847 ORTHO05D008685 3.8e-18 96.3 103 44.7
Mapoly0024s0128 Marchantia polymorpha HOM05D006847 ORTHO05D008685 3.8e-18 96.3 105 45.7
MSTRG.7721 Avicennia marina HOM05D006847 ORTHO05D008685 8.6e-18 95.1 100 46.0
Sopen05g006440 Solanum pennellii HOM05D006847 ORTHO05D008685 8.6e-18 95.1 102 43.1
Thecc.02G320200 Theobroma cacao HOM05D006847 ORTHO05D008685 8.6e-18 95.1 106 43.4
MBI14_g08222_MAGBIO Magnolia biondii HOM05D006847 ORTHO05D008685 1.1e-17 94.7 103 40.8
Glyma.02G124600 Glycine max HOM05D006847 ORTHO05D008685 1.5e-17 94.4 103 44.7
Peaxi162Scf00188g00923 Petunia axillaris HOM05D006847 ORTHO05D008685 1.5e-17 94.4 102 43.1
CSS0043445 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D000152 1.9e-17 94.0 102 45.1
CAN.G869.31 Capsicum annuum HOM05D006847 ORTHO05D008685 1.9e-17 94.0 102 43.1
Lj6C772T8 Lonicera japonica HOM05D006847 ORTHO05D008685 1.9e-17 94.0 103 44.7
PGSC0003DMG400019650 Solanum tuberosum HOM05D006847 ORTHO05D008685 1.9e-17 94.0 102 43.1
TWI75G1304 Tripterygium wilfordii HOM05D006847 ORTHO05D008685 1.9e-17 94.0 109 41.3
Aqoxy3G00572 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 2.5e-17 93.6 102 43.1
Lsat_1_v5_gn_8_36700 Lactuca sativa HOM05D006847 ORTHO05D008685 2.5e-17 93.6 108 42.6
Sopen01g032850 Solanum pennellii HOM05D006847 ORTHO05D008685 2.5e-17 93.6 102 43.1
CANSAT64G2316 Cannabis sativa HOM05D006847 ORTHO05D008685 3.3e-17 93.2 105 42.9
Gohir.A03G107200 Gossypium hirsutum HOM05D006847 ORTHO05D008685 3.3e-17 93.2 105 42.9
ClCG05G023430 Citrullus lanatus HOM05D006847 ORTHO05D008685 4.2e-17 92.8 105 41.9
DCAR_023729 Daucus carota HOM05D006847 ORTHO05D008685 4.2e-17 92.8 103 44.7
Nitab4.5_0002309g0040 Nicotiana tabacum HOM05D006847 ORTHO05D008685 5.5e-17 92.4 114 41.2
HPP92_020537 Vanilla planifolia HOM05D006847 ORTHO05D008685 5.5e-17 92.4 103 45.6
MELO3C012175.2 Cucumis melo HOM05D006847 ORTHO05D008685 7.2e-17 92.0 105 41.9
Gorai.005G148200 Gossypium raimondii HOM05D006847 ORTHO05D008685 7.2e-17 92.0 105 41.9
CsaV3_5G033580 Cucumis sativus L. HOM05D006847 ORTHO05D008685 9.5e-17 91.7 105 41.9
arahy.Tifrunner.gnm1.ann1.B51XMH Arachis hypogaea HOM05D006847 ORTHO05D008685 1.2e-16 91.3 103 43.7
Aqoxy3G03766 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 2.1e-16 90.5 105 40.0
PGSC0003DMG400001803 Solanum tuberosum HOM05D006847 ORTHO05D008685 2.1e-16 90.5 102 44.1
HPP92_020469 Vanilla planifolia HOM05D006847 ORTHO05D008685 2.1e-16 90.5 112 41.1
FAN12G2539 Fragaria x ananassa HOM05D006847 ORTHO05D008685 6.1e-16 89.0 125 37.6
FAN17G2474 Fragaria x ananassa HOM05D006847 ORTHO05D008685 6.1e-16 89.0 125 37.6
Sed0008138 Sechium edule HOM05D006847 ORTHO05D008685 6.1e-16 89.0 105 41.0
Oeu021813.1 Olea europaea HOM05D006847 ORTHO05D008685 8.0e-16 88.6 102 43.1
arahy.Tifrunner.gnm1.ann1.9XA9EY Arachis hypogaea HOM05D006847 ORTHO05D008685 1.0e-15 88.2 103 42.7
Sed0007808 Sechium edule HOM05D006847 ORTHO05D008685 1.0e-15 88.2 105 40.0
FAN22G0943 Fragaria x ananassa HOM05D006847 ORTHO05D008685 1.4e-15 87.8 125 37.6
Lj2g0006896 Lotus japonicus HOM05D006847 ORTHO05D008685 2.3e-15 87.0 103 40.8
Medtr0328s0040 Medicago truncatula HOM05D006847 ORTHO05D008685 2.3e-15 87.0 103 42.7
TPR.G20006 Trifolium pratense HOM05D006847 ORTHO05D008685 2.3e-15 87.0 123 39.8
AagrBONN_evm.TU.Sc2ySwM_368.2780 Anthoceros agrestis HOM05D006847 ORTHO05D008685 6.8e-15 85.5 102 40.2
Ca_05192_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 6.8e-15 85.5 120 38.3
Pp3c3_23290 Physcomitrium patens HOM05D006847 ORTHO05D008685 8.9e-15 85.1 102 42.2
TPR.G29773 Trifolium pratense HOM05D006847 ORTHO05D008685 1.2e-14 84.7 121 38.8
Pp3c4_7760 Physcomitrium patens HOM05D006847 ORTHO05D008685 7.5e-14 82.0 102 42.2
Psat2g097480 Pisum sativum HOM05D006847 ORTHO05D008685 1.3e-13 81.3 103 38.8
CSS0029748 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 4.5e-11 72.8 136 32.4
HPP92_026164 Vanilla planifolia HOM05D006847 ORTHO05D008685 4.5e-11 72.8 92 39.1
Gohir.D02G132300 Gossypium hirsutum HOM05D006847 ORTHO05D008685 2.9e-10 70.1 89 39.3
arahy.Tifrunner.gnm1.ann1.UQ0TL8 Arachis hypogaea HOM05D006847 ORTHO05D008685 1.4e-07 61.2 94 38.3
AagrBONN_evm.TU.Sc2ySwM_117.3730 Anthoceros agrestis HOM05D006847 ORTHO05D008685 5.2e-07 59.3 73 39.7
Sabra10G0104900 Salix brachista HOM05D006847 ORTHO05D008685 5.2e-07 59.3 75 44.0


User provided reference genes

Program Settings