Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO143G0209 Selaginella moellendorffii HOM05D007582 ORTHO05D009645 1.3e-59 232.6 104 100.0
Nn5g28305 Nelumbo nucifera HOM05D007582 ORTHO05D009645 2.1e-28 129.0 111 51.4
Zm00001eb348620 Zea mays HOM05D007582 ORTHO05D009645 2.1e-28 129.0 106 53.8
Migut.N03282 Erythranthe guttata HOM05D007582 ORTHO05D009645 2.7e-28 128.6 99 54.5
AL1G52300 Arabidopsis lyrata HOM05D007582 ORTHO05D009645 3.5e-28 128.3 101 52.5
Atru.chr13.1488 Acer truncatum HOM05D007582 ORTHO05D009645 4.6e-28 127.9 104 51.9
Oeu028565.1 Olea europaea HOM05D007582 ORTHO05D009645 6.0e-28 127.5 112 48.2
CDE06G0523 Ceratophyllum demersum HOM05D007582 ORTHO05D009645 1.0e-27 126.7 111 50.5
Manes.18G077606 Manihot esculenta HOM05D007582 ORTHO05D009645 1.0e-27 126.7 109 50.5
THA.LOC104817375 Tarenaya hassleriana HOM05D007582 ORTHO05D009645 1.3e-27 126.3 108 50.0
Ciclev10002916m.g Citrus clementina HOM05D007582 ORTHO05D009645 1.8e-27 125.9 106 50.9
Hma1.2p1_0054F.1_g031010 Hydrangea macrophylla HOM05D007582 ORTHO05D009645 1.8e-27 125.9 104 51.0
CANSAT11G2348 Cannabis sativa HOM05D007582 ORTHO05D009645 2.3e-27 125.6 108 50.9
AT1G44414 Arabidopsis thaliana HOM05D007582 ORTHO05D009645 3.0e-27 125.2 101 50.5
Manes.02G163800 Manihot esculenta HOM05D007582 ORTHO05D009645 3.9e-27 124.8 112 48.2
BcaB07g33949 Brassica carinata HOM05D007582 ORTHO05D009645 5.1e-27 124.4 105 52.4
MELO3C010615.2 Cucumis melo HOM05D007582 ORTHO05D009645 5.1e-27 124.4 111 49.5
PGR042G2864 Punica granatum HOM05D007582 ORTHO05D009645 5.1e-27 124.4 109 49.5
HPP92_006841 Vanilla planifolia HOM05D007582 ORTHO05D009645 5.1e-27 124.4 115 50.4
Haze_00435 Corylus avellana HOM05D007582 ORTHO05D009645 6.7e-27 124.0 110 49.1
CARHR035920 Cardamine hirsuta HOM05D007582 ORTHO05D009645 8.7e-27 123.6 101 52.5
SalBow6G5334 Salvia bowleyana HOM05D007582 ORTHO05D009645 8.7e-27 123.6 103 51.5
ATR0584G060 Amborella trichopoda HOM05D007582 ORTHO05D009645 1.1e-26 123.2 113 46.9
CAN.G1040.1 Capsicum annuum HOM05D007582 ORTHO05D009645 1.5e-26 122.9 107 50.5
CAN.G1040.3 Capsicum annuum HOM05D007582 ORTHO05D009645 1.5e-26 122.9 107 50.5
ClCG08G005690 Citrullus lanatus HOM05D007582 ORTHO05D009645 1.5e-26 122.9 112 47.3
BcaC08g42847 Brassica carinata HOM05D007582 ORTHO05D009645 1.9e-26 122.5 101 51.5
C06p00630 Brassica napus HOM05D007582 ORTHO05D009645 1.9e-26 122.5 101 51.5
Dinv07214 Davidia involucrata HOM05D007582 ORTHO05D009645 1.9e-26 122.5 117 47.9
Aa31LG6G9350 Aethionema arabicum HOM05D007582 ORTHO05D009645 2.5e-26 122.1 101 51.5
BolC6t35199H Brassica oleracea HOM05D007582 ORTHO05D009645 2.5e-26 122.1 101 51.5
Prupe.1G495300 Prunus persica HOM05D007582 ORTHO05D009645 2.5e-26 122.1 111 49.5
PSO170G1805 Papaver somniferum HOM05D007582 ORTHO05D009645 3.3e-26 121.7 106 50.9
QL09p034466 Quercus lobata HOM05D007582 ORTHO05D009645 3.3e-26 121.7 110 47.3
CiPaw.05G221000 Carya illinoinensis HOM05D007582 ORTHO05D009645 4.3e-26 121.3 108 49.1
Thhalv10012348m.g Eutrema salsugineum HOM05D007582 ORTHO05D009645 4.3e-26 121.3 99 50.5
Sp1g33530 Schrenkiella parvula HOM05D007582 ORTHO05D009645 4.3e-26 121.3 101 50.5
Mapoly0085s0071 Marchantia polymorpha HOM05D007582 ORTHO05D009645 5.7e-26 120.9 119 46.2
Thecc.08G126100 Theobroma cacao HOM05D007582 ORTHO05D009645 5.7e-26 120.9 111 47.7
MSTRG.22408 Avicennia marina HOM05D007582 ORTHO05D009645 7.4e-26 120.6 106 48.1
A06p11790 Brassica napus HOM05D007582 ORTHO05D009645 9.6e-26 120.2 101 51.5
PSO528G0093 Papaver somniferum HOM05D007582 ORTHO05D009645 9.6e-26 120.2 106 50.0
Peaxi162Scf00051g00105 Petunia axillaris HOM05D007582 ORTHO05D009645 9.6e-26 120.2 98 53.1
Sc22g0004000 Simmondsia chinensis HOM05D007582 ORTHO05D009645 9.6e-26 120.2 106 50.0
Carub.0001s3518 Capsella rubella HOM05D007582 ORTHO05D009645 1.3e-25 119.8 105 50.5
Potri.002G083100 Populus trichocarpa HOM05D007582 ORTHO05D009645 1.3e-25 119.8 113 44.2
Solyc06g060300.1 Solanum lycopersicum HOM05D007582 ORTHO05D009645 1.3e-25 119.8 105 48.6
Nn1g00264 Nelumbo nucifera HOM05D007582 ORTHO05D009645 1.6e-25 119.4 108 49.1
TAR381G0802 Trochodendron aralioides HOM05D007582 ORTHO05D009645 1.6e-25 119.4 109 48.6
TWI34G1919 Tripterygium wilfordii HOM05D007582 ORTHO05D009645 2.8e-25 118.6 111 46.8
HanXRQChr15g0465231 Helianthus annuus HOM05D007582 ORTHO05D009645 3.7e-25 118.2 105 50.5
RhsimUnG0092400 Rhododendron simsii HOM05D007582 ORTHO05D009645 3.7e-25 118.2 118 44.1
MD15G1347500 Malus domestica HOM05D007582 ORTHO05D009645 4.8e-25 117.9 109 48.6
Sopen06g020420 Solanum pennellii HOM05D007582 ORTHO05D009645 4.8e-25 117.9 105 47.6
Aqoxy6G00171 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 6.2e-25 117.5 109 45.9
Nitab4.5_0003719g0010 Nicotiana tabacum HOM05D007582 ORTHO05D009645 8.2e-25 117.1 110 45.5
RcHm_v2.0_Chr6g0295891 Rosa chinensis HOM05D007582 ORTHO05D009645 1.1e-24 116.7 108 48.1
Cpa.g.sc64.90 Carica papaya HOM05D007582 ORTHO05D009645 1.4e-24 116.3 113 45.1
FAN15G1067 Fragaria x ananassa HOM05D007582 ORTHO05D009645 1.4e-24 116.3 106 48.1
PGSC0003DMG400041136 Solanum tuberosum HOM05D007582 ORTHO05D009645 1.4e-24 116.3 107 47.7
vmacro00836 Vaccinium macrocarpon HOM05D007582 ORTHO05D009645 1.4e-24 116.3 117 43.6
Cc10_g11990 Coffea canephora HOM05D007582 ORTHO05D009645 2.4e-24 115.5 114 45.6
CSS0038396 Camellia sinensis var. sinensis HOM05D007582 ORTHO05D009645 3.1e-24 115.2 118 44.9
DCAR_016167 Daucus carota HOM05D007582 ORTHO05D009645 3.1e-24 115.2 101 49.5
SGA_v2.0_scaffold28G11996 Striga asiatica HOM05D007582 ORTHO05D009645 6.9e-24 114.0 111 45.9
Lj4P628T29 Lonicera japonica HOM05D007582 ORTHO05D009645 1.2e-23 113.2 107 48.6
SHI08583 Sapria himalayana HOM05D007582 ORTHO05D009645 2.0e-23 112.5 112 44.6
Sed0002225 Sechium edule HOM05D007582 ORTHO05D009645 2.6e-23 112.1 110 43.6
CsaV3_6G034440 Cucumis sativus L. HOM05D007582 ORTHO05D009645 3.4e-23 111.7 100 49.0
Os05g0435400 Oryza sativa ssp. japonica HOM05D007582 ORTHO05D009645 5.8e-23 110.9 112 48.2
Duzib116G0545 Durio zibethinus HOM05D007582 ORTHO05D009645 1.0e-22 110.2 108 45.4
ECA233G1368 Erigeron canadensis HOM05D007582 ORTHO05D009645 3.8e-22 108.2 99 50.5
Lj1g0018777 Lotus japonicus HOM05D007582 ORTHO05D009645 3.8e-22 108.2 110 42.7
VMungo0647G1492 Vigna mungo HOM05D007582 ORTHO05D009645 3.8e-22 108.2 109 45.0
Lalb_Chr17g0343701 Lupinus albus HOM05D007582 ORTHO05D009645 5.0e-22 107.8 109 42.2
Gohir.D06G045500 Gossypium hirsutum HOM05D007582 ORTHO05D009645 8.4e-22 107.1 102 47.1
TPR.G25776 Trifolium pratense HOM05D007582 ORTHO05D009645 1.1e-21 106.7 111 42.3
Aqoxy6G00227 Aquilegia oxysepala HOM05D007582 ORTHO05D009645 3.2e-21 105.1 102 43.1
Pp3c19_19360 Physcomitrium patens HOM05D007582 ORTHO05D009645 3.2e-21 105.1 119 38.7
Glyma.14G150500 Glycine max HOM05D007582 ORTHO05D009645 4.2e-21 104.8 114 43.9
Gorai.010G050500 Gossypium raimondii HOM05D007582 ORTHO05D009645 4.2e-21 104.8 102 46.1
Gohir.A06G045000 Gossypium hirsutum HOM05D007582 ORTHO05D009645 5.5e-21 104.4 99 49.5
Medtr1g029990 Medicago truncatula HOM05D007582 ORTHO05D009645 5.5e-21 104.4 113 41.6
Phvul.008G160900 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 7.2e-21 104.0 109 45.0
Phvul.008G167875 Phaseolus vulgaris HOM05D007582 ORTHO05D009645 7.2e-21 104.0 109 45.0
Nn3g18690 Nelumbo nucifera HOM05D007582 ORTHO05D009645 4.6e-20 101.3 97 47.4
arahy.Tifrunner.gnm1.ann1.WSBZ3R Arachis hypogaea HOM05D007582 ORTHO05D009645 6.1e-20 100.9 74 54.1
Psat6g041680 Pisum sativum HOM05D007582 ORTHO05D009139 2.4e-16 89.0 95 40.0
Nitab4.5_0011334g0030 Nicotiana tabacum HOM05D007582 ORTHO05D009645 2.2e-14 82.4 69 52.2
AagrBONN_evm.TU.Sc2ySwM_362.2461 Anthoceros agrestis HOM05D007582 ORTHO05D009645 1.4e-11 73.2 65 47.7
AagrBONN_evm.TU.Sc2ySwM_362.1959 Anthoceros agrestis HOM05D007582 ORTHO05D009645 3.9e-11 71.6 67 44.8
Nn4g24512 Nelumbo nucifera HOM05D007582 ORTHO05D009645 2.8e-09 65.5 69 43.5
Aa31LG6G9370 Aethionema arabicum HOM05D007582 ORTHO05D009645 1.2e-07 60.1 99 35.4
Nn1g08790 Nelumbo nucifera HOM05D007582 ORTHO05D009645 1.2e-07 60.1 33 66.7


User provided reference genes

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