Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO143G0192 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 1.4e-69 266.2 131 100.0
SMO265G0021 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 4.3e-63 244.6 127 96.9
SMO186G0008 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 1.4e-61 239.6 129 92.2
SMO143G0243 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 1.2e-57 226.5 127 89.0
SMO334G0059 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 7.9e-33 144.1 81 85.2
TAR622G1172 Trochodendron aralioides HOM05D006847 ORTHO05D008685 2.1e-22 109.4 109 45.9
Nn4g23574 Nelumbo nucifera HOM05D006847 ORTHO05D008685 8.1e-22 107.5 108 46.3
SEGI_24845 Sequoiadendron giganteum HOM05D006847 ORTHO05D008685 2.4e-21 105.9 110 46.4
TAR374G0132 Trochodendron aralioides HOM05D006847 ORTHO05D008685 1.5e-20 103.2 107 43.9
Ciclev10031661m.g Citrus clementina HOM05D006847 ORTHO05D008685 2.6e-20 102.4 109 43.1
Dinv33999 Davidia involucrata HOM05D006847 ORTHO05D008685 2.6e-20 102.4 110 41.8
Eucgr.G02408 Eucalyptus grandis HOM05D006847 ORTHO05D008685 5.8e-20 101.3 110 42.7
LjContig00408g0014580 Lotus japonicus HOM05D006847 ORTHO05D008685 5.8e-20 101.3 103 46.6
Pp3c6_17060 Physcomitrium patens HOM05D006847 ORTHO05D008685 5.8e-20 101.3 107 46.7
Potri.008G113000 Populus trichocarpa HOM05D006847 ORTHO05D008685 2.9e-19 99.0 114 41.2
Nitab4.5_0000259g0050 Nicotiana tabacum HOM05D006847 ORTHO05D008685 3.8e-19 98.6 107 43.0
RcHm_v2.0_Chr4g0437071 Rosa chinensis HOM05D006847 ORTHO05D008685 3.8e-19 98.6 106 42.5
GSVIVG01010124001 Vitis vinifera HOM05D006847 ORTHO05D008685 3.8e-19 98.6 110 41.8
CAN.G869.31 Capsicum annuum HOM05D006847 ORTHO05D008685 4.9e-19 98.2 112 40.2
Duzib268G0361 Durio zibethinus HOM05D006847 ORTHO05D008685 6.5e-19 97.8 110 41.8
FvH4_4g28930 Fragaria vesca HOM05D006847 ORTHO05D008685 6.5e-19 97.8 115 40.9
Lj3C1026T6 Lonicera japonica HOM05D006847 ORTHO05D008685 6.5e-19 97.8 129 38.0
Potri.010G136300 Populus trichocarpa HOM05D006847 ORTHO05D008685 6.5e-19 97.8 114 40.4
Thecc.02G320200 Theobroma cacao HOM05D006847 ORTHO05D008685 6.5e-19 97.8 128 38.3
COL.COLO4_27774 Corchorus olitorius HOM05D006847 ORTHO05D008685 8.4e-19 97.4 116 40.5
Hma1.2p1_1348F.1_g277280 Hydrangea macrophylla HOM05D006847 ORTHO05D008685 8.4e-19 97.4 109 43.1
Actinidia24040 Actinidia chinensis HOM05D006847 ORTHO05D008685 1.1e-18 97.1 112 42.0
ATR0691G250 Amborella trichopoda HOM05D006847 ORTHO05D008685 1.1e-18 97.1 108 41.7
Cc11_g11380 Coffea canephora HOM05D006847 ORTHO05D008685 1.1e-18 97.1 106 43.4
CiPaw.06G095800 Carya illinoinensis HOM05D006847 ORTHO05D008685 1.4e-18 96.7 110 43.6
Ca_22680_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 1.9e-18 96.3 116 44.0
Manes.14G092000 Manihot esculenta HOM05D006847 ORTHO05D008685 1.9e-18 96.3 110 40.0
Migut.L01151 Erythranthe guttata HOM05D006847 ORTHO05D008685 2.5e-18 95.9 108 43.5
MD13G1054900 Malus domestica HOM05D006847 ORTHO05D008685 3.2e-18 95.5 109 41.3
Medtr8g065720 Medicago truncatula HOM05D006847 ORTHO05D008685 3.2e-18 95.5 116 42.2
Pp3c5_12950 Physcomitrium patens HOM05D006847 ORTHO05D008685 3.2e-18 95.5 104 45.2
CANSAT64G2316 Cannabis sativa HOM05D006847 ORTHO05D008685 4.2e-18 95.1 110 40.9
Cfa008830 Carpinus fangiana HOM05D006847 ORTHO05D008685 4.2e-18 95.1 109 41.3
Oeu001640.1 Olea europaea HOM05D006847 ORTHO05D008685 4.2e-18 95.1 108 42.6
Pp3c27_4530 Physcomitrium patens HOM05D006847 ORTHO05D008685 4.2e-18 95.1 101 47.5
MD16G1053800 Malus domestica HOM05D006847 ORTHO05D008685 5.5e-18 94.7 109 40.4
Atru.chr11.1527 Acer truncatum HOM05D006847 ORTHO05D008685 7.1e-18 94.4 110 39.1
Migut.N00803 Erythranthe guttata HOM05D006847 ORTHO05D008685 7.1e-18 94.4 106 45.3
CSS0010285 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 9.3e-18 94.0 105 41.9
Gorai.005G148200 Gossypium raimondii HOM05D006847 ORTHO05D008685 9.3e-18 94.0 128 36.7
Mapoly0024s0128 Marchantia polymorpha HOM05D006847 ORTHO05D008685 9.3e-18 94.0 108 42.6
SalBow2G2641 Salvia bowleyana HOM05D006847 ORTHO05D008685 9.3e-18 94.0 103 43.7
Haze_11844 Corylus avellana HOM05D006847 ORTHO05D008685 1.2e-17 93.6 109 42.2
Gohir.A03G107200 Gossypium hirsutum HOM05D006847 ORTHO05D008685 1.2e-17 93.6 116 39.7
PGR119G0337 Punica granatum HOM05D006847 ORTHO05D008685 1.2e-17 93.6 106 44.3
Solyc05g010640.3 Solanum lycopersicum HOM05D006847 ORTHO05D008685 1.2e-17 93.6 102 41.2
Nitab4.5_0002309g0040 Nicotiana tabacum HOM05D006847 ORTHO05D008685 1.6e-17 93.2 107 40.2
MELO3C012175.2 Cucumis melo HOM05D006847 ORTHO05D008685 2.1e-17 92.8 110 40.0
Psat4g123400 Pisum sativum HOM05D006847 ORTHO05D008685 2.1e-17 92.8 103 43.7
ClCG05G023430 Citrullus lanatus HOM05D006847 ORTHO05D008685 2.7e-17 92.4 110 39.1
CsaV3_5G033580 Cucumis sativus L. HOM05D006847 ORTHO05D008685 2.7e-17 92.4 110 40.0
TWI75G1304 Tripterygium wilfordii HOM05D006847 ORTHO05D008685 2.7e-17 92.4 115 38.3
ECA233G1196 Erigeron canadensis HOM05D006847 ORTHO05D008685 3.5e-17 92.0 103 43.7
MBI14_g08222_MAGBIO Magnolia biondii HOM05D006847 ORTHO05D008685 6.0e-17 91.3 108 37.0
Sopen05g006440 Solanum pennellii HOM05D006847 ORTHO05D008685 6.0e-17 91.3 102 40.2
MSTRG.7721 Avicennia marina HOM05D006847 ORTHO05D008685 7.9e-17 90.9 100 43.0
Peaxi162Scf00188g00923 Petunia axillaris HOM05D006847 ORTHO05D008685 7.9e-17 90.9 107 39.3
Aqoxy3G00572 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 1.0e-16 90.5 102 41.2
HanXRQChr08g0215061 Helianthus annuus HOM05D006847 ORTHO05D008685 1.0e-16 90.5 103 42.7
Glyma.02G124600 Glycine max HOM05D006847 ORTHO05D008685 1.3e-16 90.1 103 41.7
PGSC0003DMG400019650 Solanum tuberosum HOM05D006847 ORTHO05D008685 1.3e-16 90.1 102 40.2
CSS0043445 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D000152 1.8e-16 89.7 102 42.2
Lj6C772T8 Lonicera japonica HOM05D006847 ORTHO05D008685 1.8e-16 89.7 103 41.7
Sed0008138 Sechium edule HOM05D006847 ORTHO05D008685 1.8e-16 89.7 110 38.2
Sopen01g032850 Solanum pennellii HOM05D006847 ORTHO05D008685 2.3e-16 89.4 102 40.2
HPP92_020537 Vanilla planifolia HOM05D006847 ORTHO05D008685 2.3e-16 89.4 103 43.7
DCAR_023729 Daucus carota HOM05D006847 ORTHO05D008685 3.9e-16 88.6 103 41.7
Aqoxy3G03766 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 5.1e-16 88.2 108 37.0
Lj2g0006896 Lotus japonicus HOM05D006847 ORTHO05D008685 6.7e-16 87.8 103 39.8
arahy.Tifrunner.gnm1.ann1.B51XMH Arachis hypogaea HOM05D006847 ORTHO05D008685 8.7e-16 87.4 103 40.8
Lsat_1_v5_gn_8_36700 Lactuca sativa HOM05D006847 ORTHO05D008685 8.7e-16 87.4 103 40.8
PGSC0003DMG400001803 Solanum tuberosum HOM05D006847 ORTHO05D008685 8.7e-16 87.4 107 40.2
arahy.Tifrunner.gnm1.ann1.9XA9EY Arachis hypogaea HOM05D006847 ORTHO05D008685 1.9e-15 86.3 103 40.8
FAN12G2539 Fragaria x ananassa HOM05D006847 ORTHO05D008685 1.9e-15 86.3 134 35.1
FAN17G2474 Fragaria x ananassa HOM05D006847 ORTHO05D008685 1.9e-15 86.3 134 35.1
Medtr0328s0040 Medicago truncatula HOM05D006847 ORTHO05D008685 1.9e-15 86.3 119 38.7
Sed0007808 Sechium edule HOM05D006847 ORTHO05D008685 1.9e-15 86.3 109 36.7
Oeu021813.1 Olea europaea HOM05D006847 ORTHO05D008685 5.7e-15 84.7 102 40.2
Pp3c3_23290 Physcomitrium patens HOM05D006847 ORTHO05D008685 9.6e-15 84.0 108 39.8
AagrBONN_evm.TU.Sc2ySwM_368.2780 Anthoceros agrestis HOM05D006847 ORTHO05D008685 1.3e-14 83.6 102 39.2
FAN22G0943 Fragaria x ananassa HOM05D006847 ORTHO05D008685 1.3e-14 83.6 125 35.2
HPP92_020469 Vanilla planifolia HOM05D006847 ORTHO05D008685 2.8e-14 82.4 103 40.8
Pp3c4_7760 Physcomitrium patens HOM05D006847 ORTHO05D008685 8.2e-14 80.9 102 41.2
TPR.G29773 Trifolium pratense HOM05D006847 ORTHO05D008685 1.1e-13 80.5 121 36.4
TPR.G20006 Trifolium pratense HOM05D006847 ORTHO05D008685 2.4e-13 79.3 103 38.8
Ca_05192_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 5.3e-13 78.2 100 39.0
Psat2g097480 Pisum sativum HOM05D006847 ORTHO05D008685 6.9e-13 77.8 103 36.9
CSS0029748 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 4.2e-10 68.6 136 30.1
Gohir.D02G132300 Gossypium hirsutum HOM05D006847 ORTHO05D008685 1.2e-09 67.0 89 37.1
HPP92_026164 Vanilla planifolia HOM05D006847 ORTHO05D008685 2.7e-09 65.9 84 38.1
arahy.Tifrunner.gnm1.ann1.UQ0TL8 Arachis hypogaea HOM05D006847 ORTHO05D008685 4.3e-07 58.5 94 36.2
AagrBONN_evm.TU.Sc2ySwM_117.3730 Anthoceros agrestis HOM05D006847 ORTHO05D008685 7.4e-07 57.8 73 38.4
Sabra10G0104900 Salix brachista HOM05D006847 ORTHO05D008685 3.7e-06 55.5 75 40.0


User provided reference genes

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