Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 4.5e-152 541.2 267 100.0
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 4.6e-64 248.8 260 45.0
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 6.0e-64 248.4 264 44.3
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 2.5e-62 243.0 280 42.9
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 7.4e-62 241.5 281 42.3
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 7.4e-62 241.5 280 42.9
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 7.4e-62 241.5 280 43.6
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 1.3e-61 240.7 280 43.9
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 2.8e-61 239.6 280 42.5
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 3.7e-61 239.2 285 41.4
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 3.7e-61 239.2 280 41.4
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 4.8e-61 238.8 280 42.1
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 4.8e-61 238.8 280 42.5
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 1.1e-60 237.7 280 43.9
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 1.4e-60 237.3 280 42.1
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 1.8e-60 236.9 280 42.5
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 1.8e-60 236.9 280 41.4
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 2.4e-60 236.5 280 41.4
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 2.4e-60 236.5 280 42.5
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 3.1e-60 236.1 280 42.9
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 3.1e-60 236.1 280 42.5
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 4.0e-60 235.7 280 42.5
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 6.9e-60 235.0 280 41.1
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 9.0e-60 234.6 280 42.9
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 9.0e-60 234.6 280 42.1
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 9.0e-60 234.6 274 42.7
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 1.5e-59 233.8 280 42.9
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 1.5e-59 233.8 280 42.9
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 2.6e-59 233.0 279 41.2
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 2.6e-59 233.0 280 41.8
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 2.6e-59 233.0 280 42.1
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 3.4e-59 232.6 280 41.8
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 3.4e-59 232.6 280 41.4
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 4.5e-59 232.3 280 42.9
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 4.5e-59 232.3 280 41.8
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 4.5e-59 232.3 284 40.5
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 4.5e-59 232.3 260 43.5
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 4.5e-59 232.3 274 42.7
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 5.8e-59 231.9 280 40.4
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 7.6e-59 231.5 280 40.7
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 7.6e-59 231.5 260 43.5
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 7.6e-59 231.5 280 40.4
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 1.0e-58 231.1 280 42.5
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 1.0e-58 231.1 280 42.5
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 1.0e-58 231.1 280 40.0
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 1.3e-58 230.7 280 41.1
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 1.3e-58 230.7 280 40.7
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 1.7e-58 230.3 284 40.5
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 1.7e-58 230.3 280 41.4
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 2.2e-58 229.9 280 41.4
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 2.9e-58 229.6 280 40.4
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 2.9e-58 229.6 280 41.1
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 6.5e-58 228.4 279 40.1
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 6.5e-58 228.4 279 40.5
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 6.5e-58 228.4 281 40.9
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 6.5e-58 228.4 280 39.6
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 6.5e-58 228.4 280 39.6
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 8.4e-58 228.0 280 40.7
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 8.4e-58 228.0 280 39.3
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 8.4e-58 228.0 280 40.7
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 8.4e-58 228.0 280 41.1
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 1.1e-57 227.6 280 41.1
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 1.1e-57 227.6 281 40.9
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 1.1e-57 227.6 260 42.3
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 1.4e-57 227.3 284 39.4
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 4.2e-57 225.7 284 39.1
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 4.2e-57 225.7 280 40.0
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 4.2e-57 225.7 280 39.6
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 7.1e-57 224.9 280 38.9
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 1.2e-56 224.2 282 41.1
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 1.6e-56 223.8 280 39.6
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 2.1e-56 223.4 280 39.6
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 4.6e-56 222.2 280 38.9
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 4.6e-56 222.2 298 40.3
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 1.0e-55 221.1 280 38.6
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 1.3e-55 220.7 280 38.2
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 3.9e-55 219.2 280 41.1
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 3.9e-55 219.2 280 39.3
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 5.1e-55 218.8 283 37.5
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 2.5e-54 216.5 306 37.6
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 9.6e-54 214.5 280 36.4
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 3.7e-53 212.6 264 41.7
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 1.1e-52 211.1 264 41.3
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 2.4e-52 209.9 281 38.8
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 6.9e-52 208.4 281 38.4
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 1.2e-51 207.6 286 37.8
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 3.4e-51 206.1 281 38.4
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 3.8e-50 202.6 286 37.8
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 1.1e-49 201.1 280 38.9
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 4.6e-48 195.7 281 37.0
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 2.3e-47 193.4 284 37.7
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 3.0e-47 193.0 281 37.4
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 1.9e-46 190.3 246 40.7
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 1.8e-44 183.7 225 38.7
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 1.5e-43 180.6 407 28.7
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 2.0e-43 180.3 285 36.1
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 1.9e-41 173.7 272 36.8
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 8.8e-39 164.9 176 43.8
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 8.8e-39 164.9 263 32.7
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 5.7e-38 162.2 176 45.5
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 2.0e-35 153.7 156 46.8
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 5.9e-19 99.0 104 42.3
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 2.8e-13 80.1 78 43.6
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 1.8e-12 77.4 78 46.2
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 2.7e-11 73.6 104 37.5
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 5.9e-11 72.4 78 44.9
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 5.9e-11 72.4 78 44.9
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 5.9e-11 72.4 78 44.9


User provided reference genes

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